Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0036 ATGGTTAATTCCTCTCTATCCCGGCCTGCAACTACCTTCTTATTCCCTTTCAATCAGAAAGGACTGAGACCTATATCACTCCCTCTCCTCCGATCCTTCCACTGCAGACCGAAACGCCTCGTTTTGTCGCGAAGATTGGTGCTGAAAGCTTGCGCTAAGGTGGAAGAGAATAATGTCGCAAAAAATTCATCTGCAAGTGAATGGGGGAAGGTTTCTGCTGTCTTGTTTGACATGGATGGGGTCCTTTGCAACAGCGAAGACCTTTCTAGAAGAGCGGCCGTTGATGTATTCGCGGAGATGGGCGTCCAAGTCACTGTTGAGGATTTTGTGCCATTCATGGGAACCGGGGAAGCAAACTTTTTGGGAGGTGTTGCCTCTGTCAAGGGAGTTAAAGGATTTAACCCTGAAGCAGCAAAACAGAGATTCTTTGAAATTTATTTAGATAAGTATGCAAAACCAGAGTCTGGAATTGGATTCCCAGGTGCCCTTGAACTAATTTCTCAGTGCAAAGGAAAAGGCCTTAAAGTTGCTGTTGCATCCAGTGCTGATCGTATAAAGGTTGATGCAAATCTAGCTGCTGCTGCTTTACCGTTGTCATTGTTTGATGCTATTGTGTCTGCAGACGCTTTTGAGAATTTGAAACCTGCTCCTGATATTTTTTTGGCTGCATCAAGGATATTGAATGTGCCCCCTAGTGAGTGTCTTGTTATTGAAGATGCATTGGCTGGAGTGCAGGCTGCCAAAGCTGCAAAGATGAGATGCATAGCAGTCAGGACCACACTATCAGACGAGGCATTAGAATCTGCTGGCCCAACACTTATCCGTGATGATATAGGAAGTGTTTCACTTGATGATATTCTTAGTGGTGGCTCTATTAGCCATAATAAGAGGATGCAGGGGCCTCAATCTTTTAATAATTCCGTGCAAACTTCATCTGCAATGCCTGCTGGAAATTCAGATGACAGACTTAGCAAGACAAGTATTGCCAATGGGGATATTTTCCCTACTAAATGGTTGCAGGGTTCTCGAAGAGATGTACTGAGATTTGGAAGCCTGGGTATTGCTATCTCATGCCTCATCTTCACTTTAAATAACTGGAAGGCAATGCAGTATACTTCACCTAAATCTATTTGGAATCTGTTGTTTGGTGTAAGCCAACCATCTTTGGAGCAAAATGAAGGCAGATCAAGATCTGATAGGATCCAGCAATTTATGGACTACATAACTGATCTGGAAGGCAAGGGAAATGCTCAGATTGTTCCAGAATTTCCACCTAAACTTGATTGGCTGAATACATCCCCCCTTCAGTTTGGCAGGGATCTGAAAGGAAAAGTGGTTCTGCTGGATTTCTGGACTTATTGTTGTATCAATTGTATGCATGCGTTGCCAGATCTGGATTTCTTGGAAAAGAAATACAAAAATATGCCGTTCATTGTTGTGGGTGTCCATTCTGCAAAGTTTGATAATGAGAAAGATTCTGAAGCCATTCGCAATGCAGTGCTCCGCTATGACATCACTCACCCAGTTGTCAATGACGGAGATATGTATCTTTGGCGGAATCTGGGCATAAATTCATGGCCAACATTTGCTATCATTGGGCCTAATGGTAATCTCCTTGCACAAATTTCGGGAGAGGGACACAAGAAGGATCTTGATGATTTTGTGGAGGCAGCTCTTCTGTTTTATGGAAAACAGAACATGTTGGACAATACACCACTTACACTGAATTTGGAGAAAGATAACGATCCTCGCCTAGCTACATCTCCTTTGAAGTTTCCAGGAAAGCTAGCAATTGATGTTCTTAACGACAGACTTTTCATTTCAGACAGTACCCACAACCGCATAGTGGTAACAGACCTAGATGGGAATTTTATTGTACAAATTGGGAGCAGTGGAGAGGAAGGTTTACAGGATGGTTCGTTTGATGATGCCGCATTTAACCGCCCTCAGGGTCTTGCTTATAATGCAAAGCAAAATATCCTTTACGTTGCAGACACTGAAAACCATGCTTTGAGAGAGATTGATTTTGTTAATGAGAAAGTACGAACTCTTGCTGGCAATGGGACCAAAGGTTCTGACTATTCTGGTGGAGGGAAAGGAGCCGCTCAGCTCCTCAATTCCCCTTGGGATGTATGCTTTCATCCTATGGAAGAAAAAATTTATATTGCCATGGCTGGCCAGCATCAGATATGGGAGCACAATTTAATAGATGGAATTACAAGAGCGTTTAGTGGTGATGGTTATGAGAGGAATTTAAATGGATCAAGCTCCACAAGCACCTCATTTGCTCAACCTTCTGGCATATCTTTGTCTCAAGATCAAATGGAAGTATATATTGCTGACAGTGAGAGTAGTTCGATTCGAGCTGTTGATCTGAAGACTGGAGGATCAAGGTTACTTGCTGGCGGTGACCCAATCTTCCCAGATAATTTGTTCAAGTTTGGTGATCACGATGGAATAGCCTCTGAAGTACTTCTTCAACATCCACTGGCAGTTTTGTGCGCAAAAGATGGCCAAATTTACATTACAGACAGTTACAATCATAAGATAAAAAAGTTAGATCCAGCTAGTGAAAGAGTTAGCACAATTGCAGGAACAGGGAAAGCTGGATTTAGGGATGGAACAGCTGTAGCAGCTCAGCTCTCGGAACCATCTGGAATTGTTGAAGGGAATAATGGGAGACTATTCATAGCTGATACAAACAACAGCTTAATCCGATATCTGGATTTGAACAACGGAAGTTTGGAACTCCATACTTTGGAGCTTAAAGGCTTTCAGCCTCCTTCACCTAAATCCAGGGTTTTAAAACGTCTAAGGAGACGATCATCAGCAGATACAATGACCATCACTGCCAATGGTGTTTCATCAAATGAAGGACGCTTATCTATTCATGTATCGTTACCAAATGAGTACCATTTCTCAAAGGAAGCACGTAGTAGATTTAGTGTTGATATTGAACCTGAAAATGCCGTCAGTGTTGAACCCCAGGATGGATTCCTTGATGAGGGATCTGCAACTCTTTATTTTCAGAGATCATCTACTTCAGCTTCAATGGGAAGAATTAATTGTAAGATTTACTATTGCAAGGAAGACGAGGTTTGTTTGTATCAATCCTTACAGTTTGAGGTGCCTTTCCGAGAGGCAGAACATAACTCTCCCCGAGCAGATGTCACACTTTTGCATTTGGTGAAACCCAAAGCTTCAGCTAGTGGCTTTTTACAGCCCGTTGCCCCTTGA 3237 0.4263 MVNSSLSRPATTFLFPFNQKGLRPISLPLLRSFHCRPKRLVLSRRLVLKACAKVEENNVAKNSSASEWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFAEMGVQVTVEDFVPFMGTGEANFLGGVASVKGVKGFNPEAAKQRFFEIYLDKYAKPESGIGFPGALELISQCKGKGLKVAVASSADRIKVDANLAAAALPLSLFDAIVSADAFENLKPAPDIFLAASRILNVPPSECLVIEDALAGVQAAKAAKMRCIAVRTTLSDEALESAGPTLIRDDIGSVSLDDILSGGSISHNKRMQGPQSFNNSVQTSSAMPAGNSDDRLSKTSIANGDIFPTKWLQGSRRDVLRFGSLGIAISCLIFTLNNWKAMQYTSPKSIWNLLFGVSQPSLEQNEGRSRSDRIQQFMDYITDLEGKGNAQIVPEFPPKLDWLNTSPLQFGRDLKGKVVLLDFWTYCCINCMHALPDLDFLEKKYKNMPFIVVGVHSAKFDNEKDSEAIRNAVLRYDITHPVVNDGDMYLWRNLGINSWPTFAIIGPNGNLLAQISGEGHKKDLDDFVEAALLFYGKQNMLDNTPLTLNLEKDNDPRLATSPLKFPGKLAIDVLNDRLFISDSTHNRIVVTDLDGNFIVQIGSSGEEGLQDGSFDDAAFNRPQGLAYNAKQNILYVADTENHALREIDFVNEKVRTLAGNGTKGSDYSGGGKGAAQLLNSPWDVCFHPMEEKIYIAMAGQHQIWEHNLIDGITRAFSGDGYERNLNGSSSTSTSFAQPSGISLSQDQMEVYIADSESSSIRAVDLKTGGSRLLAGGDPIFPDNLFKFGDHDGIASEVLLQHPLAVLCAKDGQIYITDSYNHKIKKLDPASERVSTIAGTGKAGFRDGTAVAAQLSEPSGIVEGNNGRLFIADTNNSLIRYLDLNNGSLELHTLELKGFQPPSPKSRVLKRLRRRSSADTMTITANGVSSNEGRLSIHVSLPNEYHFSKEARSRFSVDIEPENAVSVEPQDGFLDEGSATLYFQRSSTSASMGRINCKIYYCKEDEVCLYQSLQFEVPFREAEHNSPRADVTLLHLVKPKASASGFLQPVAP 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0036 1078 PANTHER NHL REPEAT-CONTAINING PROTEIN 2 96 1074 - -
Lele06g0036 1078 SUPERFAMILY NHL repeat 585 914 - -
Lele06g0036 1078 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 169 182 IPR006439 -
Lele06g0036 1078 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 71 82 IPR006439 -
Lele06g0036 1078 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 201 217 IPR006439 -
Lele06g0036 1078 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 219 239 IPR006439 -
Lele06g0036 1078 SUPERFAMILY Thioredoxin-like 418 556 IPR036249 -
Lele06g0036 1078 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 195 257 IPR006439 -
Lele06g0036 1078 FunFam NHL repeat-containing protein 2 575 731 - -
Lele06g0036 1078 CDD HAD_BPGM-like 73 259 - -
Lele06g0036 1078 Gene3D - 812 909 IPR011042 -
Lele06g0036 1078 Gene3D - 562 734 IPR011042 -
Lele06g0036 1078 SMART LY_2 755 797 IPR000033 -
Lele06g0036 1078 SMART LY_2 817 868 IPR000033 -
Lele06g0036 1078 SMART LY_2 583 625 IPR000033 -
Lele06g0036 1078 ProSiteProfiles NHL repeat profile. 826 856 IPR001258 GO:0005515
Lele06g0036 1078 Gene3D Putative phosphatase; domain 2 84 155 IPR023198 -
Lele06g0036 1078 Pfam NHL repeat 646 671 IPR001258 GO:0005515
Lele06g0036 1078 SUPERFAMILY HAD-like 71 280 IPR036412 -
Lele06g0036 1078 Pfam Thioredoxin-like 443 537 IPR012336 -
Lele06g0036 1078 MobiDBLite consensus disorder prediction 297 322 - -
Lele06g0036 1078 FunFam NHL repeat-containing protein 2 398 562 - -
Lele06g0036 1078 FunFam Chloroplast protein HCF243 806 910 - -
Lele06g0036 1078 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 70 279 - -
Lele06g0036 1078 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 70 279 - -
Lele06g0036 1078 Pfam Haloacid dehalogenase-like hydrolase 74 257 IPR041492 -
Lele06g0036 1078 Gene3D - 73 271 IPR023214 -
Lele06g0036 1078 ProSiteProfiles Thioredoxin domain profile. 395 560 IPR013766 -
Lele06g0036 1078 CDD NHL-2_like 628 969 IPR045302 -
Lele06g0036 1078 Gene3D Glutaredoxin 391 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0036 Lele-ChrLele06 241251 276636 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0036 06 241251 276636 Lele06g0036 06 241251 276636 ECH
Lele06g0036 06 241251 276636 Lele07g0232 07 1276788 1280649 hybridization
Lele06g0036 06 241251 276636 Lele08g0037 08 226597 256749 hybridization