Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0141 ATGGCCCCCGAGCTCGTCCCTACCGTAGTTAAATCCGGTGTCTTCCCCAGCCCGCCCGCCCTGCCGAGTCGCGCCTACGTCACGTTTCTTGCCGGAAATGGCGACTACGTCAAAGGAGTTGTGGGTTTGGCGAAGGGACTCAGGAAGGTGAGGTCGGCCTATCCGTTGGTGGTGGCCGTCCTCCCCGACGTTCCGGAGGAGCACCGCCGGATCTTGGAGTCTCAGGGCTGCATCGTACGCGAGATCGAACCCGTTTATCCTCCCGAGAACCAGACTCAATTCGCCATGGCCTATTACGTTATCAACTATTCTAAGCTCCGTATTTGGGAGTTCGTGGAATATGGCAAGATGATATATTTGGACGGAGACATTCAAGTGTACGACAACATTGACCACCTATTTGATCTGCCGGACGGACACTTCTACGCCGTCATGGACTGCTTCTGCGAGAAGACATGGAGTCACACCCCACAGTACAAGATCGGTTACTGCCAGCAATGCCCGGACAAGGTACAGTGGCCGGCCGAGATGGGCGAACCACCTGCTCTGTACTTCAACGCCGGCATGTTCGTGTTCGAGCCCGGAATGGAGACATACCACGATCTCTTGAAAACACTCCAGATCACTCCTCCCACACCTTTTGCAGAGCAAGATTTCTTGAACATGTACTTCAAGCCCATTTACAAACCTATTCCCTTGGTCTACAACCTCGTCCTGGCAATGTTGTGGCGCCACCCTGAGAATGTGGAACTCGACAGAGTCAAAGTTGTCCATTACTGCGCTGCGGGATCGAAGCCATGGAGATACACGGGGAAGGAAGAGAACATGGATAGAAAGGACATAAAGATGCTGGTTAAGAAATGGTGGGACATATACAACGACGAATCCTTGGATTACGACAAGGCCTTAAGTGGAGTCGAAGTCGATGCTGAATCAGTGGAAAGGGAATCACTGATAGCAGCAATGTCGGAGGCTGGTCAACTTCGGTATATAAAAGCCCCTTCTGCTGCTTAA 1014 0.5237 MAPELVPTVVKSGVFPSPPALPSRAYVTFLAGNGDYVKGVVGLAKGLRKVRSAYPLVVAVLPDVPEEHRRILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYGKMIYLDGDIQVYDNIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVQWPAEMGEPPALYFNAGMFVFEPGMETYHDLLKTLQITPPTPFAEQDFLNMYFKPIYKPIPLVYNLVLAMLWRHPENVELDRVKVVHYCAAGSKPWRYTGKEENMDRKDIKMLVKKWWDIYNDESLDYDKALSGVEVDAESVERESLIAAMSEAGQLRYIKAPSAA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0141 337 Pfam Glycosyl transferase family 8 28 270 IPR002495 GO:0016757
Lele08g0141 337 CDD GT8_Glycogenin 24 294 - -
Lele08g0141 337 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 296 IPR029044 -
Lele08g0141 337 FunFam Hexosyltransferase 22 300 - -
Lele08g0141 337 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 22 300 IPR029044 -
Lele08g0141 337 PANTHER GLYCOGENIN SUBFAMILY MEMBER 23 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0141 Lele-ChrLele08 860043 861366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0141 23 337 Glycosyltransferase AT1G56600 79.114 0.0 532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0141 08 860043 861366 Lele08g0141 08 860043 861366 ECH
Lele07g0340 07 1889720 1891146 Lele08g0141 08 860043 861366 ECH
Lele05g0322 05 1839996 1841432 Lele08g0141 08 860043 861366 hybridization
Lele06g0140 06 849696 851045 Lele08g0141 08 860043 861366 hybridization