Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0094 ATGGGAGTACATTCACTGACTGCATCACTCTTGCCGCTGTTAGTTAATTTTGCTCGTGATCTTGATGATGATGTGATAGAATTGAATGCAACGCTCGATATTTTTAAAGAAGTCGTCTCTGCCTATTTCGTGGATTTTCTATCTACCTGCTCACTTTCTTCTGCAAACATCACAACCATAATTCGTATTTCTCTTGGTCATTTTGCTCTGCAAATGTCGATAGCGAAGGAGCCAGAACAAGTGATGAAGTTGAGGGGAGGATCGGTGCTGGGAAAGAAGACCATTCTGAAGAGCGACCATTTCCCTGGTTGCCAGAACAAACGCTTGTCTCCTCAGATTGAAGGCGCTCCCAATTATCGTCAGGCTGACTCATTACATGTTCACGGTGTTGCAATCCCGACATTTGATGGAATCCAAAATGTTCTGAAGCATATTAGTGCTCAAAAAGAAGGGAAGAGAGTGCGAGTTCTTTGGATTAACCTTCGTGAAGAACCGGTCGTGTACATTAATGGGCGACCCTTTGTTTTGCGTGATGTGGAAAGGCCATTTTCCAACCTTGAGTATACGGGAATAAATAGGGAAAGGGTTGAACAAATGGAAGCTCGTTTGAAAGAAGATATCCTAATGGAAGCAGGAAGATATGGAAATAAAATCCTTGTGACTGATGAACTGCCAGATGGCCAGATGGTGGACCAGTGGGAACCAGTATCATGTAATTCAGTGAAAACACCACTAGAGGTGTATGAGGAATTGCAAGCAGAGGGTTACCATGTTGATTATGAACGTGTTCCTATAACTGACGAAAAATCACCAAAAGAACTGGATTTTGACTTTTTGGTTCATAAAATTTCTCAAGCTGATGTAAATACAGAAATTGTTTTTAATTGTCAAATGGGGCGTGGACGAACTACAACAGGAATGGTCATTGCAACTTTAATTTACCTTAACAGAATTGGAGCTTCAGGTATTCCAAGAAGCAATTCTGTTGGTAAGATTTTTCAGTGTGCCACTAATGTGGCTGATCATTTACCTGACTCGGAGGAGGCAGTTTGCAGAGGAGAATATGCAGTCATAAGAAGTCTGATTCGTGTATTAGAGGGTGGTGTTGAGGGGAAGAGACAAGTGGACAAAGTTATCGATAAGTGTGCCTCAATGCAGAATTTGCGTGAAGCAATTGCCACCTATCGCAACAGCATTCTGTGTCAACCAGATGAAAAGAAAAGGGAGTCATCACTTTCTTTTTTTGTGGAGTACTTGGAGAGATACTACTTCTTAATATGTTTTGCTGTATATATTCATTCAGAAAGGGCTGCACTTAATTCTAATTTTATCAGTCACAGCAGTTTTGCTGACTGGATGAGAGCTAGGCCAGAACTGTACAGTATTATTCGGAGGTTGCTCAGGAGAAATCCAATGGGGGCGCTTGGATATTCCAGTTTGAAGCCATCTCTAAAGAAGATAGCTGAATCTACCGATGGCCGTCCTTCTGAGATGGGTGTGGTTGCTGCTTTGAGGAATGGTGAAGTTCTTGGTCGTCAAACTGTTCTAAAAAGTGATCATTGTCCTGGTTGTCAAAACCCAAGTTTACCAGAAAGAGTGGAGGGGGCACCAAATTTCAGAGAAGTAACTGGGTTTCCGGTTTTTGGGGTGGCAAACCCAACCATTGATGGTATTCGATCTGTCATTCGTAGGATTGGTAGCTCTAAAGGGGGACGCCCTGTACTTTGGCATAACATGAGAGAAGAACCTGTTATTTACATTAATGGAAAACCATTTGTTCTCCGGGAACTTGAAAGACCATACAAAAACATGTTGGAGTACACGGGAATTGATCGTGAAAGAGTGGAGAAAATGGAAGCTCGGTTGAAAGAAGATATCCTACGGGAAGCTGAACACTATGGCAGTGCTGTATTGGTTATTCACGAAACAGATGATGGGCAAATATTCGATGCTTGGGAGGATGTCACATCTCATTCAATTCAAACCCCACTTGAAGTTTTTAAAAGCCTGCAGGCTGATGGTTTTCCTATTAAGTACGCACGTGTGCCCATCACTGATGGTAAAGCTCCTAAAAGTTCTGACTTTGACACAGTGGCTGTTAATATAGCATCTTCTCCGAAGGACACTGCTTTTGTTTTCAACTGTCAGATGGGTAGAGGTAGGACAACCACTGGCACTGTCATAGCTTGTCTTGTTAAACTTAGAATTAATTATGGGAGGCCCATCAAAATCCTGGTTGACAACTTGGGCGTAGCCCATGAAGAAGTGAATGGTGGTTTCTCAAGTGGAGATGAAACAGGGGTTGACATTAATGCATTAACCTCCGATGCTTCTCTAATTAAAAGGGATGAGAAACAAAGTCACGTGTTTGGTATTAATGACATTCTCTTGTTATGGAAGATAACAACATTATTTGATAATGGGGTGGAATGCCGGGAGGCCTTAGATGCTATTATTGATAGATGTTCTGCACTTCAAAACATACGTCAAGCTGTTCTGCTATATAGAAGAGTATTCAATCAACAGCATGTTGAGCCTAGAGTAAGGAGGTTGGCCTTGAATCGTGGTGCTGAGTACCTGGAACGGTACTTCCGCCTCATTGCTTTTGCTGCATATCTTGGAAGCGAAGCTTTTGATGGTTTTTGTGGCCAAGGAGAATCCAAAATGACATTTAAGACCTGGTTGCATAGGAGGCCAGAGGTGCAGGCTATGAAATGGAGCATCAGACTCAGACCAGGACGATTTTTCTCTGTCCCGGAAGGGTTGAGAGCACCACAAGAGCCTCAGCATGGAGATGCAGTAATGGAGGCAATTGTCAAGGACCGGAATGGTTCTGTTTTGGGGAAAGGCTCCATACTTAAAATGTATTTTTTTCCTGGTCAGAGAACTTCCAGCCACATACAAATACAGGGTGCACCAAATGTTTACAAGGTTGATGAATACCCTGTGTATAGCATGGCAACTCCAACCATCTCTGGTGCCAAGGACATGCTAGCATATTTATGTGCTAAGCCTAAATCAGGAGCTTCGGAAGCTTCAATTTCTCAAAAAGTTGTATTGACTGATCTGAGGGAGGAAGCAGTTGTTTATTTTGATGGTAACCCCTTTGTCTGGCGGGAGTTGAACAAACCTGTTGATACACTCAAGCATGTGGGAATCACTGGTCCTGTGGTGGAGCACATGGAGGTACGGCTAAAAGAAGATATAATTGCAGAGATTAGAAAGTCTGGTGGGCGAATGCTACTACATCGTGAGGAGTATAACCCTTCAACTAATCAGTCTGGTGTGGTTGGATACTGGGAAAACATTTCAGCAGATGATGTCAAGACACCTGCAGAAGTTTATTCATCTTTGAAAAATGATGGATATGATATTGTCTACCGGAGGATTCCATTAACAAGAGAGAGAGACGCCTTAGCCTCTGACATAGATGCAATTCAGTATTGTGAAGATGACTCTGCAGGTAGTTACCTATTCTTGTCGCACACAGGTTTTGGTGGAGTTGCATATGCAATGGCGATCATGTGCATTAAACTAGGAGCAGTGACAAACTTAGAATCTAAAATCTCACGACCGTTGTATTGTCCTCACATACATCCAATGGTTCTTCAAGAGAACATGCCTCCCCGAGCTTCTAATGAGGAGGCATTTAGGATGGGTGACTACCGTGACATATTAAGCCTAACAAGAGTACTTATGCGTGGTCCCCAAAGCAAAGCAGACGTTGACATTATTATTGAAAGGTGTGCAGGGGCAGGGCATTTGCGGGATGGTATTATGTATTATAGGAAAGAATTTGAGAAGTTCACTGATGGTGATGACGAGGAACGTGCTCATCTTATGGACATGGGTGTCAAGGCTCTGAGGCGGTATTTTTTCCTTATCACATTCAGATCCTACCTTTACTGCACCTCTCCTGCCAAGATGGAATTTGCCGCATGGATGGATGCAAGACCTGAGCTTGGTCATCTATGTAGCAATCTCAGAATCGATAAATAA 3999 0.4276 MGVHSLTASLLPLLVNFARDLDDDVIELNATLDIFKEVVSAYFVDFLSTCSLSSANITTIIRISLGHFALQMSIAKEPEQVMKLRGGSVLGKKTILKSDHFPGCQNKRLSPQIEGAPNYRQADSLHVHGVAIPTFDGIQNVLKHISAQKEGKRVRVLWINLREEPVVYINGRPFVLRDVERPFSNLEYTGINRERVEQMEARLKEDILMEAGRYGNKILVTDELPDGQMVDQWEPVSCNSVKTPLEVYEELQAEGYHVDYERVPITDEKSPKELDFDFLVHKISQADVNTEIVFNCQMGRGRTTTGMVIATLIYLNRIGASGIPRSNSVGKIFQCATNVADHLPDSEEAVCRGEYAVIRSLIRVLEGGVEGKRQVDKVIDKCASMQNLREAIATYRNSILCQPDEKKRESSLSFFVEYLERYYFLICFAVYIHSERAALNSNFISHSSFADWMRARPELYSIIRRLLRRNPMGALGYSSLKPSLKKIAESTDGRPSEMGVVAALRNGEVLGRQTVLKSDHCPGCQNPSLPERVEGAPNFREVTGFPVFGVANPTIDGIRSVIRRIGSSKGGRPVLWHNMREEPVIYINGKPFVLRELERPYKNMLEYTGIDRERVEKMEARLKEDILREAEHYGSAVLVIHETDDGQIFDAWEDVTSHSIQTPLEVFKSLQADGFPIKYARVPITDGKAPKSSDFDTVAVNIASSPKDTAFVFNCQMGRGRTTTGTVIACLVKLRINYGRPIKILVDNLGVAHEEVNGGFSSGDETGVDINALTSDASLIKRDEKQSHVFGINDILLLWKITTLFDNGVECREALDAIIDRCSALQNIRQAVLLYRRVFNQQHVEPRVRRLALNRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESKMTFKTWLHRRPEVQAMKWSIRLRPGRFFSVPEGLRAPQEPQHGDAVMEAIVKDRNGSVLGKGSILKMYFFPGQRTSSHIQIQGAPNVYKVDEYPVYSMATPTISGAKDMLAYLCAKPKSGASEASISQKVVLTDLREEAVVYFDGNPFVWRELNKPVDTLKHVGITGPVVEHMEVRLKEDIIAEIRKSGGRMLLHREEYNPSTNQSGVVGYWENISADDVKTPAEVYSSLKNDGYDIVYRRIPLTRERDALASDIDAIQYCEDDSAGSYLFLSHTGFGGVAYAMAIMCIKLGAVTNLESKISRPLYCPHIHPMVLQENMPPRASNEEAFRMGDYRDILSLTRVLMRGPQSKADVDIIIERCAGAGHLRDGIMYYRKEFEKFTDGDDEERAHLMDMGVKALRRYFFLITFRSYLYCTSPAKMEFAAWMDARPELGHLCSNLRIDK 1332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0094 1332 SMART PTPlike_phytase_2 577 733 - -
Lele08g0094 1332 SMART PTPlike_phytase_2 159 314 - -
Lele08g0094 1332 SMART PTPlike_phytase_2 1021 1179 - -
Lele08g0094 1332 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 79 317 IPR029021 -
Lele08g0094 1332 FunFam Paladin isoform A 515 749 - -
Lele08g0094 1332 Gene3D Protein tyrosine phosphatase superfamily 516 742 IPR029021 -
Lele08g0094 1332 Gene3D Protein tyrosine phosphatase superfamily 94 334 IPR029021 -
Lele08g0094 1332 Gene3D Protein tyrosine phosphatase superfamily 954 1191 IPR029021 -
Lele08g0094 1332 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 937 1177 IPR029021 -
Lele08g0094 1332 CDD PTP_paladin 505 822 - -
Lele08g0094 1332 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 501 1250 - -
Lele08g0094 1332 CDD PTP_paladin 85 382 - -
Lele08g0094 1332 FunFam Paladin isoform A 95 338 - -
Lele08g0094 1332 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 501 735 IPR029021 -
Lele08g0094 1332 FunFam Paladin isoform B 954 1199 - -
Lele08g0094 1332 Pfam Inositol hexakisphosphate 577 733 - -
Lele08g0094 1332 Pfam Inositol hexakisphosphate 1022 1177 - -
Lele08g0094 1332 Pfam Inositol hexakisphosphate 159 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0094 Lele-ChrLele08 559713 570934 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0273 05 1548908 1557716 Lele08g0094 08 559713 570934 hybridization
Lele06g0093 06 572585 583640 Lele08g0094 08 559713 570934 hybridization