Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0322 ATGGCCCCCGAACTCGTCCCTACCTTAGTTCAATCCGGTGTTATCACCGGCCCGGCCACCCTGCCGAGTCGCGCCTACGTCACATTTCTTGCCGGAAATGGTGACTACATCAAAGGCGTTGTGGGTCTGGCGAAGGGTCTGAGGGAGGTGAGGTCGGCGTATCCCTTGGTGGTGGCCGTCCTCCCCGACGTACCGGAGGAGCACCGTCGGATCTTGAAGTCCCAGGGCTGCATCGTGCTCGAGATCGAACCCGTTTATCCTCCCGAGAACCGGAGTCAGTTCGCCATGGCCTATTACGTCATCAACTACTCTAAGCTTCGTATTTGGGAGACATGGAGCCACACCCCGCAGTACAAGATCGGTTACTGCCAGCAATGCCCGGACAAGGTTCAATGGCCGGCTGACATGGGCGAACCGCCTGCTCTGTACTTCAACGCCGGCATGTTCGTGTTCGAGCCTAGCATGGAAACATACCACGATCTATTGAAAACACTCCAGATCACTACTCCCACGCCTTTTGCAGAGCAAGATTTCTTGAATATGTACTTCAAGCCCATTTACAAACCCATTCCCTTGGTCTACAACCTCGTCCTCGCAATGTTGTGGCGCCACCCTGAGAACGTGGAACTGGAGAAAGTCAAAGTTGTCCATTACTGTGCTGCGGGATCGAAGCCGTGGAGATACACGGGGAAGGAAGAGAACGTGGATAGAGAGGACATAAAGAAGCTGGTTAAGAAATGGTGGGACGTGTACAACGACGGATCCTTGGATTACGACAAGGGCAGAAGTGGAGTCGAAGGTGATGCTGAATCAGTGAAGAGGGAATCATTGATAGCAGCAATGTCGGAGGCTGGTCAACTTCGGTATATAACAGCCCCTTCTGCTGCTTAG 891 0.5354 MAPELVPTLVQSGVITGPATLPSRAYVTFLAGNGDYIKGVVGLAKGLREVRSAYPLVVAVLPDVPEEHRRILKSQGCIVLEIEPVYPPENRSQFAMAYYVINYSKLRIWETWSHTPQYKIGYCQQCPDKVQWPADMGEPPALYFNAGMFVFEPSMETYHDLLKTLQITTPTPFAEQDFLNMYFKPIYKPIPLVYNLVLAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGKEENVDREDIKKLVKKWWDVYNDGSLDYDKGRSGVEGDAESVKRESLIAAMSEAGQLRYITAPSAA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0322 296 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 21 121 IPR029044 -
Lele05g0322 296 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 122 256 IPR029044 -
Lele05g0322 296 FunFam Hexosyltransferase 110 259 - -
Lele05g0322 296 PANTHER GLYCOGENIN SUBFAMILY MEMBER 21 286 - -
Lele05g0322 296 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 253 IPR029044 -
Lele05g0322 296 CDD GT8_Glycogenin 24 253 - -
Lele05g0322 296 Pfam Glycosyl transferase family 8 122 229 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0322 Lele-ChrLele05 1839996 1841432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0322 1 296 Glycosyltransferase AT1G60470 62.757 6.48e-147 414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0322 05 1839996 1841432 Lele05g0322 05 1839996 1841432 ECH
Lele05g0322 05 1839996 1841432 Lele06g0140 06 849696 851045 ECH
Lele05g0322 05 1839996 1841432 Lele07g0340 07 1889720 1891146 hybridization
Lele05g0322 05 1839996 1841432 Lele08g0141 08 860043 861366 hybridization