Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0401 ATGGAGACTTCAGAGAAGCAAGTGATGGTGGCAGCAATCGACGAGTACGACCATAGCATCTACGCCCTCCAATGGACTCTCGATCATTTCTTCGCGAACGGTTCTAATTCTTCCTTCAAGCTCCTTCTTGTTCATGCCAAGCCTACTGCTGCTTCCGCTGTTGGCCTTGCTGGACCTGGAGCTGCTGATGTTTTGCCTGTCGTCGATGCCGATTTGAGGAAGATTGCTGCCAGAGTTGTTGAAAAAGCAAAAGAAATCTGCGCTGCTAAATCGATGAATGATGTTGCAGTGGAAGTAGTGGAAGGTGATGCAAGGAATGTTCTCTGTGATGCTGTAGAAAGACACCATGCTTCAATGTTGGTCGTGGGTAGTCATGGCTATGGAACTATAAAGAGGGCGGTTTTAGGTAGTACCTTCGGTTCATCTGGCTTTAGCGTTGTTTCCGATCAGAGTCGTAGAGCACAGGTTTCCATGGCTACTTCAGAGAAGCAAGTGGTGGTGGTGGGAATCGATGACTACGATCAGAGCACTTACGCCCTCCAATGGACTCTCCATCATTTCTTCGCATCCGGTCCTAACCCTCTCTTCAAGCTCGTTCTTGTCCATGCCAAGCCTTCTGCTACTTCCGTCGTTGGCCTTGCTGGCCCTGGAGCCGCTGATGTTTTGCCCATTGTTGATGCCGATCTGAGGCAGATTGCTGCCAGAGTTGTTCAACAAGTAAAGAACTGTGCACCAGCAAATTGGTGA 747 0.4926 METSEKQVMVAAIDEYDHSIYALQWTLDHFFANGSNSSFKLLLVHAKPTAASAVGLAGPGAADVLPVVDADLRKIAARVVEKAKEICAAKSMNDVAVEVVEGDARNVLCDAVERHHASMLVVGSHGYGTIKRAVLGSTFGSSGFSVVSDQSRRAQVSMATSEKQVVVVGIDDYDQSTYALQWTLHHFFASGPNPLFKLVLVHAKPSATSVVGLAGPGAADVLPIVDADLRQIAARVVQQVKNCAPANW 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0401 248 Gene3D HUPs 1 138 IPR014729 -
Lele05g0401 248 CDD USP_Like 9 138 - -
Lele05g0401 248 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 158 243 - -
Lele05g0401 248 Pfam Universal stress protein family 8 138 IPR006016 -
Lele05g0401 248 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 10 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0401 Lele-ChrLele05 2282199 2286238 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0401 05 2282199 2286238 Lele05g0401 05 2282199 2286238 ECH
Lele05g0401 05 2282199 2286238 Lele07g0421 07 2371840 2374423 hybridization
Lele05g0401 05 2282199 2286238 Lele08g0225 08 1349553 1357595 hybridization