Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0635 ATGGCGAATCAGTTACTTCTTTTGTTGTTCCTTTTTGGGGCAATCTTTTGTGGGCAATCCAAGCTCATAGTGTATAACACCTCGCAGAGCATAGTTCCCGGTACGCTAAACGTTCATCTGGTTCCTCACACCCACGACGACGTTGGTTGGTTGAAGACAGTCGATCAGTACTACGTTGGCTCTAATAATTCGATTCAGGGAGCTTGTGCTTTTCTCCAGCTATGGTGTAGGGAACAGAGTGAAGCTGTTAAGCACATAGTTAAGCAACTTGTCAGTTCGGATCAATTAGAGCTCATTCAATTTACTTTTCTGTTTAGAACAATTTTAATTTTCTCCTTACTTGAGAAAGACAAGTTATTTGTCAAGTTTGGAGCGTTCCGGAAAGTATATTTTGACTCTCGCCATTCATCTGCAACACATTCCATAGACATGATTGATCAGACAACAATGGGACATCGGTTCCTGAAAGAGGAGTTTGGCGAGACTTGA 489 0.4192 MANQLLLLLFLFGAIFCGQSKLIVYNTSQSIVPGTLNVHLVPHTHDDVGWLKTVDQYYVGSNNSIQGACAFLQLWCREQSEAVKHIVKQLVSSDQLELIQFTFLFRTILIFSLLEKDKLFVKFGAFRKVYFDSRHSSATHSIDMIDQTTMGHRFLKEEFGET 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0635 162 SUPERFAMILY Glycoside hydrolase/deacetylase 25 161 IPR011330 GO:0005975
Lele05g0635 162 Gene3D Glycoside hydrolase 38, N terminal domain 13 102 IPR027291 -
Lele05g0635 162 PANTHER ALPHA-MANNOSIDASE 6 100 - -
Lele05g0635 162 Pfam Glycosyl hydrolases family 38 N-terminal domain 37 99 IPR000602 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0635 Lele-ChrLele05 3737856 3738919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0635 1 162 Glycoside Hydrolase AT5G13980 43.850 4.64e-39 138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0635 05 3737856 3738919 Lele07g0666 07 3799113 3800380 hybridization
Lele05g0635 05 3737856 3738919 Lele08g0468 08 2856161 2870783 hybridization