Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0273 ATGTCGATAGCGAAGGGGCCAGAACAAGTGATGAAGTTGAGGGGAGGATCGGTGCTGGGAAAGAAGGCCATTCTGAAGAGCGACCATTTCCCAGGTTGCCAGAACAAACGCTTGTCTCCTCAGATTGAAGGCGCTCCCAATTATCGTCAGGCTGACTCATTACATGTTCACGGTGTTGCAATCCCGACATTTGATGGAATCCGAAATGTTCTGAAGCATATTAGTGCTAAAAAAGAAAGGAAGAGAGTGCAAGTTCTATGGATTAACCTTCGTGAAGAACCGGTCGTGTACATTAACGGGCGACCCTTTGTTTTGCGTGATGTGGAAAGGCCATTTTCAAACCTTGAGTATACGGGAATAAATAGGGAAAGGGTTGAACAAATGGAAGCTCGTTTGAAAGAAGATATCCTATTGGAAGCACGAAGATATGGAAATAAAATCCTAGTGACTGATGAACTGCCAGATGGTCAGATGGTGGACCAGTGGGAACCAGTATCATGTAATTCAGTGAAAACACCACTAGAGGTGTATGAGGAATTGCAAGCAGAGGGATACCATGTTGATTATGAACGTGTTCCTATAACTGACGAAAAATCACCAAAAGAACTGGATTTTGACTTTTTGGTTCATAAAATTTCTCAAGCTGATGTAAATACAGAAATTGTTTTTAATTGTCAAATGGGGCGTGGACGAACTACAACAGGAATGGTCATTGCAACTTTAATTTACCTTAACAGAATTGGAGCTTCAGGTATTCCAAGAAGCAATTCTGTTGGTAAGATTTCTCAGTGTGCCACTAATGTGGCCGATCATTTACCTGACTCGGAGGAGGCAGTTCGCAGAGGAGAATATGCAGTTATAAGAAGTCTGATTCGTGTATTAGAGGGCGGTGTTGAGGGGAAGAGACAAGTGGACAAAGTTATCGATAAGTGTACCTCAATGCAGAATTTGCGCGAAGCAATTGCCACCTATCGCAACAGCATTCTGTGTCAACCAGATGAAAAGAAAAGGGAGTCATCACTTTCTTTTTTTGTGGAGTACTTGGAGAGATACTACTTCTTAATATGTTTTGCTGTATACATTCATTCAGCAAGGGCTGCACTTAATTCTAATTTTATCAGTCATAGCAGTTTTGCTGACTGGATGAGAGCTAGGCCAGAACTGTACAGTATTATTCGAAGGTTGCTCAGGAGAAATCCAATGGGTGCGCTTGGATATTCCAGTTTGAAGCCATCTCTAAAGAAGATAGCCGAATCTACTGATGGCCGCCCTTCTGAGATGGGTGTGGTTGCTGCTTTGAGGAATGGTGAAGTTCTTGGTCGTCAAACTGTTCTAAAAAGTGATCACTGTCCTGGTTGTCAAAACCCAAGTTTACCAGAGAGAGTGGAGGGGGCACCAAATTTCAGAGAAGTTCCTGGGTTTCCGGTTTTTGGTGTGGCAAACCCAACCATTGATGGTATTCGATCTGTCATTTGTCGGATTGGTAGCTCTAAAGGGGGACGCCCTGTACTTTGGCATAACATGAGAGAAGAACCTGTTATTTACATTAATGGAAAACCATTTGTTCTCCGGGAACTTGAAAGACCATACAAAAACATGTTGGAATACACGGGAATTGATCGTGAAAGAGTGGAGAAAATGGAAGCTCGGTTGAAAGAAGATATCCTACGGGAAGCTGAACACTATGGCAGTGCTGTATTGGTTATTCACGAAACAAATGATAGGCAAATATTTGATGCTTGGGAGCATGTCACATCTCATTCAATTCAAACCCCACTTGAAGTTTTTAAAAGCCTGCAGTCTGATGGTTTTCCTATTAAGTACGCACGTGTGCCCATCACTGATGGTAAAGCTCCTAAAAGTTCTGACTTTGACACAATGTCTGTTAATATAGCATCTTCTCCGAAGGACACTGCTTTTGTTTTCAACTGTCAGATGGGTAGAGGTAGGACAACCACTGGTACTGTCATAGCTTGTCTTGTTAAACTTAGAATTAATTATGGGAGGCCAATAAAAATCCTGGTTGACAACTTGGGCTTAGCCCATGAAGAAGTGAATGGTGGTTTCTCAAGTGCAGATGAAACAGGGGTTGGCATGAATGCATTAACCTCCGATGCTTCTCTAATTAAAATGGATGAGAAACAAAGTCACGTGTTTGGTATTAATGACATTCTCTTGTTATGGAAGATAACAACATTATTTGATAATGGAGTGGAATGCCGGGAAGCCTTAGATGCTATTATTGATAGATGTTCTGCACTTCAAAACATACGTCAAGCTGTTCTGCAATATAGAAAAGTATTCAATCAACAGCATGTTGAGCCTAGAGTAAGGAGAGTAGCCTTGAATCGTGGTGCTGAGTACCTGGAACGGTACTTCCGCCTCATTGCTTTTGCAGCATATCTTGGAAGCGAAGCTTTTGATGGCTTTTGTGGACAAGGCGAATCCAAAATGACATTTAAGACCTGGTTGCATAGGAGGCCAGAGGTGCAGGCTATGAAATGGAGCATCAGATTCAGACCAGGACGATTTTTCTCTGTCCCAGAAGGGTGGAGAGCACCAGAAGTGTCTCAGCATGGAGATGCAGTAATGGAGGCAATTGTCAAGGACCGGAATGGTTCTGTTCTGGGGAAAGGCTCCATACTTAAAATGTATTTCTTTCCTGGTCAGAAAACTTCCAGCCACATACAAGTACAGGGCGCACCAAATGTTTACAAGGTTGATGAATACCCTGTGTATAGCATGGCAACTCCAACAATATCTGGTGCCAAGGAGATGCTAGCATATTTAGGTGCTAAGCCTAAATCAGGACCTTCGGAAGCTTTAATTTCTCAAAAAGTTGTATTGACTGATCTGAGGGAGGAAGCAGTTGTTTATTTTGATGGTACCCCCTTTGTCTGGCGGGAGTTGAACAAACCTGTTGATACACTCAAGCATGTTGGAATCACTGGTCCTGTGGTGGAGCAAATGGAGGCACGCCTAAAAGAAGATATAATTGCAGAGATTAGAAAATCTGGTGGGCGAATGCTACTACATCGTGAGGAGTATAACCCTTCTACTAATCAGTCTGGTGTGGTTGGATACTGGGAAAACATTTCAGCGGATGACATCAAGACACCCGCGGAAGTTTATTCATCTTTGAAAAATGATGGATATGATATTGTCTACCGGAGGATTCCATTAACAAGAGAGAGAGACACCTTAGCGTCCGACATAGATGCAATTCAGTATGGTGAAGATGACTCTGCAGGTAGTTACCTATTCTTGACGCACACGGGTTTTGGTGGAGTTGCATATGCAATGGCGATCATGTGTATTAAACTAGGAGCAGTGACAGACTTAGAATCTAAAATCTCACGACCGTTGTATGGTCCTCACATACATCCAATGGTTCTTCAAGAGAACACGCCTTCCCGAGCTTCTAATGAAGAGGCATTTAGGATGGGTGACTACCGTGACATATTAAGCCTAACAAGAGTACTTATGCGTGGTCCCCAAAGCAAAGCAGATGTTGACATTACTATTGAAAGGTGTGCAGGGGCAGGGCATTTGCGGGATGATATTATGTATCATAGGAAAGAATTTGAGAAGTTCACTGATGGCGATGACGAGGAACGTGCTCATATTATGGACATGGGTGTCAAGGCTCTTAGGAGGTATTTTTTCCTTATCACATTTAGATCCTACCTTTACTGCACCTCTCCTGCCAAGATGGAGTTTGCAGCATGGATGGGTGCAAGACCTGAGCTTGGTCATCTATGTAGCAATCTCAGAATCGATAAATAA 3786 0.4276 MSIAKGPEQVMKLRGGSVLGKKAILKSDHFPGCQNKRLSPQIEGAPNYRQADSLHVHGVAIPTFDGIRNVLKHISAKKERKRVQVLWINLREEPVVYINGRPFVLRDVERPFSNLEYTGINRERVEQMEARLKEDILLEARRYGNKILVTDELPDGQMVDQWEPVSCNSVKTPLEVYEELQAEGYHVDYERVPITDEKSPKELDFDFLVHKISQADVNTEIVFNCQMGRGRTTTGMVIATLIYLNRIGASGIPRSNSVGKISQCATNVADHLPDSEEAVRRGEYAVIRSLIRVLEGGVEGKRQVDKVIDKCTSMQNLREAIATYRNSILCQPDEKKRESSLSFFVEYLERYYFLICFAVYIHSARAALNSNFISHSSFADWMRARPELYSIIRRLLRRNPMGALGYSSLKPSLKKIAESTDGRPSEMGVVAALRNGEVLGRQTVLKSDHCPGCQNPSLPERVEGAPNFREVPGFPVFGVANPTIDGIRSVICRIGSSKGGRPVLWHNMREEPVIYINGKPFVLRELERPYKNMLEYTGIDRERVEKMEARLKEDILREAEHYGSAVLVIHETNDRQIFDAWEHVTSHSIQTPLEVFKSLQSDGFPIKYARVPITDGKAPKSSDFDTMSVNIASSPKDTAFVFNCQMGRGRTTTGTVIACLVKLRINYGRPIKILVDNLGLAHEEVNGGFSSADETGVGMNALTSDASLIKMDEKQSHVFGINDILLLWKITTLFDNGVECREALDAIIDRCSALQNIRQAVLQYRKVFNQQHVEPRVRRVALNRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESKMTFKTWLHRRPEVQAMKWSIRFRPGRFFSVPEGWRAPEVSQHGDAVMEAIVKDRNGSVLGKGSILKMYFFPGQKTSSHIQVQGAPNVYKVDEYPVYSMATPTISGAKEMLAYLGAKPKSGPSEALISQKVVLTDLREEAVVYFDGTPFVWRELNKPVDTLKHVGITGPVVEQMEARLKEDIIAEIRKSGGRMLLHREEYNPSTNQSGVVGYWENISADDIKTPAEVYSSLKNDGYDIVYRRIPLTRERDTLASDIDAIQYGEDDSAGSYLFLTHTGFGGVAYAMAIMCIKLGAVTDLESKISRPLYGPHIHPMVLQENTPSRASNEEAFRMGDYRDILSLTRVLMRGPQSKADVDITIERCAGAGHLRDDIMYHRKEFEKFTDGDDEERAHIMDMGVKALRRYFFLITFRSYLYCTSPAKMEFAAWMGARPELGHLCSNLRIDK 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0273 1261 SMART PTPlike_phytase_2 88 243 - -
Lele05g0273 1261 SMART PTPlike_phytase_2 506 662 - -
Lele05g0273 1261 SMART PTPlike_phytase_2 950 1108 - -
Lele05g0273 1261 FunFam Paladin isoform B 883 1127 - -
Lele05g0273 1261 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 8 247 IPR029021 -
Lele05g0273 1261 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 866 1063 IPR029021 -
Lele05g0273 1261 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 430 664 IPR029021 -
Lele05g0273 1261 Gene3D Protein tyrosine phosphatase superfamily 24 272 IPR029021 -
Lele05g0273 1261 Gene3D Protein tyrosine phosphatase superfamily 884 1116 IPR029021 -
Lele05g0273 1261 Gene3D Protein tyrosine phosphatase superfamily 445 671 IPR029021 -
Lele05g0273 1261 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 430 1179 - -
Lele05g0273 1261 FunFam Paladin isoform A 444 677 - -
Lele05g0273 1261 CDD PTP_paladin 434 751 - -
Lele05g0273 1261 Pfam Inositol hexakisphosphate 88 242 - -
Lele05g0273 1261 Pfam Inositol hexakisphosphate 506 662 - -
Lele05g0273 1261 Pfam Inositol hexakisphosphate 951 1106 - -
Lele05g0273 1261 CDD PTP_paladin 14 311 - -
Lele05g0273 1261 FunFam Paladin isoform A 24 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0273 Lele-ChrLele05 1548908 1557716 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0273 05 1548908 1557716 Lele07g0291 07 1603241 1612092 hybridization
Lele05g0273 05 1548908 1557716 Lele08g0094 08 559713 570934 hybridization