Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0043 ATGAAGTCTAATTTTGTAAAGCATTCTTCTGTTATTTGTATGCGTTTTTACTCTTTCCCTGCATCTGTGTCAGAGACCAAAGCTCTTGCAGTTCCAAGGAGGAAAGCAATGTTTTTGACCTTGTCAAGTTATGTTATCTCAGAAGTTGCTTTGCATGGCAAGGCTGTGGCTCAAGCTCAGCAATCTGTTGTGTTCAGAGAATATGTAGACACATTTGATGGTTATTCATTCAAGTATCCTGGCAACTGGATCCAAGTCCGAGGTGCCGGGGCTGACATATTCTTCAGGGACCCTTATGTTCTGGATGAAAACATATCAGTTGAAGTTTCCTCGCCTTCATCTTCCAGATATAAGAGTGTTGAAGATTTGGGTCCTCCCGAGGAAGCAGGAAATACAGTACTTAAGCAGTATTTAACTGAGTTTATGTCTACAAGACTTGGTGTAAGACGCGAATCAAATATTCTAAGCACATCTTCAAGTGTTGCCGATGATGGCAAGCTATATTATGAAGTCGAGGCACCTGAAAATGTGTTTTTACAAGAGGAAAGTGATCTTCGTCAAGTAATGGATTCATTTCGAGTGAACAAGGTAGCTGCTTAG 600 0.4083 MKSNFVKHSSVICMRFYSFPASVSETKALAVPRRKAMFLTLSSYVISEVALHGKAVAQAQQSVVFREYVDTFDGYSFKYPGNWIQVRGAGADIFFRDPYVLDENISVEVSSPSSSRYKSVEDLGPPEEAGNTVLKQYLTEFMSTRLGVRRESNILSTSSSVADDGKLYYEVEAPENVFLQEESDLRQVMDSFRVNKVAA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0043 199 Pfam PsbP 65 172 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lele06g0043 199 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 59 173 - -
Lele06g0043 199 PANTHER - 27 172 - -
Lele06g0043 199 SUPERFAMILY Mog1p/PsbP-like 66 193 IPR016123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0043 Lele-ChrLele06 307774 309073 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0043 06 307774 309073 Lele06g0043 06 307774 309073 ECH
Lele06g0043 06 307774 309073 Lele07g0238 07 1314083 1315744 hybridization
Lele06g0043 06 307774 309073 Lele08g0042 08 284878 286519 hybridization