Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0025 ATGATTGGAAGCTACTTAAATGTATGTTCTCAAACGGTTTTGTTTGATTCTACTGTGGAAAAAGAATCAGAATGGCAGGATCTGTGTAATGTATGGTATACGCATGTAATCATCATTTCAGTCATCGCTTGGACTGTGGCAGAAGGAGGCCAAGATCTTGTTCTTGGGACTCGACAATGCAGGCAAAACCACATTACTCCATATGCTCAAAGACGAGGGAATAGGGTTGAGTCTTGTTCTTTCTTGCTTTCTTTCTTTTATTTCTCTGGAGATGCTATGCAGTTTGTCAGGGAGGAGACGAAAGATAGGGCAGTCCTGGCAAATTATATGTTATGCTTGAACTTTTCTCGTATTTGTCCTACTCTACTGAAGGTGGATGCAGTGGTGTATTTGGTCGATGCTTATGACAAGGAAAGATTTGCCGAGTCAAAGAAAGAACTGGACGCTCTGCTGTCGGACGAGGTGTTGGCGAGTGTGCCATTCCTGATTCTTGGGAACAAGATTGATATACCATATGCTGCCTCAGAAGATGAATTGCGCTACCACTTGGGGCTGTCCAACTTCACCACCGGCAAGGGTAAGGTTAGCATGGCGGACTCAAATGTGCGCCCCGTGGAGGTTTTCATGTGCAGTATTGTGAGGAAAATGGGTTACGGAGATGGCTTCAAGTGGCTTTCTCAGTACATCAAATGA 693 0.4444 MIGSYLNVCSQTVLFDSTVEKESEWQDLCNVWYTHVIIISVIAWTVAEGGQDLVLGTRQCRQNHITPYAQRRGNRVESCSFLLSFFYFSGDAMQFVREETKDRAVLANYMLCLNFSRICPTLLKVDAVVYLVDAYDKERFAESKKELDALLSDEVLASVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVSMADSNVRPVEVFMCSIVRKMGYGDGFKWLSQYIK 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0025 230 Gene3D - 103 230 IPR027417 -
Lele08g0025 230 ProSiteProfiles small GTPase Arf family profile. 1 229 - -
Lele08g0025 230 Pfam ADP-ribosylation factor family 124 229 IPR006689 GO:0003924|GO:0005525
Lele08g0025 230 PRINTS GTP-binding SAR1 protein signature 114 139 IPR006689 GO:0003924|GO:0005525
Lele08g0025 230 PRINTS GTP-binding SAR1 protein signature 159 180 IPR006689 GO:0003924|GO:0005525
Lele08g0025 230 PRINTS GTP-binding SAR1 protein signature 203 227 IPR006689 GO:0003924|GO:0005525
Lele08g0025 230 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 229 IPR027417 -
Lele08g0025 230 FunFam Ras-related small GTP-binding family protein 118 230 - -
Lele08g0025 230 ProSiteProfiles small GTPase SAR1 family profile. 1 229 - -
Lele08g0025 230 PANTHER RE74312P 122 230 IPR006687 GO:0005525|GO:0006886
Lele08g0025 230 SMART sar_sub_1 32 229 IPR006689 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0025 Lele-ChrLele08 154781 157688 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0218 07 1199766 1201919 Lele08g0025 08 154781 157688 ECH
Lele08g0025 08 154781 157688 Lele08g0025 08 154781 157688 ECH
Lele05g0213 05 1175857 1183763 Lele08g0025 08 154781 157688 hybridization
Lele06g0023 06 160034 162077 Lele08g0025 08 154781 157688 hybridization