Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0140 ATGGCCCCCGAACTCGTCCCTACCGTAGTTAAATCCGGTGTCTTCACCAGGCCGCCCACCCTGCCGAGTCGCGCCTACGTCACGTTTCTTGCCGGAAATGGCGACTACGTCAAAGGAGTTGTGGGTTTGGCGAAGGGACTCAGGAAGGTGAGGTCGGCGTATCCGTTGGTGGTGGCCGTCCTCCCCGACGTTCCGGAGGAGCAACGCCGGATCTTGGAGTCTCAGGGCTGCATCGTACGCGAGATCGAACCCGTTTATCCTCCCGAGAACCAGACTCAATTCGCCATGGCCTATTACGTTATCAACTATTCTAAGCTCCGTATTTGGGAGTTCGTGGAATATGGCAAGATGATATATTTGGACGGAGACATTCAAGTGTACGACAACATTGACCACCTATATGATCTGCCGGACGGACAATTCTACGCCGTCATGGACTGCTTCTGCGAGAAGACATGGAGCCACACCCCACAGTACAAGATCGGTTACTGCCAGCAATGCCCGGACAAGGTACAGTGGCCGGCCGAGATGGGCGAACCACCCGCTCTGTACTTCAACGCCGGCATGTTCGTGTTCGAGCCCGGCATGGACACATACCACGATCTCTTGAAAACACTCCAGATCACTCCTCCCACACCTTTTGCAGAGCAAGATTTCTTGAACATGTACTTCAAGCCCATTTACAAACCTATTCCCTTGGTCTACAACCTCGTCCTGGCATTGTTGTGGCGCCACCCTGAGAATGTGGAACTAGACAGAGTCAAAGTTGTCCATTACTGCGCTGCGGGATCGAAGCCGTGGAGATACACGGGGAAGGAAGAGAACATGGATAGAGAGGACATAAAGATGCTGATTAAGAAATGGTGGGAGATATACAACGACGAATCCTTGGATTACGACAAGGCCTTAAGTGGAGTTGAAGTCGATGCAGAATCAGTGAAAAGGGAATCATTGATAGCAGCAATGTCGGAGGCTGGTCAACTTCGGTATATAAAAGCCCCTTCTGCTGCTTAA 1014 0.5187 MAPELVPTVVKSGVFTRPPTLPSRAYVTFLAGNGDYVKGVVGLAKGLRKVRSAYPLVVAVLPDVPEEQRRILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYGKMIYLDGDIQVYDNIDHLYDLPDGQFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVQWPAEMGEPPALYFNAGMFVFEPGMDTYHDLLKTLQITPPTPFAEQDFLNMYFKPIYKPIPLVYNLVLALLWRHPENVELDRVKVVHYCAAGSKPWRYTGKEENMDREDIKMLIKKWWEIYNDESLDYDKALSGVEVDAESVKRESLIAAMSEAGQLRYIKAPSAA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0140 337 CDD GT8_Glycogenin 24 294 - -
Lele06g0140 337 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 296 IPR029044 -
Lele06g0140 337 FunFam Hexosyltransferase 22 300 - -
Lele06g0140 337 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 22 300 IPR029044 -
Lele06g0140 337 PANTHER GLYCOGENIN SUBFAMILY MEMBER 22 331 - -
Lele06g0140 337 Pfam Glycosyl transferase family 8 28 270 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0140 Lele-ChrLele06 849696 851045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0140 23 337 Glycosyltransferase AT1G56600 78.165 0.0 529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0140 06 849696 851045 Lele06g0140 06 849696 851045 ECH
Lele05g0322 05 1839996 1841432 Lele06g0140 06 849696 851045 ECH
Lele06g0140 06 849696 851045 Lele07g0340 07 1889720 1891146 hybridization
Lele06g0140 06 849696 851045 Lele08g0141 08 860043 861366 hybridization