Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2047 ATGTTCATCATTCTGAGAAACTCATTGCCAATCTTCCTTCTCTTTATATCTCTATTCCTTTCTCTTTCTTTATCTTCTTCAATCCCAGACTTCACAACTTGCTTGATCCACCACAACATCAACAACTTCACCAGATTCCCTGACCAATCTTCTAATAACACTTATGATGACTACTTCAAAATCCTCAACTTCTCCATACAAAACCCTCGCTTTGCTCAGCTTGACATCCCAAAGCCTATGGCCATTGTTCTGCCAGATAGCTTGGAGCAGCTGAGGAACAGTGTGGTGTGCTGTAGAGAATTCTCTGTAGATATTAGAGTGAGATGTGGTGGACACAGCTATGAAGGGACTTCCTCTGTGGCCAAGGATGGAGCTCCATTTGTCATCATTGACCTCATGAACCTAAACCATGTTGAGGTGGACATGGAGGCTGAGATGGCATGGGTTGAAGGTGGGGCCACCCTGGGAGAGACCTACTACGCGATCTCTCGGGCCAGCAAGGCCCACGGGTTTTCAGCCGGGTCATGTCCAACCGTGGGAGTAGGCGGGCATATCGGGGGAGGTGGGTTTGGGCTTTTGTCAAGAAAATATGGGCTTGCAGCCGATAATGTGGTGGATGCACTTCTTATAGATGCTGATGGGAAGTTACTTAACAGACAAGAAATGGGAGAAGATGTGTTTTGGGCTATTAGAGGAGGTGGTGGTGGTGTTTGGGGCATTGTATATGCATGGAAGATCAAATTACTAAAAGTTCCAGAAGCTGTAACTAGTTTCATACTCTCAAGAACAGGAACAAAAGATCATCTTCTGAAACTAGTTAACAAATGGCAACATGTAGCACCAAAATTAGAAGATGACTATTACTTGTCATGCTTTCTTGGTGCAGGCTTGCCTGAAGCTAAAAAAACTAAAGGCTTATCTGCAACATTTAAAGGGTTTTATCTGGGTCCCAGCCACAAAGCCTTGTCTGTTATAAACCAGGTTTTTCCTGAACTGGGTATTGAAGAAGAAGATTGCAAAGAAATGAGTTGGATTGATTCTATAGTTTTCTTCTCTGGCCTACCAGAAGGAGCCAAAGTTTCTGAATTGAAGAACAGTTTGAGAGATAGAGAGGAGGCCAGAGAAGCAGAAGGAGAGGCAGTCATGGCGAACAAAGAAGCTTCCCTGGTGATTACATTTGGCGAGATGCTTATAGACTTTGTTCCTATGACATCTGGAGTATCATTGGCTGAGTCTCAAGGCTTCATCAAAGCCCCTGGTGGCGCCCCGGCTAACGTTGCTTGTGCCATCGCCAAACTTGGTGGCAACTCAGCCTTCATTGGCAAGGTGGGAGATGATGAGTTTGGGAGGATGCTAGCAGATATACTGAAGAAAAATGGGGTGAACACAGATGGAGTTTGCTTCGATGCCGATGCAAGGACTGCATTGGCTTTTGTGACATTGAGGAATGATGGAGAGAGGGAGTTCATGTTCTACAGGAATCCCAGTGCAGATATGCTTCTGAAGGATTCCGAGTTGAAGATGGACATGATCAAGAAGGCCAAGATATTCCATTATGGCTCAATTAGTCTCATCTCTGATCCTTGCAGATCAGCTCACATGGCAGCCATGAAAGCTGCTAGAGAAGCTGGAGCTTTGCTTTCATATGACCCTAATGTTAGGCTTCCTTTGTGGCCTTCTGCTGAAGCTGCTAGGTCTGGCATTAAAAGTATTTGGTCTGAAGCTGACTTCATCAAGGTAAGTGATGATGAAGTGAACTTCCTTACACAAGGAGATCCTGAAAAGGAAGAGGTTGTTATGTCCCTGTGGCATAATAAGTTGAAGCTTCTCATTGTCACTGATGGAGAAAAGGGTTGCAGATACTTCACCAAGAATTTCAAAGGCAAGATTGCAGGACTCAAAGTGAACACAGTGGACACAACTGGTGCTGGTGATTCTTTTGTTGGTTCACTTCTGGTTTCTGTGGCAAACAACCCCTCCATATTTGATCATGAAGCAAAACTGAAAGAGGCTCTTACATTTGCAAATGCTTGTGCTGCACTCTGCACAACCCAGAAAGGAGCCATACCTGCACTTCCAGCTGCTTCAGATGCTCAGAGTCTCATTTCCAAGTCTTAG 2118 0.4481 MFIILRNSLPIFLLFISLFLSLSLSSSIPDFTTCLIHHNINNFTRFPDQSSNNTYDDYFKILNFSIQNPRFAQLDIPKPMAIVLPDSLEQLRNSVVCCREFSVDIRVRCGGHSYEGTSSVAKDGAPFVIIDLMNLNHVEVDMEAEMAWVEGGATLGETYYAISRASKAHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLIDADGKLLNRQEMGEDVFWAIRGGGGGVWGIVYAWKIKLLKVPEAVTSFILSRTGTKDHLLKLVNKWQHVAPKLEDDYYLSCFLGAGLPEAKKTKGLSATFKGFYLGPSHKALSVINQVFPELGIEEEDCKEMSWIDSIVFFSGLPEGAKVSELKNSLRDREEAREAEGEAVMANKEASLVITFGEMLIDFVPMTSGVSLAESQGFIKAPGGAPANVACAIAKLGGNSAFIGKVGDDEFGRMLADILKKNGVNTDGVCFDADARTALAFVTLRNDGEREFMFYRNPSADMLLKDSELKMDMIKKAKIFHYGSISLISDPCRSAHMAAMKAAREAGALLSYDPNVRLPLWPSAEAARSGIKSIWSEADFIKVSDDEVNFLTQGDPEKEEVVMSLWHNKLKLLIVTDGEKGCRYFTKNFKGKIAGLKVNTVDTTGAGDSFVGSLLVSVANNPSIFDHEAKLKEALTFANACAALCTTQKGAIPALPAASDAQSLISKS 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2047 705 SUPERFAMILY Ribokinase-like 390 699 IPR029056 -
Lele07g2047 705 PANTHER HEXOKINASE FAMILY MEMBER 389 700 - -
Lele07g2047 705 Gene3D - 389 705 IPR029056 -
Lele07g2047 705 Gene3D - 254 342 - -
Lele07g2047 705 Gene3D - 30 135 IPR016167 -
Lele07g2047 705 Gene3D - 139 366 IPR016169 -
Lele07g2047 705 Pfam FAD binding domain 79 217 IPR006094 GO:0050660
Lele07g2047 705 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 420 444 IPR002173 GO:0016773
Lele07g2047 705 FunFam Probable fructokinase-2 386 705 - -
Lele07g2047 705 Pfam pfkB family carbohydrate kinase 389 694 IPR011611 -
Lele07g2047 705 ProSiteProfiles PCMH-type FAD-binding domain profile. 75 251 IPR016166 GO:0071949
Lele07g2047 705 CDD bac_FRK 389 689 - -
Lele07g2047 705 SUPERFAMILY FAD-binding/transporter-associated domain-like 65 252 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2047 Lele-ChrLele07 13730550 13736932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2047 7 356 Miscellaneous Gene Families AT4G20820 43.258 7.07e-83 270
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g2047 07 13730550 13736932 Lele07g2047 07 13730550 13736932 ECH
Lele05g2000 05 14263524 14265151 Lele07g2047 07 13730550 13736932 hybridization
Lele06g1841 06 12938375 12940225 Lele07g2047 07 13730550 13736932 hybridization