Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0230 ATGCCATCTTCGTCCCGAAGAAGGAAAAATCAGTACAATTCAGTTTGGGTGTTAACGTCAAGAGAAAGAGACATTGCGAGAACAAAGTACTGGCAATTTCACAGAAACGAGCTGCCTAGAAAGCAAGAGCTGAAGGGACAAAATCCCGAAGAAAGGCCTAATCGTAATTCAAGGGCTGAGTGTCGCCTGGATCTTTTGCAGCCACCGTCCCCACAGGATGCCACATGCTTCCCTTCTCCTCCCATGGCTATAATCTCTGGCTCCCTATCCCCAACACTGCTACCCTCGAGGCATACGACGTCGTTCCAACTCCCCCTCTTCTCTTCCACCATTTCCTGGGGTTTGCTTTATCACTCATCGTCTCACTCCCTCCATTCCTCTCGCTCCTGCAGCTGCTCCGCTTCTCCCAGACCCCAATCGATCAAAGCTCTTGCAGTTCCCAGGAGGAAAGCAATGTTTTTGACCCTATCAAGTTATGTTATCTCAGAAGTTGCTTTGCATGGCATGGCAGTGGCTCAAGCTCAGCAATCTGTCGTGTTCAGAGAATATGTAGACACATTTGACGGTTATTCATTCAAGTATCCTGGGAACTGGATCCAAGTCCGAGGTGCTGGGGCTGACATATTCTTCAGGGACCCTTATGTTCTGGACGAAAACATATCAGTTGAAGTGTCCTCGCCTTCATCTTCCAGATATAAGAGTGTTGAAGATTTGGGTCCTCCCGAGGAAGCCGGAAAGAAAGTACTGAAGCAGTATTTGACTGAGTTTATGTCTACAAGACTTGGTGTAAGACGCGAATCAAATATTCTAAGCACATCTTCAAGAGTTGCTGATGATGGCAAGCTATACTATGAAGTCGAGGTAAACATAAAGTCGTACGCTAATAACAATGAACTGGCTGTGATGCCACAAGACCGAGTGGTACGTCTGGAATGGGACCGGAGGTACCTATCTGTTCTTGGAGTTGAAAACAACCAGTTATACGAGTTGCGATTGCAGGCACCTGAAAATGTGTTTTTACAAGAGGGAAGTGATCTTCGTCAAGTAATGGAATCATTTCGAGTGAACAAGGTAGCAGCTTAG 1083 0.4654 MPSSSRRRKNQYNSVWVLTSRERDIARTKYWQFHRNELPRKQELKGQNPEERPNRNSRAECRLDLLQPPSPQDATCFPSPPMAIISGSLSPTLLPSRHTTSFQLPLFSSTISWGLLYHSSSHSLHSSRSCSCSASPRPQSIKALAVPRRKAMFLTLSSYVISEVALHGMAVAQAQQSVVFREYVDTFDGYSFKYPGNWIQVRGAGADIFFRDPYVLDENISVEVSSPSSSRYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRVADDGKLYYEVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSVLGVENNQLYELRLQAPENVFLQEGSDLRQVMESFRVNKVAA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0230 360 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 174 355 - -
Lele05g0230 360 SUPERFAMILY Mog1p/PsbP-like 181 355 IPR016123 -
Lele05g0230 360 Pfam PsbP 180 355 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lele05g0230 360 PANTHER - 101 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0230 Lele-ChrLele05 1284893 1289397 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0230 05 1284893 1289397 Lele05g0230 05 1284893 1289397 ECH
Lele05g0230 05 1284893 1289397 Lele07g0238 07 1314083 1315744 hybridization
Lele05g0230 05 1284893 1289397 Lele08g0042 08 284878 286519 hybridization