Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1841 ATGTTACACAAATGTCTTTTAGGGAAGATTGATTCCTTGGTACTATATTATATAGAAGTTCAATCTCATAATCTTCCGAGTTCCCAATATTATAAAAAACTAAGGCCGGCCTACCATTTGCGCTGTTTTGCTTCATCATACAAATGGCAGAGTAGCTTGCTTGCTTCTTCATCATCACCATCTTCTTCTTCATTTTCTTCCATTCATTCACAATCTCAAGCCACCATGTTCATCATTCTGAGAAACTCATCATCACAAATCTTCCTCCTTTTACTATCTCTATTCATTTCTCTTTCTTTATCTTCTTCAATCCCAGACTTCACAACTTGCTTGACCAACCACAACATCAACAACTTCACCAGATTCCCTGATCAATCCTCTAATAACACTTATGATGACTACTTCAAAATCCTCAACTTCTCCATCCAAAACCCTCGTTTTGCAGAGCTTAACATCCCAAAGCCTATGGCCATTGTTCTGCCAGAGAACTTGGAGCAGCTGAGGAACAGTGTGGTGTGCTGTAGAGAATTCTCTGTAGATATCAGAGTCAGATGTGGTGGACATAGCTATGAGGGAACTTCCTCTGTAGCCAATGATGGAGCTCCATTTGTCATCATTGACCTCATGAACCTAAACCATGTTCATGTGAACATCGAGGCTGAGATGGCATGGGTTGAAGGTGGGGCCACCTTGGGAGAGACCTACTACGAGATCTCTCGGGCTAGCAAGGCCCACGGGTTTTCAGCCGGGTCTTGCCCAACCGTGGGCGTCGGGGGGCATATCGGGGGAGGCGGGTTTGGGCTTTTGTCAAGAAAATATGGGCTTGCAGCAGATAATGTGGTGGATGCCCTTCTCATAGATGCTGATGGGAACTTACTTAACAGACAAGAAATGGGAGAAGATGTGTTTTGGGCTATTAGAGGAGGTGGGGGTGGTGTTTGGGGGATTGTATATGCCTGGAAGATCAAATTGCTAAAAGTTCCAGAAACTGTAACTAGTTTCATAATCTCAAGAACAGGAACAAAAAGTCATCTTCTGAACCTAGTTAACAAATGGCAACATGTAGCACCAAAATTGGAAGATGACTATTACTTGTCATGTTTTCTTGGTGCAGGCTTGCCTGAAGCTAAAAAAACTCCAGGCTTATCTGCAACTTTTAACGGGTTTTATCTGGGTCCTAGCCACAAGGCCATAACTGTTATAAACCAGGTTTTTCCTGAACTGGGTATTGAAGAAGAAGATTGCAAAGAAATGAGTTGGATTGAGTCTATAATTTTCTTCTCTGGCCTACCAAAAGGAGTCAAAGTTTCTGAATTGAAGAACAGGTATATGCAAGACAAGGAATATTTCAAGGCAAAATCAGATTTTGTGAGGAGTCATATTCCTCATGTGGGGATTGAAACTGCTTTAAAAATACTTGAGAAAGAGCCAAAAGGGTATGTAATTTTTGATCCTTATGGTGGAATTATGCAGAAAATAAGCAGTGAATCCATAGCTTTTCCTCACAGAAAAGGAAATCTCTTCACAATTCAGTATCTGATTTACTGGAAAGAAGCTGATAATGAGAGAACCAGTGAATACATTGGGTGGATAAGAGAGTTCTATGATTCTATGACTCCATTTGTTTCATGGGGTCCTAGGGCTGCATATATCAATTACATGGACTTTGATCTTGGAGTAATGGTGGACCACATTAACACGGATGAAGAAGCCAGAGTTTGGGGTGAAAAGTACTTCTTGGGTAACTATAATAGATTGGTTAAAGCCAAAACTTTGATTGATCCTAATAATGTTTTCACTCATCAACAAGGCATTCCTCCTTTATCTTCTTCTTCCATTAGTTCAATGTGA 1851 0.4079 MLHKCLLGKIDSLVLYYIEVQSHNLPSSQYYKKLRPAYHLRCFASSYKWQSSLLASSSSPSSSSFSSIHSQSQATMFIILRNSSSQIFLLLLSLFISLSLSSSIPDFTTCLTNHNINNFTRFPDQSSNNTYDDYFKILNFSIQNPRFAELNIPKPMAIVLPENLEQLRNSVVCCREFSVDIRVRCGGHSYEGTSSVANDGAPFVIIDLMNLNHVHVNIEAEMAWVEGGATLGETYYEISRASKAHGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLIDADGNLLNRQEMGEDVFWAIRGGGGGVWGIVYAWKIKLLKVPETVTSFIISRTGTKSHLLNLVNKWQHVAPKLEDDYYLSCFLGAGLPEAKKTPGLSATFNGFYLGPSHKAITVINQVFPELGIEEEDCKEMSWIESIIFFSGLPKGVKVSELKNRYMQDKEYFKAKSDFVRSHIPHVGIETALKILEKEPKGYVIFDPYGGIMQKISSESIAFPHRKGNLFTIQYLIYWKEADNERTSEYIGWIREFYDSMTPFVSWGPRAAYINYMDFDLGVMVDHINTDEEARVWGEKYFLGNYNRLVKAKTLIDPNNVFTHQQGIPPLSSSSISSM 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1841 616 SUPERFAMILY FAD-binding/transporter-associated domain-like 142 328 IPR036318 GO:0050660
Lele06g1841 616 Pfam Berberine and berberine like 549 606 IPR012951 GO:0016491|GO:0050660
Lele06g1841 616 Gene3D - 106 211 IPR016167 -
Lele06g1841 616 Pfam FAD binding domain 155 293 IPR006094 GO:0050660
Lele06g1841 616 Gene3D - 215 607 IPR016169 -
Lele06g1841 616 Gene3D - 330 545 - -
Lele06g1841 616 ProSiteProfiles PCMH-type FAD-binding domain profile. 151 327 IPR016166 GO:0071949
Lele06g1841 616 PANTHER OS08G0158400 PROTEIN 101 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1841 Lele-ChrLele06 12938375 12940225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1841 83 609 Miscellaneous Gene Families AT4G20820 42.272 7.51e-134 400
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1841 06 12938375 12940225 Lele06g1841 06 12938375 12940225 ECH
Lele06g1841 06 12938375 12940225 Lele07g2047 07 13730550 13736932 hybridization
Lele06g1841 06 12938375 12940225 Lele08g1840 08 12793706 12795706 hybridization