Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0225 ATGGATGAAACTCCAGCACCCACGCTCGCCTCTTCTGCTATTCCGAATGGAATAGAGACTCGAACCCTACCTAGCTCGATGGACGCGTGGAAGATGGTTATAATATGGCTTCGTAGACACTTGTTTCATGCAAGTCATACATTGCCGCATTTGATGCATATGGCTGCCACATCACTCCACTTCAAGTTTCCGTACGTAGTTCATGCCCCGATTCCACAACCTTCTTTTCGCCTTGGCGCTAGCTTTGTTTGCAATCAAAGAGCAGAGGTTCTCATGGAGACTTCAGAGAAGCAGGTGATGGTGGTGGCAATCGACGAGTACGATCACAGCATCTACGCCCTCCAATGGACTCTCGATCATTTCTTCGCGAATGGTTCTAATTCTTCCTTCAAGCTCCTTCTCGTTCATGCCAAGCCTACTGCTGCTTCAGCTGTTGGCCTTGCTGGAACTGGAGCTGCTGATTTTTTGCCTGTAATCGATGCCGATTTGAGGAAGACTGCTGCCAGAGTCGTCGAAAAAGCTAAAGAAATCTGCGCTACTAAATCGTTAAATGATGTGGCAGTGGAACTGGTGGAAGGTGATGCAAGGAATGTTCTCTGTGATGCTGTAGAAAGACATCATGCTTCAATGTTGGTCGTGGGTAGTCATGGTTATGGAACTATAAAGAGGGCGGTTTTAGGTAGTACCATAGGTTCCTCGGGCGTTAGCGTTGTTCCCAATCAGAGTAGAAGAGAAGAGGTTTCCATGGCTACTTCAGAGAAGCAAGTGATGGTGGTGGGAATCGATGACTACGATCACAGCACCTACGCCCTCCAATGGACTCTGGATCATTTCTTCTCATCCGGTCCTAATCCTCTCTTCAAACTCGTTCTCGTCCATGCCAAGCCTTCTGCTACTTCCGTCGTTGGCCTTGCTGGCCCTGGAGCCGCTGATGTTTTGCCCATTGTTGATGCCGATCTGAGGCAGATTGCTGCCAGAGTTGTTCAACAAGCTAAAGAACTCTGCATCAGCAAATCGGGGAACGATGTTATGGTGGAAGTTGTGGAAGGTGATGCAAGAAATGTACTTTGCGATGCAATTGAAAGGCATCATGCTTCAATGCTGGTCGTGGGTAGTCATGGTTATGGAGCTATAAAAAGGGCGGTATTAGGTAGTGTAAGTGACTACTGTGCGCATCATGCTCACTGCACCGTGATGATAGTGAAGAAGCCAAAAACGAAACATTAA 1227 0.4768 MDETPAPTLASSAIPNGIETRTLPSSMDAWKMVIIWLRRHLFHASHTLPHLMHMAATSLHFKFPYVVHAPIPQPSFRLGASFVCNQRAEVLMETSEKQVMVVAIDEYDHSIYALQWTLDHFFANGSNSSFKLLLVHAKPTAASAVGLAGTGAADFLPVIDADLRKTAARVVEKAKEICATKSLNDVAVELVEGDARNVLCDAVERHHASMLVVGSHGYGTIKRAVLGSTIGSSGVSVVPNQSRREEVSMATSEKQVMVVGIDDYDHSTYALQWTLDHFFSSGPNPLFKLVLVHAKPSATSVVGLAGPGAADVLPIVDADLRQIAARVVQQAKELCISKSGNDVMVEVVEGDARNVLCDAIERHHASMLVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKTKH 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0225 408 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 100 230 - -
Lele08g0225 408 PRINTS Universal stress protein signature 362 374 IPR006015 -
Lele08g0225 408 PRINTS Universal stress protein signature 254 272 IPR006015 -
Lele08g0225 408 PRINTS Universal stress protein signature 380 402 IPR006015 -
Lele08g0225 408 Gene3D HUPs 84 231 IPR014729 -
Lele08g0225 408 Gene3D HUPs 241 408 IPR014729 -
Lele08g0225 408 Pfam Universal stress protein family 256 402 IPR006016 -
Lele08g0225 408 Pfam Universal stress protein family 99 229 IPR006016 -
Lele08g0225 408 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 249 408 - -
Lele08g0225 408 CDD USP_Like 257 401 - -
Lele08g0225 408 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 258 404 - -
Lele08g0225 408 CDD USP_Like 100 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0225 Lele-ChrLele08 1349553 1357595 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0225 08 1349553 1357595 Lele08g0225 08 1349553 1357595 ECH
Lele05g0401 05 2282199 2286238 Lele08g0225 08 1349553 1357595 hybridization
Lele06g0218 06 1324929 1333612 Lele08g0225 08 1349553 1357595 hybridization