Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0037 ATGGCCTCCAAAACGGTCAATTCCTCTCTATCCCGTCCCGCAACTACCTTCTTATTCCCTTTCAATCAGAAAGGACTGAGACCTATGTCACTCCCTCTCCTCCGATCCTTCCACTGCAGATCGAAACGCCTCGTTTTGTCGAGAAGATTGGTGCCGAACGCTTGCGCTAAGGTGGAAGAGAATAATGTCGCGAAAAATTCACCTGCAAGTGAATGGGGGAAGGTTTCTGCTGTCTTATTTGACATGGATGGGGTCCTCTGCAACAGTGAAGACCTTTCTAGAAGAGCGGCCGTTGATGTATTCGCGGAGATGGGTGTCCAAGTCACCGTCGAGGATTTTGTGCCATTCATGGGAACCGGTGAAGCAAACTTTTTGGGAGGTGTTGCCTCTGTCAAGGGAGTTAAAGGATTTAACCCTGAAGCAGCAAAACAGAGATTCTTTGAAATTTATTTAGATAAGTATGCAAAACCAGAGTCTGGAATTGGATTCCCAGGTGCCCTTGAACTAATTTCTCAGTGCAAAGGAAAAGGCCTTAAAGTTGCTGTTGCATCAAGTGCTGACCGTATAAAGGTTGATGCAAATCTTGCTGCTGCTGCTTTACCATTGTCATTGTTTGATGCTATTGTGTCTGCAGACGCTTTTGAGAATTTGAAACCTGCTCCTGATATTTTTTTGGCTGCATCAAGGATATTGAATGTGCCCCCTAGTGAGTGTCTTGTTATTGAAGATGCATTGGCCGGAGTGCAGGCTGCCAAAGCTGCAAAGATGAGATGCATCGCAGTCAGGACCACACTATCAGACGAGGCATTAGAATCTGCTGGCCCAACACTTATCCGTGATGATATAGGAAGTGTTTCACTTGATGATATTCTTAGTGGTGGCTCTATTAGCCATAATAAGAGGATGCAGGGGCCTCAATCTTTTAATAATTCCGTGCAAACTTCATCTGCAATGCTTGCTGGAAATTCAGATGACAGACTTAGCAAGACTACAAGTGGTGCCAATGGGGATATTTTCCCTACTAAATGGTTGCAGGGTTCTCGAAGAGATGTACTAAGATTTGGAAGCCTGGGTATTGCTATCTCATGCCTCATCTTCACTTTAAATAACTGGAAGGCAATGCAGTATACTTCACCTAAATCTATTTGGAATCTGTTGTTTGGTGTAAGCCAACCATCTTTGGAGCAAAATGAAGACAGATCAAGATCTGATAGGATCCAGCAATTTATGGACTACATAGCTGATCTGGAAGGCAAGGGAAATGCTCAGATTGTTCCAGAATTTCCACCTAAACTTGATTGGCTGAATACACCCCCCCTTCAGTTTGGCAGGGATCTGAAAGGAAAAGTGGTTCTGCTGGATTTCTGGACTTATTGTTGTATCAATTGTATGCATGTGCTGCCAGATCTGGATTTTTTGGAAAAGAAATACAAAAATATGCCGCTCATTGTTGTGGGTGTCCATTCTGCAAAGTTTGATAATGAGAAAGATTCTGAAGCCATTCGCAATGCAGTGCTCCGCTATGACATCACTCACCCAGTTGTCAATGACGGAGATATGTATCTTTGGCGGAAGCTGGGCATAAGTTCATGGCCGACATTTGCGATCATTGGGCCTAATGGTAATCTCCTTGCACAAATTTCGGGAGAGGGGCACAAGAAGGATCTTGATGATTTTGTGGAGGCAGCTCTTCTGTTTTATGGAAAACAGAACATGTTGGACAATACACCACTGACACTGAATTTGGAGAAAGATAACGATCCTAGCCTAGCTACATCTCCTTTGAAGTTTCCAGGAAAGCTAGCAATTGATGTCCTTAACGACAGACTTTTCATTTCAGACAGTAACCACAACCGCATAGTGGTAACCGACCTAGATGGGAATTTTATTGTACAAATTGGGAGCAGTGGAGAGGAAGGTTTACAGGATGGTTCATTTGATGATGCCGCCTTTAACCGCCCTCAGGGTCTTGCTTATAATGCAAAGCAAAATATCCTTTACGTTGCAGACACTGAAAACCATGCTTTGAGAGAGATTGATTTTGTTAATGAGAAAGTACGAACTCTTGCTGGCAATGGGACCCAAGGTTCTGACTATTCTGGTGGAGGGAAAGGAGCCGCTCAGCTCCTCAATTCCCCTTGGGATGTATGCTTTCATCCTATGGAAGAAAAAATTTATATTGCCATGGCTGGCCAGCATCAGATATGGGAGCACAATTTATTAGATGGAATTACAAGAGCGTTTAGTGGTGATGGTTATGAGAGGAATTTAAATGGATCAAGCTTCACAAGCACCTCATTTGCTCAACCTTCTGGCATATCTTTGTCTCAAGATCAAATGGAAGTATATATTGCTGACAGTGAGAGTAGTTCGATTCGAGCTGTTGATCTGAAGACTGGAGGATCAAGGTTACTTGCTGGCGGTGACCCAATCTTCACAGATAATTTGTTTAAGTTTGGTGATCACGATGGAATAGCCTCTGAAGTACTTCTTCAACATCCACTGGCAGTTTTGTGCGCAAAAGATGGCCAAATTTACATCACAGACAGCTACAATCATAAGATAAAAAAGTTAGATCCAGCTAGTAAAAGAGTTAGCACAATTGCAGGAACAGGGAAAGCTGGATTTAGGGATGGAACAGCTGTAGTAGCTCAGCTCTCGGAACCATCTGGAATTGTTGAAGGGAATAATGGGAGACTGTTCATAGCTGATACAAACAACAGCTTAATCCGATATCTGGATTTGAACAACGGAAGTTTGGAACTCCATACTTTGGAGCTTAAAGGCTTTCAGCCTCCTTCACCTAAATCCAGGGTTTTAAAACGTCTAAGGAGACGATCATCAGCAGATACAGTGACCATCACTGCCAATGGTGTTTCATCAAATGAAGGACGCTTATCTATTCATGTATCGTTACAAAATGAGTACCATTTCTCGAAGGAAGCACGTAGTAGATTTAGTGTTGATATTGAACCTGAAAATGCCGTCAGTGTTGAACCCCAGGATGGATTCCTTGATGAGGGATCTGCAACTCTTTATTTTCAGAGATCATCTACTTCAGCTTCAATGGGAAGAATTAATTGTAAGATTTACTATTGCAAGGAAGACGAGGTTTGTTTGTATCAATCCTTACAGTTTGAGGTGCCTTTCCGAGAGGCAGAACCTAACTCTACCCGAGCAGATGTCACACTTTCGCATTTGGTGAAACCCAAAGCTTCAGCTAGTAGCTTTTTACAGCCCGTTGCCCCGTGA 3252 0.4305 MASKTVNSSLSRPATTFLFPFNQKGLRPMSLPLLRSFHCRSKRLVLSRRLVPNACAKVEENNVAKNSPASEWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFAEMGVQVTVEDFVPFMGTGEANFLGGVASVKGVKGFNPEAAKQRFFEIYLDKYAKPESGIGFPGALELISQCKGKGLKVAVASSADRIKVDANLAAAALPLSLFDAIVSADAFENLKPAPDIFLAASRILNVPPSECLVIEDALAGVQAAKAAKMRCIAVRTTLSDEALESAGPTLIRDDIGSVSLDDILSGGSISHNKRMQGPQSFNNSVQTSSAMLAGNSDDRLSKTTSGANGDIFPTKWLQGSRRDVLRFGSLGIAISCLIFTLNNWKAMQYTSPKSIWNLLFGVSQPSLEQNEDRSRSDRIQQFMDYIADLEGKGNAQIVPEFPPKLDWLNTPPLQFGRDLKGKVVLLDFWTYCCINCMHVLPDLDFLEKKYKNMPLIVVGVHSAKFDNEKDSEAIRNAVLRYDITHPVVNDGDMYLWRKLGISSWPTFAIIGPNGNLLAQISGEGHKKDLDDFVEAALLFYGKQNMLDNTPLTLNLEKDNDPSLATSPLKFPGKLAIDVLNDRLFISDSNHNRIVVTDLDGNFIVQIGSSGEEGLQDGSFDDAAFNRPQGLAYNAKQNILYVADTENHALREIDFVNEKVRTLAGNGTQGSDYSGGGKGAAQLLNSPWDVCFHPMEEKIYIAMAGQHQIWEHNLLDGITRAFSGDGYERNLNGSSFTSTSFAQPSGISLSQDQMEVYIADSESSSIRAVDLKTGGSRLLAGGDPIFTDNLFKFGDHDGIASEVLLQHPLAVLCAKDGQIYITDSYNHKIKKLDPASKRVSTIAGTGKAGFRDGTAVVAQLSEPSGIVEGNNGRLFIADTNNSLIRYLDLNNGSLELHTLELKGFQPPSPKSRVLKRLRRRSSADTVTITANGVSSNEGRLSIHVSLQNEYHFSKEARSRFSVDIEPENAVSVEPQDGFLDEGSATLYFQRSSTSASMGRINCKIYYCKEDEVCLYQSLQFEVPFREAEPNSTRADVTLSHLVKPKASASSFLQPVAP 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0037 1083 Gene3D Glutaredoxin 395 565 - -
Lele08g0037 1083 FunFam NHL repeat-containing protein 2 580 736 - -
Lele08g0037 1083 SFLD Haloacid Dehalogenase 74 283 - -
Lele08g0037 1083 CDD NHL-2_like 633 974 IPR045302 -
Lele08g0037 1083 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 74 283 - -
Lele08g0037 1083 SUPERFAMILY Thioredoxin-like 423 561 IPR036249 -
Lele08g0037 1083 Gene3D Putative phosphatase; domain 2 88 159 IPR023198 -
Lele08g0037 1083 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 199 261 IPR006439 -
Lele08g0037 1083 ProSiteProfiles Thioredoxin domain profile. 385 565 IPR013766 -
Lele08g0037 1083 Pfam NHL repeat 651 676 IPR001258 GO:0005515
Lele08g0037 1083 FunFam NHL repeat-containing protein 2 403 567 - -
Lele08g0037 1083 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 223 243 IPR006439 -
Lele08g0037 1083 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 75 86 IPR006439 -
Lele08g0037 1083 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 205 221 IPR006439 -
Lele08g0037 1083 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 173 186 IPR006439 -
Lele08g0037 1083 PANTHER NHL REPEAT-CONTAINING PROTEIN 2 100 1078 - -
Lele08g0037 1083 SUPERFAMILY NHL repeat 592 919 - -
Lele08g0037 1083 SUPERFAMILY HAD-like 75 284 IPR036412 -
Lele08g0037 1083 Pfam Haloacid dehalogenase-like hydrolase 78 261 IPR041492 -
Lele08g0037 1083 CDD HAD_BPGM-like 77 263 - -
Lele08g0037 1083 FunFam Chloroplast protein HCF243 811 915 - -
Lele08g0037 1083 SMART LY_2 588 630 IPR000033 -
Lele08g0037 1083 SMART LY_2 822 865 IPR000033 -
Lele08g0037 1083 SMART LY_2 760 802 IPR000033 -
Lele08g0037 1083 Pfam Thioredoxin-like 448 542 IPR012336 -
Lele08g0037 1083 ProSiteProfiles NHL repeat profile. 831 861 IPR001258 GO:0005515
Lele08g0037 1083 Gene3D - 566 737 IPR011042 -
Lele08g0037 1083 Gene3D - 818 914 IPR011042 -
Lele08g0037 1083 Gene3D - 77 275 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0037 Lele-ChrLele08 226597 256749 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0037 08 226597 256749 Lele08g0037 08 226597 256749 ECH
Lele05g0225 05 1256159 1261498 Lele08g0037 08 226597 256749 hybridization
Lele06g0036 06 241251 276636 Lele08g0037 08 226597 256749 hybridization