Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0093 ATGGGAGTGCACTCACTGCATCACTCTTGTCCGCAGTTAGTTAATTTAGCTCGTGATCTTGATGGCGATGTGATAGAATTTAATGCAACGCTTGATATTTGTAAAGCGAAGGAGCCAGAACAAGTGATGAAGTTGAGGGGAGGATCGGTGCTGGGAAAGAAGACCATTCTGAAGAGCGACCATTTCCCTGGTTGCCAGAACAAACGCTTGTCTCCTCAGATTGAAGGCGCTCCGAATTATCGTCAGGCTGACTCATTACATGTTCACGGTGTTGCAATCCCGACATTTGATGGAATCCAAAATGTTCTGAAGCATATTAGTGCTCAAAAAGAAGGGAAGAGAGTGCGAGTTCTTTGGATTAACCTTCGTGAAGAACCGGTCGTGTACATTAATGGGCGACCCTTTGTTTTGCGTGATGTGGAAAGGCCATTTTCCAACCTTGAGTATACGGGAATAAATAGGGAAAGGGTTGAACAAATGGAAGCTCGTTTGAAAGAAGATATCCTAATGGAAGCAGGAAGATATGGAAATAAAATCCTTGTAACTGATGAACTGCCAGATGGCCAGATGGTGGACCAGTGGGAACCAGTATCATGTAATTCAGTGAAAACACCACTAGAGGTGTATGAGGAATTGCAAGCAGAGGGATACCATGTTGATTATGAACGTGTTCCTATAACTGACGAAAAATCACCAAAAGAACTGGATTTTGACTTTTTGGTTCATAAAATTTCTCAAGCTGATGTAAATACAGAAATTGTTTTTAATTGTCAAATGGGGCGTGGAAGAACTACAACAGGAATGGTCATTGCAACTTTAATTTACCTTAACAGAATTGGAGCTTCAGGTATTCCAAAAAGCAATTCTGTTGGTAAGATTTCTCAGTGTGCCACTAATGTGGCTGATCATTTACCTTACTCGGAGGAGGCAGTTTGCAGAGGAGAATATGCAGTCATAAGAAGTCTGATTCGTGTATTAGAGGGTGGCGTTGAGGGGAAGAGGCAGGTGGACAAAGTTATCGATAAGTGTGCCTCAATGCAGAATTTGCGTGAAGCAATTACCACCTATCGCAACAGTATTCTGCGTCAACCAGATGAAAAAAAAAGGGAGTCATCACTTTCTTTTTTTGTGGAGTACTTGGAGAGATACTACTACTTAATATGTTTTGCTGTATACATTCATTCAGAAAGGGCTGCACTTAATTCTAATTTTATCAGTCACAGCAGTTTTGCTGACTGGATGAGAGCTAGGCCAGAACTGTACAGTATTATTCGGAGGTTGCTCAGGAGAAATCCAATGGGTGCGCTGGGATATTCCAGTTTGAAGCCATCTCTAGAGAAGATGGCTGAATCTACCGATGGCCGTCCTTCTGAGATGGGTGTGGTTGCTGCTTTGAGGAATGGTGAAGTTCTTGGTCGTCAAACTGTTCTAAAAAGTGATCATTGTCCTGGTTGTCAAAACCCAAGTTTACCAGAAAGAGTGGAGGGGGCACCAAATTTCAGAGAAGTTCCTGGGTTTCCGGTTTTTGGTGTGGCAAACCCAACCATTGATGGTATTCGATCTGTCATTCGTAGGGTTGGTAGCTCTAAAGGGGGACGCCCTGTACTTTGGCATAACATGAGAGAAGAACCTGTTATTTACATTAATGGAAAACCATTTGTTCTCCGGGAACTTGAAAGACCATACAAAAACATGTTGGAGTACACGGGAATTGATCGTGAAAGAGTGGAGAAAATGGAAGCTCGGTTGAAAGAAGATATCCTACGGGAAGCTGAACACTATGGCAATGCTGTATTGGTTATTCATGAAACAGATGATGGGCAAATATTTGATGCTTGGGAGAATGTCACATCTCATTCAATTCAAACCCCACTTGAAGTTTTTAAAAGCCTGCAGGCTGATGGTTTTCCTATTAAGTACGCACGTGTGCCCATCACTGATGGTAAAGCTCCTAAAAGTTCTGACTTTGACACAGTGGCTGTTAATATAGCATCTTCTCCGAAGGACACTGCTTTTGTTTTCAACTGTCAGATGGGTAGAGGTAGGACAACCACTGGCACTGTCATAGCTTGTCTTGTTAAACTTAGAATTAATTATGGGAGGCCCATCAAAATCCTGGTTGACAACTTGGGCGTAGCCCATGAAGAAGTGAATGGTGGTTTCTCAAGTGGAGATGAAACAGGGGTTGACATTAATGCATTAACCTCCGATGCTTCTCTAATTAAAATGGATGAGAAACAAAGTCACGTGTTTGGTATTAATGACATTCTCTTGTTATGGAAGATAACAACATTATTTGATAATGGGGTGGAATGCCGGGAGGCCTTAGATGCTATTATTGATAGATGTTCTGCACTTCAAAACATACGTCAAGCTGTTCTGCTATATAGAAGAGTATTCAATCAACAGCATGTTGAGCCTAGAGTAAGGAGGGTGGCCTTGAATCGTGGTGCTGAGTACCTGGAACGGTACTTCCGCCTCATTGCTTTTGCTGCATATCTTGGAAGTGAAGCTTTTGATGGTTTTTGTGGCCAAGGAGAATCCAAAATGACATTTAAGACCTGGTTGCATAGGAGGCCAGAGGTGCAGGCTATGAAATGGAGCATCAGACTCAGACCAGGACGATTTTTCTCTGTCCCGGAAGGGTTGAGAGCACCACAAGAGCCTCAGCATGGAGATGCCGTAATGGAGGCAATTGTCAAGGACCGGAATGGTTCTGTTTTGGGGAAAGGCTCCATACTTAAAATGTATTTTTTTCCTGGTCAGAGAACTTCCAGCCTCATACAAATACAGGGCGCACCAAATGTTTACAAGGTTGATGGATACCCTATGTATAGCATGGCAACTCCAACCATCTCTGGTGCCAAGGACATGCTAGCATATTTAGGTGCTAAGCCTAAATCAAGAGCTTCGGAAGCTTCAATTTCTCAAAAAGTTGTATTGACTGATCTGAGGGAGGAAGCAGTTGTTTATTTTGATGCTACCCCCTTTGTCTGGCGGGAGTTGAACAAACCTGTTGATACACTCAAGCATGTGGGAATCACTGGTGCTGTGGTGGAGCACATGGAGGCACGGCTAAAAGAAGATATAATTGCAGAGATTAGAAAGTCTGGTGGGCGAATGCTACTACATCGGGAGGAGTATAACCCTTCAACTAATCAGTCTGGTGTGGTTGGATACTGGGAAAACATTTCAGCAGATGATGTCAAGACACCTGCAGAAGTTTATTCATCTTTGAAAAATGATGGATATGATATTGTCTACCGGAGGATTCCATTAACAAGAGAGAGAGACGCCTTAGCCTCTGACATAGATGCAATTCAGTATTGTGAAGATGACTCTGCAGGTAGTTACCTATTCTTGTCGCACACAGGTTTTGGGGGAGTTGCATATGCAATGGCGATCATGTGCATTAAACTAGGAGCAGTGGCAAACTTAGAATCTAAAATCTCAGGACCGTTGTATGGTCCTCCCATACATCCAATGGTTCTTCAAGAGAACATGCCTTCCAGAGCTTCAAATGAAGAGGCATTCAGGATGGGTGACTACCGTGACATATTAAGCCTAACAAGAGTACTTATGCGTGGTCCCCAAAGCAAAGCAGATGTTGACATTATTATTGAAAGGTGTGCAGGGGCAGGGCATTTGCGGGATGATATTATGTATTATAGGAAAGAATTTGAGAAGTTCACTGACGGGGATGACGAGGAACGTGCTCATCTTATGGACATGGGTGTCAAGGCTCTGAGGCGGTATTTTTTCCTTATCACATTCAGATCATACCTTTACTGCACCTCTCCTGCCAAGATGGAATTTGCTGCATGGATGGATGCAAGATCTGAACTTGGTCATCTATGTAGCAATCTCAGAATCGATAAATAA 3882 0.4292 MGVHSLHHSCPQLVNLARDLDGDVIEFNATLDICKAKEPEQVMKLRGGSVLGKKTILKSDHFPGCQNKRLSPQIEGAPNYRQADSLHVHGVAIPTFDGIQNVLKHISAQKEGKRVRVLWINLREEPVVYINGRPFVLRDVERPFSNLEYTGINRERVEQMEARLKEDILMEAGRYGNKILVTDELPDGQMVDQWEPVSCNSVKTPLEVYEELQAEGYHVDYERVPITDEKSPKELDFDFLVHKISQADVNTEIVFNCQMGRGRTTTGMVIATLIYLNRIGASGIPKSNSVGKISQCATNVADHLPYSEEAVCRGEYAVIRSLIRVLEGGVEGKRQVDKVIDKCASMQNLREAITTYRNSILRQPDEKKRESSLSFFVEYLERYYYLICFAVYIHSERAALNSNFISHSSFADWMRARPELYSIIRRLLRRNPMGALGYSSLKPSLEKMAESTDGRPSEMGVVAALRNGEVLGRQTVLKSDHCPGCQNPSLPERVEGAPNFREVPGFPVFGVANPTIDGIRSVIRRVGSSKGGRPVLWHNMREEPVIYINGKPFVLRELERPYKNMLEYTGIDRERVEKMEARLKEDILREAEHYGNAVLVIHETDDGQIFDAWENVTSHSIQTPLEVFKSLQADGFPIKYARVPITDGKAPKSSDFDTVAVNIASSPKDTAFVFNCQMGRGRTTTGTVIACLVKLRINYGRPIKILVDNLGVAHEEVNGGFSSGDETGVDINALTSDASLIKMDEKQSHVFGINDILLLWKITTLFDNGVECREALDAIIDRCSALQNIRQAVLLYRRVFNQQHVEPRVRRVALNRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESKMTFKTWLHRRPEVQAMKWSIRLRPGRFFSVPEGLRAPQEPQHGDAVMEAIVKDRNGSVLGKGSILKMYFFPGQRTSSLIQIQGAPNVYKVDGYPMYSMATPTISGAKDMLAYLGAKPKSRASEASISQKVVLTDLREEAVVYFDATPFVWRELNKPVDTLKHVGITGAVVEHMEARLKEDIIAEIRKSGGRMLLHREEYNPSTNQSGVVGYWENISADDVKTPAEVYSSLKNDGYDIVYRRIPLTRERDALASDIDAIQYCEDDSAGSYLFLSHTGFGGVAYAMAIMCIKLGAVANLESKISGPLYGPPIHPMVLQENMPSRASNEEAFRMGDYRDILSLTRVLMRGPQSKADVDIIIERCAGAGHLRDDIMYYRKEFEKFTDGDDEERAHLMDMGVKALRRYFFLITFRSYLYCTSPAKMEFAAWMDARSELGHLCSNLRIDK 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0093 1293 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 35 279 IPR029021 -
Lele06g0093 1293 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 457 1211 - -
Lele06g0093 1293 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 898 1127 IPR029021 -
Lele06g0093 1293 Gene3D Protein tyrosine phosphatase superfamily 477 703 IPR029021 -
Lele06g0093 1293 Gene3D Protein tyrosine phosphatase superfamily 55 298 IPR029021 -
Lele06g0093 1293 Gene3D Protein tyrosine phosphatase superfamily 915 1148 IPR029021 -
Lele06g0093 1293 FunFam Paladin isoform B 915 1155 - -
Lele06g0093 1293 SMART PTPlike_phytase_2 538 694 - -
Lele06g0093 1293 SMART PTPlike_phytase_2 120 275 - -
Lele06g0093 1293 SMART PTPlike_phytase_2 982 1140 - -
Lele06g0093 1293 FunFam Paladin isoform A 56 299 - -
Lele06g0093 1293 Pfam Inositol hexakisphosphate 538 694 - -
Lele06g0093 1293 Pfam Inositol hexakisphosphate 983 1138 - -
Lele06g0093 1293 Pfam Inositol hexakisphosphate 120 274 - -
Lele06g0093 1293 CDD PTP_paladin 466 783 - -
Lele06g0093 1293 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 462 696 IPR029021 -
Lele06g0093 1293 FunFam Paladin isoform A 476 710 - -
Lele06g0093 1293 CDD PTP_paladin 46 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0093 Lele-ChrLele06 572585 583640 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0093 06 572585 583640 Lele07g0291 07 1603241 1612092 hybridization
Lele06g0093 06 572585 583640 Lele08g0094 08 559713 570934 hybridization