Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0453 ATGGTCACTGTGGAATCTGGATCGCGAAGTAGGGAAAAGGATGAATTACTTTCTGGAGGAGGTATTAGAGCACGTGTTCGACTTCGTGACGTCCCACCGGGACCGGAACGCGTTGTCTCTGGTGTGCAAAACGTGGTACAGAATAGAAAGATGCAGCCGGCAAAAGCGCTGGCGAAGAACCGGGTGGGATTGGAGGAGCTTAGGATGAAGAGGACGGTGGTCTCGGATGAGAGCCTGGAGCTACTTTCCCGTTCCTTCTTGAATTTCAAGTCTTTAGTTCTTGTGAGCTGTGAAGGGTTCACCACCGATGGCCTGGAAGCGATAGCTGCAAATTGCAAGTTTCTTAGAGAGCTGGACCTGCAAGAGAATGAAATTGAGGATCTCAAAGGCCAATGGCTAAGCTGCTTTCCTGATACTTGCACATCACTGGTCTCTCTCAATTTTGCTTGTCTCAAAGGAGAGATAAATTTGGGAGCTCTTGAAAGGCTTGTGGCCAGATCTCCTAACCTTAAGAGCTTAAGGTTAAATCCTGCTGTGCCCCTTGACACCCTCCAAAGGATATTGATGCGCGCACCTCAGCTAGTTGACTTAGGTACTGGGTCTTTTGTTCATGATCCAGATTCTGAGACATACGCCAAGCTCAAGAGTACCATTTTAAAGTGTAAATCAATAACCAGTTTGTCGGGGTTTTTGGAGGTTGCTCCTCTCTGCCTTCCTGCCATATATCCTATTCTCTCGAACTTGACTGCCTTGAATCTGAGCTATGCAGCAGGGATTGAGGGTAAATACCTGAGGAAACTAATTCGCCACTGCGGGAAACTTCAGCGATTATGGATACTGGATTGCGTTGGAGACAGAGGACTAAATGTTGTAGCTGCCACATGTAAAGATTTGCAAGAATTGAGGGTTTTTCCATGTGTTCCCTTCAGGGCTGGGGCTGGAGCTGTAACAGAAAAAGGACTCGTTGCTATATCAATGGGTTGTCCCAAGCTTCACTCACTGCTTTACTTTTGCCAACAGATGACTAATGCTGCCCTCATAACAGTGGCGAAACACTGCCCAAATTTTATCCGCTTTAGGTTGTGCATCCTGGAGCCCACGAAACCAGACCCGGACACATTGCAGCCACTGGATGAAGGTTTTGGGGCTATAGTACAGTCTAGCAGGCGACTCAAGCGGTTATCGCTCTCTGGTTTGTTGACCGATAAAGTCTTCCTTTACATAGGGATGTATGCTGAGCAGCTGGAAATGCTGTCTATTGCATTTGCCGGAGAGAGTGACAAGGGGATGCTATATGTGCTGAATGGATGCAAGAAGCTTAGGAAGCTTGAGATAAGAGATTGCCCTTTCGGCAACACGGCACTTCTAACGGACGTAGGGAAGTATGAATCAATGCGATCCCTTTGGATGTCGTCCTGCGAAGTGACCCTTGGAGCCTGCAAGTCACTGGCTCAGAAGATGTCAAGGCTAAATGTGGAGATCATAAATGAGAATGAACAGGAAGAGTGTAGTTTGGAGGATGGGCAGAGGGTAGAGAAGATGTACCTGTATCGAACTTTAGATGGGAAAAGAAAAGATGCGCCAGAATTTGTATGGACTCTGTAG 1605 0.4729 MVTVESGSRSREKDELLSGGGIRARVRLRDVPPGPERVVSGVQNVVQNRKMQPAKALAKNRVGLEELRMKRTVVSDESLELLSRSFLNFKSLVLVSCEGFTTDGLEAIAANCKFLRELDLQENEIEDLKGQWLSCFPDTCTSLVSLNFACLKGEINLGALERLVARSPNLKSLRLNPAVPLDTLQRILMRAPQLVDLGTGSFVHDPDSETYAKLKSTILKCKSITSLSGFLEVAPLCLPAIYPILSNLTALNLSYAAGIEGKYLRKLIRHCGKLQRLWILDCVGDRGLNVVAATCKDLQELRVFPCVPFRAGAGAVTEKGLVAISMGCPKLHSLLYFCQQMTNAALITVAKHCPNFIRFRLCILEPTKPDPDTLQPLDEGFGAIVQSSRRLKRLSLSGLLTDKVFLYIGMYAEQLEMLSIAFAGESDKGMLYVLNGCKKLRKLEIRDCPFGNTALLTDVGKYESMRSLWMSSCEVTLGACKSLAQKMSRLNVEIINENEQEECSLEDGQRVEKMYLYRTLDGKRKDAPEFVWTL 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0453 534 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 73 493 - -
Lele08g0453 534 SMART LRR_CC_2 437 462 IPR006553 -
Lele08g0453 534 SMART LRR_CC_2 328 352 IPR006553 -
Lele08g0453 534 SMART LRR_CC_2 86 111 IPR006553 -
Lele08g0453 534 SMART LRR_CC_2 271 294 IPR006553 -
Lele08g0453 534 Coils Coil 480 500 - -
Lele08g0453 534 Pfam Leucine Rich repeat 112 127 IPR001611 GO:0005515
Lele08g0453 534 Gene3D Ribonuclease Inhibitor 40 534 IPR032675 -
Lele08g0453 534 SUPERFAMILY RNI-like 54 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0453 Lele-ChrLele08 2780473 2783781 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0453 08 2780473 2783781 Lele08g0453 08 2780473 2783781 ECH
Lele05g0626 05 3697507 3699910 Lele08g0453 08 2780473 2783781 hybridization
Lele06g0441 06 2705162 2707548 Lele08g0453 08 2780473 2783781 hybridization