Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0325 ATGGCCTGCGAGGAATACGGTTTCTTCAAGGCGGTAAACCACGGAGTGCCGAAGGAGGTCATTTCCAGATTGGAAAATGAAGGGATCGAATTCTTCTCCAAATCCACCGCAGAGAAGCGACAGGCTGGTCCGGCCACACCGTTTGGTTATGGTTGTCGAAACATAGGCCCCAATGGCGACATGGGGGACCTCGAGTATCTCCTTCTTCATACAAATCCTCTCTCCATCTCTGACAGATCCAAAACAATCTCCAACGACCCCGCCAACTTCAGTTGCGCGTTGAATGATTACGTAGAAGCTGTAAGGGAAGTGGCGTGTGAGGTGGTGGATCTAGTGGCGGAGGGGCTGTGGGTCCCAGACAAGTACGCGGTGAGCAAGCTGATTAGGGACGTGCAGAGCGACTCGGTGCGGAGGATCAATCACTACCCTCCAACGAAGAGCGGCAACCAGTGGGACCAGCCGATCGGGTTCGGCGAGCATTCAGACCCTCAGATACTAACTATCCTACGGTCCAACGAGGTGGGGGGACTCCAGATCTGCACGGAGGACGGGCTCTGGATCCCAGTGGCCCCAGACCCCCATGCGGTCTTCGTCATGGTGGGCGATGCCCTCCAGACTGAGGAGCGTGAGGCACAGAGTAATGAGGAACACGGTAGGGAAGGGAAGAATGTCGATGATGTACTTTGCGGCACCGCCGCTGAACTCGTGGATAAAGCCGCTGCCGAAGACGGTGTCGGCTGA 741 0.5628 MACEEYGFFKAVNHGVPKEVISRLENEGIEFFSKSTAEKRQAGPATPFGYGCRNIGPNGDMGDLEYLLLHTNPLSISDRSKTISNDPANFSCALNDYVEAVREVACEVVDLVAEGLWVPDKYAVSKLIRDVQSDSVRRINHYPPTKSGNQWDQPIGFGEHSDPQILTILRSNEVGGLQICTEDGLWIPVAPDPHAVFVMVGDALQTEEREAQSNEEHGREGKNVDDVLCGTAAELVDKAAAEDGVG 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0325 246 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 205 - -
Lele05g0325 246 Pfam 2OG-Fe(II) oxygenase superfamily 134 206 IPR044861 -
Lele05g0325 246 Gene3D - 1 214 IPR027443 -
Lele05g0325 246 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 132 246 IPR005123 -
Lele05g0325 246 MobiDBLite consensus disorder prediction 207 226 - -
Lele05g0325 246 MobiDBLite consensus disorder prediction 208 224 - -
Lele05g0325 246 Pfam non-haem dioxygenase in morphine synthesis N-terminal 2 47 IPR026992 -
Lele05g0325 246 SUPERFAMILY Clavaminate synthase-like 2 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0325 Lele-ChrLele05 1853377 1855674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0325 2 217 Glycosyltransferase AT5G59530 27.064 2.44e-15 72.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0325 05 1853377 1855674 Lele05g0325 05 1853377 1855674 ECH
Lele05g0325 05 1853377 1855674 Lele07g0344 07 1904180 1907480 hybridization
Lele05g0325 05 1853377 1855674 Lele08g0146 08 887250 890054 hybridization