Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0146 ATGGTCGTCCCTCCTTCAAATTCCATGAGAACCAAGAAAACAAATGCGGTGGGAATTCCGACAGTGGACCTTTCCATGGAAAGGTCAAGGCTATCGGAATTGGTTGTAAAGGCCTGCGAGGAATATGGTTTCTTCAAGGCCGTAAACCACGGCGTGGCGAAGGAGGTCATTTCCAGATTGGAAAATGAAGGGATTGAATTCTTTTCCAAATCCACCCCAGAGAAGCGACAGGCAGGTCCGGCCACACCGTTTGGTTATGGTTGTCGAAACATAGGCCCCAATGGCGACACGGGTGACCTCGAGTATCTCCTCCTCCATTCAAATCCGCTCTCCATCTCTGACAGATCCAAAACAATCTCCAACAACCCTACCAACTTCAGTTGCGCGGTGAATGATTACATAGAAGCGGTAAGGGAAGTGGCGTGTGAGGTGGTGGATCTAGTGGCGGAGAGGCTGTGGGTCCCAGACAAGCAGGCGGTGAGCAAGCTGATCAGGGACGTGCAGAGTGACTCGGTGCTGAGGATCAATCACTACCCTCCAACCAAGAGCGGCAACAAGTGGGACCCGTCGATCGGGTTCGGGGAGCATTCTGACCCTCAGATACTGACGATCCTACGGTCCAACGAGGTCGGGGGACTCCAGATCTGCACGGAGGACGGGCTCTGGATCCCGGTGGCCCCAGACCCCGATGCGTTCTTCGTCATGGTGGGCGATGCCCTCCAGGTGATGACGAATGGGAGACTGAGGAGCGTGAGGCACAGAGTAATGAGGAACACGGTAAGGGAGGGAAGAATGTCGATGATGTACTTTGCGGCACCGCCGCTGAGCTCGTGGATAACGCCGCTGCCAAAGACGGTGTCGGATGAGAAGCCAAGCGAGTACAGGCCCTTCACCTGGGCTCACTACAAGCAGGCCGCCTATTCCCTCCGCCTCGGCCACTCTCGCCTCGATCTCTTCCGCTCTAAACACCCCCTCCTTCTATAG 984 0.5549 MVVPPSNSMRTKKTNAVGIPTVDLSMERSRLSELVVKACEEYGFFKAVNHGVAKEVISRLENEGIEFFSKSTPEKRQAGPATPFGYGCRNIGPNGDTGDLEYLLLHSNPLSISDRSKTISNNPTNFSCAVNDYIEAVREVACEVVDLVAERLWVPDKQAVSKLIRDVQSDSVLRINHYPPTKSGNKWDPSIGFGEHSDPQILTILRSNEVGGLQICTEDGLWIPVAPDPDAFFVMVGDALQVMTNGRLRSVRHRVMRNTVREGRMSMMYFAAPPLSSWITPLPKTVSDEKPSEYRPFTWAHYKQAAYSLRLGHSRLDLFRSKHPLLL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0146 327 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 168 273 IPR005123 -
Lele08g0146 327 FunFam Gibberellin 2-beta-dioxygenase 2 3 310 - -
Lele08g0146 327 Gene3D - 2 310 IPR027443 -
Lele08g0146 327 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 84 IPR026992 -
Lele08g0146 327 SUPERFAMILY Clavaminate synthase-like 11 312 - -
Lele08g0146 327 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 304 - -
Lele08g0146 327 Pfam 2OG-Fe(II) oxygenase superfamily 170 272 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0146 Lele-ChrLele08 887250 890054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0146 5 320 Glycosyltransferase AT5G59530 29.412 3.81e-29 113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0146 08 887250 890054 Lele08g0146 08 887250 890054 ECH
Lele05g0325 05 1853377 1855674 Lele08g0146 08 887250 890054 hybridization
Lele06g0143 06 865848 868588 Lele08g0146 08 887250 890054 hybridization