Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0143 ATGGTCGTCCCTCCTTCAAATTCCATGAGAACCAAGAAAACAAATGCGGTGGGAATTCCGACAGTGGACCTTTCCATGGAAAGGTCAAGGCTATCGGAATTGGTTGTAAAGGCCTGCGAGGAATATGGTTTCTTCAAGGCCGTAAACCACGGCGTGGCGAAGGAGGTCATTTCCAGATTGGAAAATGAAGGGATTGAATTCTTTTCCAAATCCATCCCAGAGAAGCTACAGGCCGGTCCGGCCACACCGTTTGGTTATGGTTGTCGAAACATAGGCCCCAATGGCGACACGGGTGACCTCGAGTATCTCCTTCTCCATACAAATCCGCTCTCCATCTCTGACAGATCCAAGACAATCTCCAACAACCCTACCAACTTCAGTTGCGCGGTGAACGATTACATAGAAGCGGTAAGGGAAGTGGCGTGTGAGGTGGTGGATCTAGTGGCGGAGGGGCTGTGGGTCCCAGACAAGCACGCGGTGAGCAAGCTGATCAGGGACGTGCAGAGCGACTCGGTGCTGAGGATCAATCACTACCCTCCAACCAAGAGCGGTAGCAAGTGGGACCCGTCGATCGGGTTCGGGGAGCATTCTGACCCTCAGATACTGACGATCCTACGGTCCAACGAGGTCGGGGGACTCCAGATCTGCACGGAGGACGGGCTCTGGATACCGGTGGCCCCAGACCCCGATGCGTTCTTCGTCATGGTGGGCGATGCCCTCCAGGTGATGACGAATGGGAGACTGGGGAGCGTGAGGCACAGAGTAATGAGGAACACGGTAAGGGAGGGAAGAATGTCGATGATGTACTTTGCGGCACCGCCGCTGAGCTCGTGGATAACGCCGCTGCCAAAGACGGTGTCGGATAAGAAGCCGAGCGAGTACAGACCCTTCACCTGGGCTCACTACAAGCAGGCCGCCTATTCCCTCCGCCTCGGCCACTCTCGCCTCGATCTCTTCCGCTCTAAACACCCCCTCCTTCTATAG 984 0.5559 MVVPPSNSMRTKKTNAVGIPTVDLSMERSRLSELVVKACEEYGFFKAVNHGVAKEVISRLENEGIEFFSKSIPEKLQAGPATPFGYGCRNIGPNGDTGDLEYLLLHTNPLSISDRSKTISNNPTNFSCAVNDYIEAVREVACEVVDLVAEGLWVPDKHAVSKLIRDVQSDSVLRINHYPPTKSGSKWDPSIGFGEHSDPQILTILRSNEVGGLQICTEDGLWIPVAPDPDAFFVMVGDALQVMTNGRLGSVRHRVMRNTVREGRMSMMYFAAPPLSSWITPLPKTVSDKKPSEYRPFTWAHYKQAAYSLRLGHSRLDLFRSKHPLLL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0143 327 FunFam Gibberellin 2-beta-dioxygenase 2 3 310 - -
Lele06g0143 327 Gene3D - 2 310 IPR027443 -
Lele06g0143 327 Pfam 2OG-Fe(II) oxygenase superfamily 170 272 IPR044861 -
Lele06g0143 327 SUPERFAMILY Clavaminate synthase-like 11 312 - -
Lele06g0143 327 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 83 IPR026992 -
Lele06g0143 327 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 168 273 IPR005123 -
Lele06g0143 327 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0143 Lele-ChrLele06 865848 868588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0143 5 320 Glycosyltransferase AT5G59530 29.003 1.01e-27 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0143 06 865848 868588 Lele06g0143 06 865848 868588 ECH
Lele06g0143 06 865848 868588 Lele07g0344 07 1904180 1907480 hybridization
Lele06g0143 06 865848 868588 Lele08g0146 08 887250 890054 hybridization