Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0042 ATGGCTATAATCACGGGCTCCCTGTCCTCGGCAACTCTGCTACAGTCGAGGCATACGACGTCGTTCCAATTCCCCACCTTCTCTTCCGCCATCTCCTGGGGTTTGCTTCATCACTCATCGTCTCACTCCCTCCATTCCTCCCGCTTCTGCAGCTGCTCCGTTTCTCCCAGAGCCCAATCGACCAAAGCTCTTGCAGTTCCTAGGAGGAAGGCAATGTTTTTGACCTTATCAAGTTATGTTATCTCAGAAGTTGCTTTGCATGGCAAGGCTTTGGCTCAAGCTCAGCAATCTGTTGTGTTCAGAGAATATGTAGACACATTTGATGGTTATTCATTCAAGTATCCTGGCAACTGGATCCAAGTCCGAGGTGCCGGGGCTGACATATTCTTCAGGGACCCTTATGTTCTGGATGAAAACATATCAGTTGAAGTTTCCTCGCCTTCGTCTTCCAGATATAAGAGTGTTGAAGATTTGGGTCCTCCCGAGGAAGCAGGAAAGAAAGTACTCAAGCAGTATTTAACTGAGTTTATGTCTACAAGACTTGGTGTAAGACGCGAATCAAATATTCTAAGCACATCTTCAAGAGTTGCCGATGATGGCAAGCTATACTATGAAGTCGAGGTAAACATAAAGTCATACGCTAATAACAATGAGCTGGCTGTGATGCCACAAGACCGAGTGGTACGTCTGGAATGGGACCGGAGGTACCTATCTGTTCTTGGAGTTGAAAACAACCAGTTATACGAGTTGCGATTGCAGGCACCTGAAAATGTGTTTTTACAAGAGGAAAGTGATCTTCGTCAAGTAATGGATTCATTTCGAGTGAACAAGGTAGCTGCTTAG 843 0.4579 MAIITGSLSSATLLQSRHTTSFQFPTFSSAISWGLLHHSSSHSLHSSRFCSCSVSPRAQSTKALAVPRRKAMFLTLSSYVISEVALHGKALAQAQQSVVFREYVDTFDGYSFKYPGNWIQVRGAGADIFFRDPYVLDENISVEVSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRVADDGKLYYEVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNQLYELRLQAPENVFLQEESDLRQVMDSFRVNKVAA 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0042 280 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 94 275 - -
Lele08g0042 280 SUPERFAMILY Mog1p/PsbP-like 101 275 IPR016123 -
Lele08g0042 280 Pfam PsbP 100 275 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lele08g0042 280 PANTHER - 33 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0042 Lele-ChrLele08 284878 286519 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0042 08 284878 286519 Lele08g0042 08 284878 286519 ECH
Lele05g0230 05 1284893 1289397 Lele08g0042 08 284878 286519 hybridization
Lele06g0043 06 307774 309073 Lele08g0042 08 284878 286519 hybridization