Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0218 ATGCCTTGGGACAAAAGAAGGGACGATGGAAAGAGGAAGACCTTGGAGAGGAGAAAAACATTTGTCATTTGGGTTATTCCAGAAACACCAATTAGGAAAATTGCACTAGAAACCCAAGAGATCAAAGCCATGGAGATACTAAGGAGAGAGAGAACAAAAAAAGAAAAGATTTTGATTATCTATGCCCTGATCGGGGCATGTTCGGACGGTGTGGGAGTGAGCTTCGTTAATGAGGGCATTCTGATTCTGGGGTTGATAGTCTACTCTGCATTTCTTCAAGATCTTCTTGAAGCCAACCCCAGGCAGTTTCTTCTCCTGCCCTTGCATGTACTCCTGCTTTTGACAATTGAGCTGGTAATCTACTGTTTTGTTCACCCCATGGATGAAACTCCTGCACCCACGCTCGCCTCTCCTGCTATTCCGAATGGAATAGAGACTCGAACCCTACCTAGCTCGATGGACGCGTGGAAGATGGTTATAATATGGCTTCGTAGACACTTGTTTCATGCAAGTCATAACTTGCCGCATATGATGTATATGGCTGCCACATCACTCCTCTTCAAGTTCTTTGTTTGCAATCAAAGAGCAGAGGTTCTCATGGAGACTTCAGAGAAGCAGGTGATGGTGGTGGCAATCGACGAGTACGATCACAGCATCTACGCCCTCCAATGGACTCTCGACCATTTCTTCGCGAATGGTTCTAATTCTTCCTTCAAGCTCCTTCTCGTTCATGCGAAGCCTACTGCTGCTTCCGCTGTTGGCCTTGCTGGACCTGGAGCTGCTGATTTTTTGCCTGTCGTCGATGCCGATTTGAGGAAGATTGCTGCCAGAGTCGTCGAAAAAGCTAAAGAAATCTGCGCTACTAAATCGTTAAATGATGTGGCAGTGGAACTGGTGGAAGGTGATGCGAGGAATGTTCTCTGTGATGCTGTAGAAAGACATCAAGCTTCAATGTTGGTCGTGGGTAGTCATGGTTATGGAACTATAAAGAGGGCGGTTTTAGGTAGTGTTCCTCTCGCGTTAGCTGTTGTTTCCAATCAGAGTTTAAGAGCAGAGGTTTCCATGGCTACTTCAGAGAAGCAAGTGATGGTGGTGGGAATCGATGACTACGATCACAGCACCTACGCCCTCCAATGGACTCTGGATCATTTCTTCGCATCCGGTCCTAATCCTCTCTTCAAGCTTGTTCTCGTCCATGCCAAGCCTTCTGCTACTTCCGTCGTTGGCCTTGCTGGCCCTGGAGCCGCTGATGTTTTGCCCATTGTTGATGCCGATCTGAGGCAGATTGCTGCCAGAGTTGTTCAACAAGCTAAAGAACTCTGCACCAGCAAATCGGTGAACGATGTTATGGTGGAAGTTGTGGAAGGTGATGCAAGAAATGTACTTTGCGATGCAGTTGAAAGGCATCATGCTTCAATGCTGGTCGTGGGTAGTCATGGTTATGGAGCTATAAAAAGGGCGGTATTAGGTAGTGTAAGTGACTACTGCGCGCATCATGCTCACTGCACCGTGATGATAGTGAAGAAGCCAAAAACAAAACATTAA 1545 0.468 MPWDKRRDDGKRKTLERRKTFVIWVIPETPIRKIALETQEIKAMEILRRERTKKEKILIIYALIGACSDGVGVSFVNEGILILGLIVYSAFLQDLLEANPRQFLLLPLHVLLLLTIELVIYCFVHPMDETPAPTLASPAIPNGIETRTLPSSMDAWKMVIIWLRRHLFHASHNLPHMMYMAATSLLFKFFVCNQRAEVLMETSEKQVMVVAIDEYDHSIYALQWTLDHFFANGSNSSFKLLLVHAKPTAASAVGLAGPGAADFLPVVDADLRKIAARVVEKAKEICATKSLNDVAVELVEGDARNVLCDAVERHQASMLVVGSHGYGTIKRAVLGSVPLALAVVSNQSLRAEVSMATSEKQVMVVGIDDYDHSTYALQWTLDHFFASGPNPLFKLVLVHAKPSATSVVGLAGPGAADVLPIVDADLRQIAARVVQQAKELCTSKSVNDVMVEVVEGDARNVLCDAVERHHASMLVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKTKH 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0218 514 Pfam Universal stress protein family 207 338 IPR006016 -
Lele06g0218 514 Pfam Universal stress protein family 362 508 IPR006016 -
Lele06g0218 514 Gene3D HUPs 192 342 IPR014729 -
Lele06g0218 514 Gene3D HUPs 347 514 IPR014729 -
Lele06g0218 514 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 355 514 - -
Lele06g0218 514 PRINTS Universal stress protein signature 468 480 IPR006015 -
Lele06g0218 514 PRINTS Universal stress protein signature 486 508 IPR006015 -
Lele06g0218 514 PRINTS Universal stress protein signature 360 378 IPR006015 -
Lele06g0218 514 CDD USP_Like 208 342 - -
Lele06g0218 514 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 208 342 - -
Lele06g0218 514 CDD USP_Like 363 507 - -
Lele06g0218 514 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 364 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0218 Lele-ChrLele06 1324929 1333612 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0218 06 1324929 1333612 Lele06g0218 06 1324929 1333612 ECH
Lele06g0218 06 1324929 1333612 Lele07g0421 07 2371840 2374423 hybridization
Lele06g0218 06 1324929 1333612 Lele08g0225 08 1349553 1357595 hybridization