Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0441 ATGAATTACTTTCTGGAGGAGGTATTAGAGCACGTGTTCGACTTCTTGACGTCCCACCGGGACCGGAACGCGGTGTCTCTGGTGTGCAAAACGTGGTACAGAATAGAAAGATGTAGCCGGCAAAAGGTCTTCATAGGGAACTGTTACTCCATCAGCCCAGACAGGGTGATCCAGAGGTTTCCTAGACTTAAATCCCTGACTCTGAAGGGAAAGCCTCATTTTGCAGACTTCAATCTTGTTCCCCATGATTGGGGAGGCTTTGTTTACCCTTGGATTGAAGCGCTGGCGAAGAACCGGGTGGGATTGGAGGAGCTTAGGATGAAGAGGATGGTGGTCTCGGATGAGAGCCTGGAGCTACTTTCCCGTTCCTTCTTGAATTTCAAGTCGTTAGTTCTTGTGAGCTGTGAAGGCTTCACCACCGATGGCCTGGAAGCGATAGCTGCAAATTGCAAGTTTCTTAGAGAGCTGGACCTGCAAGAGAATGAAATTGAGGATCTCAAAGGCCAATGGCTAAGCTGCTTTCCTGATACTTGCACATCACTGGTCTCTCTCAATTTTGCTTGTCTCAAAGGAGAGATCAATTTGGGAGCTCTTGAAAGGCTTGTGGCCAGATCTCCTAACCTTAAAAGCTTAAGGTTAAATCCTGCTGTGCCCGTTGACACCCTCCAAAGGATATTGATGCGCGCACCTCAGCTAGTTGACTTAGGTACTGGGTCTTTTGTTCATGATCCAGATTCTGAGACATACGCCAAGCTCAAGAGTACCATTTTAAAGTGTAACGCAATAACCAGTTTGTCGGGGTTTTTGGAGGTTGCTCCTCGCTGCCTTCCTGCCATATATCCTATTCTCTCGAACTTGACTGCCTTGAATCTGAGCTATGCGGCAGGGATTGAGGGTAAAGACCTGAAGAAACTAATTCGCCACTGTGGGAAACTTCAGCGATTATGGATACTGGATTGCGTTGGAGACAGAGGACTAGATGTTGTAGCTGCCACATGTAAAGATTTGCAAGAATTGAGGGTTTTTCCATGTGTTTCCTTCAGGGCTGGGGCTGGAGCTGTAACAGAAAAGGGACTCGTTGCTATATCCAAGGGTTGTCCCAAGCTTCACTCACTACTTTACTTTTGCCAACAGATGACTAATGCTGCCCTCATAACAGTGGCGAAAAACTGCCCAAATTTTATCCGCTTTAGGTTGTGCATCCTGGAGCCCACGAAACCAGACCCGGACACATTGCAGCCACTGGATGAAGGTTTTGGGGCTATAGTACAGTCTAGCAGGCGACTCAAGCGGTTATCGCTCTCTGGTTTGTTGACCGATAAAGTCTTCCTTTACATAGGGATGTATGCAGAGCAGCTGGAAATGCTGTCTATTGCATTTGCCGGAGAGAGTGACAAGGGGATGCTATATGTGCTGAATGGATGCAAGAAGCTTAGGAAGCTTGAGATAAGAGATTGTCCTTTCGGCAACACGGCACTTCTAACGGACGTAGGGAAGTATGAATCAATGCGATCCCTTTGGATGTCGTCCTGCGAAGTGACCCTTGGAGCCTGCAAGTCACTGGCTCAGAAGATGTCAAGGCTAAATGTGGAGATCATAAATGAGAATGAACAGGAAGAGCGTAGTTTGGAGGATGGGCAGAGGGTAGAGAAGATGTACCTTTATCGAACTTTAGATGGGAAAAGAAAAGATGCGCCAGAATCTGTATGGACTCTGTAG 1719 0.4729 MNYFLEEVLEHVFDFLTSHRDRNAVSLVCKTWYRIERCSRQKVFIGNCYSISPDRVIQRFPRLKSLTLKGKPHFADFNLVPHDWGGFVYPWIEALAKNRVGLEELRMKRMVVSDESLELLSRSFLNFKSLVLVSCEGFTTDGLEAIAANCKFLRELDLQENEIEDLKGQWLSCFPDTCTSLVSLNFACLKGEINLGALERLVARSPNLKSLRLNPAVPVDTLQRILMRAPQLVDLGTGSFVHDPDSETYAKLKSTILKCNAITSLSGFLEVAPRCLPAIYPILSNLTALNLSYAAGIEGKDLKKLIRHCGKLQRLWILDCVGDRGLDVVAATCKDLQELRVFPCVSFRAGAGAVTEKGLVAISKGCPKLHSLLYFCQQMTNAALITVAKNCPNFIRFRLCILEPTKPDPDTLQPLDEGFGAIVQSSRRLKRLSLSGLLTDKVFLYIGMYAEQLEMLSIAFAGESDKGMLYVLNGCKKLRKLEIRDCPFGNTALLTDVGKYESMRSLWMSSCEVTLGACKSLAQKMSRLNVEIINENEQEERSLEDGQRVEKMYLYRTLDGKRKDAPESVWTL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0441 572 Pfam F-box 2 41 IPR041567 -
Lele06g0441 572 SUPERFAMILY RNI-like 16 531 - -
Lele06g0441 572 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 81 531 - -
Lele06g0441 572 FunFam Transport inhibitor response 1 41 572 - -
Lele06g0441 572 Pfam Transport inhibitor response 1 protein domain 61 107 IPR041101 -
Lele06g0441 572 Coils Coil 518 538 - -
Lele06g0441 572 FunFam Transport inhibitor response 1 1 40 - -
Lele06g0441 572 Gene3D Ribonuclease Inhibitor 41 572 IPR032675 -
Lele06g0441 572 Gene3D - 1 40 - -
Lele06g0441 572 SMART LRR_CC_2 366 390 IPR006553 -
Lele06g0441 572 SMART LRR_CC_2 124 149 IPR006553 -
Lele06g0441 572 SMART LRR_CC_2 309 332 IPR006553 -
Lele06g0441 572 SMART LRR_CC_2 283 308 IPR006553 -
Lele06g0441 572 SMART LRR_CC_2 475 500 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0441 Lele-ChrLele06 2705162 2707548 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0441 06 2705162 2707548 Lele06g0441 06 2705162 2707548 ECH
Lele06g0441 06 2705162 2707548 Lele07g0657 07 3754885 3757270 hybridization
Lele06g0441 06 2705162 2707548 Lele08g0453 08 2780473 2783781 hybridization