Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0626 ATGAATTACTTTCCGGAGGAGGTATTAGAGCACGTGTTCAACTTCGTGACGTCCCACCGGGACCGGAACGCGGTGTCTCTAGTGTGCAAAACGTGGTACAGAATAGAAAGATGCAGCCGGCGAAAGGTCTTCATAGGGAACTGTTACTCAATCAGCCCAGAGAGGGTGATCCAGATATTTCCTAGACTTAAATCCCTGACTCTGAAGGGAAAGCCTCATTTTGCAGACTTCAATCTTGTTCCCCATGACTGGGGAGGCTTTGTTTACCCTTGGATTGAAGCGCTGGCGAAGAACCGGGTGGGATTGGAGGAGCTTAGGATGAAGAGGATGGTGGTCTCGGATGAGAGCCTGGAGCTACTTTCCCGTTCCTTCTTGAATTTCAAGTCTTTAGTTCTTGTCAGCTGTGAAGGGTTCACCACCGATGGCCTGGCAGCGGTAGCTGCAAATTGCAAGTTTCTTAGAGAGCTGGACCTGCAAGAGAATGAAATTGAGGATCTCAAAGGCCAATGGCTAAGCTGCTTTCCTGATACTTGTACATCACTCGTCTCTCTCAATTTTGCTTGTCTCAAAGGAGAGATCAATTTGGGAGCTCTTGAAAGGCTCGTGGCCAGATCTCCTAACCTCAAGAGCTTAAGGTTAAATCCTTCTGTGCCCCCTGACACCCTCCAAAGGATATTGATGCGAGCACCTCAGCTAGTTGACTTAGGTACTGGGTCTTTTGTTCATGATCCCGATTCTGAGACATATGCCAAGCTCAAGAGTACCATTTTAAAGTGTAAATCAATAACCAGTTTGTCGGGTTTTTTGGAGGTTTCTCCTCGCTGCCTTCCTGCCATATATCCTATTTGCTCGAACTTGACCACCTTGAATCTGAGCTATGCAGCAGGGATTGAGGGTAAAGACATGAGAAAGCTAATTCGCCACTGTGGGAAACTTCAGCGATTATGGATACTGGATTGCATTGGAGACAGGGGGCTAGATGTTGTAGCTGCCACATGTAAAGATTTGCAAGAATTGAGGGTTTTTCCATGTGCTCCCTTCAGGGCTGGGTCTGGAGCTGTAACAGAAAAAGGACTCGTTGCTATATCATTGGGTTGCCCCAAGCTTCACTCACTGCTTTACTTTTGCCAACAGATGACTAATGCTGCCCTCATAACAGTGGCGAAGAACTGCCCAAATTTTATCCGCTTTAGGTTGTGCATCCTGGAGCCGACGAAACCTGACCCGGACACATTGCAGCCACTAGATGAAGGTTTTGGGGCAATAGTACAGTCTTGCAGGCGAATCAAGCGGTTATCACTCTCTGGTTTGTTGACTGATAAAGTCTTCCTATACATAGGGATGTATGGTGAGCAGCTGGAAATGCTGTCTATTGCATTTGCAGGAGAAAGTGACAAGGGGATGCTATATGTGCTGAATGGATGCAAGAAGCTTAGAAAGCTTGAGATAAGAGATTGCCCTTTCGGCAACACTGCACTTCTAACGGACGTAGGGAAGTATGAATCAATGCGATCCCTTTGGATGTCGTCCTGCGAAGTGACCCTTGGAGCCTGCAAGTCACTGGCTGAGAAGAGGCCAAGGCTAAATGTGGAGATCATAAATGAGAATGAACAGGAAGAGTGTAGTTTGGAGGATGCGCAGAGAGTAGAGAAGATGTACCTGTATCGAACTTTAGTTGGGAAAAGGAAAGATGCACCGGAATTTGTATGGACTCTGTAG 1719 0.4695 MNYFPEEVLEHVFNFVTSHRDRNAVSLVCKTWYRIERCSRRKVFIGNCYSISPERVIQIFPRLKSLTLKGKPHFADFNLVPHDWGGFVYPWIEALAKNRVGLEELRMKRMVVSDESLELLSRSFLNFKSLVLVSCEGFTTDGLAAVAANCKFLRELDLQENEIEDLKGQWLSCFPDTCTSLVSLNFACLKGEINLGALERLVARSPNLKSLRLNPSVPPDTLQRILMRAPQLVDLGTGSFVHDPDSETYAKLKSTILKCKSITSLSGFLEVSPRCLPAIYPICSNLTTLNLSYAAGIEGKDMRKLIRHCGKLQRLWILDCIGDRGLDVVAATCKDLQELRVFPCAPFRAGSGAVTEKGLVAISLGCPKLHSLLYFCQQMTNAALITVAKNCPNFIRFRLCILEPTKPDPDTLQPLDEGFGAIVQSCRRIKRLSLSGLLTDKVFLYIGMYGEQLEMLSIAFAGESDKGMLYVLNGCKKLRKLEIRDCPFGNTALLTDVGKYESMRSLWMSSCEVTLGACKSLAEKRPRLNVEIINENEQEECSLEDAQRVEKMYLYRTLVGKRKDAPEFVWTL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0626 572 Coils Coil 529 549 - -
Lele05g0626 572 FunFam Transport inhibitor response 1 41 572 - -
Lele05g0626 572 SMART fbox_2 4 43 IPR001810 GO:0005515
Lele05g0626 572 Pfam F-box 2 42 IPR041567 -
Lele05g0626 572 SMART LRR_CC_2 283 308 IPR006553 -
Lele05g0626 572 SMART LRR_CC_2 366 390 IPR006553 -
Lele05g0626 572 SMART LRR_CC_2 475 500 IPR006553 -
Lele05g0626 572 SMART LRR_CC_2 124 149 IPR006553 -
Lele05g0626 572 SMART LRR_CC_2 309 332 IPR006553 -
Lele05g0626 572 FunFam Transport inhibitor response 1 1 40 - -
Lele05g0626 572 Pfam Transport inhibitor response 1 protein domain 61 107 IPR041101 -
Lele05g0626 572 SUPERFAMILY RNI-like 16 531 - -
Lele05g0626 572 Gene3D - 1 40 - -
Lele05g0626 572 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 81 531 - -
Lele05g0626 572 Gene3D Ribonuclease Inhibitor 41 572 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0626 Lele-ChrLele05 3697507 3699910 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0626 05 3697507 3699910 Lele05g0626 05 3697507 3699910 ECH
Lele05g0626 05 3697507 3699910 Lele07g0657 07 3754885 3757270 hybridization
Lele05g0626 05 3697507 3699910 Lele08g0453 08 2780473 2783781 hybridization