Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1879 ATGAACATGTCGGAAGGCGGAAAACAAGACATGGGATTGCGAAGAAGTCATGAAGTCATAGAAGAATGTAAGAGACAACTAAGACTGGCACTTCCTCTCTTCTCAGTGGGTCTCTTACAGTTCAGTTTGCAAACAATATCTCTCATTTTTGTTGGTACTCTCCCTCTCTCTGCTGCTTCCATGGCCACTTCCTTCGCTTCTGTCACTGGCTTCTCCTTGCTGATGGGATTGGCAAGTTCACTGGACACTTTTTGCGGTCAATCTTATGGAGCAGGACAGTTCCATATGCTTGGCATACACATGCAAAGACCCATGCTCGTTCTTTCACTGACCAGTGTAGTCCTTGCACTAATATGGGCAAACACAGAACGAATTCTTGTGGCTATGAAGCAAGTTGCAGCTCTGTTTCACCTTATTTTTTGTTGGCTTTTGATGTTCAAATCAGGACTTGGAAGTCAAGGAGCAGCCATAGCACTTTCTTTGTCTTCTTCGGTAAATGTGGTGTTAATGGCACTGTATGTGAGGTTCTCTTCTTCATGCAAAGAATCATGGACTGGTTTCTCAAAGAAGGCTCTCCACAATGTCCTTGAATTCCTTAGACTTGCAGTTCCTTCTGCTATCATGCTCTGCACGCGAGTGTCAAATGAATTAGGGGCAGGCAATGCAAAGGCTGCAAGTTTAGCAGTTCGGGTGGCGTTAGGCATAGCCTTAAGTGAGGGCATTGTGAGAGGGTGTGGATGGCACAAGATTGGAGCCTATGTGAACCTGACATCCTTTTATCTTGTCGGAGTTCCTTGTTCTGTCGCATTAGCTTTCATTATGCACATGAATGCCAAGGGGCTGTGGCTGGGGATCGTGGTCGCTTTTACACTGCAAGTGGTATTTTGCCTTGTCATCACCCTTCGCACTGATTGGGAGAAAGAAGCAAAGGAAGCTCAGAGTAGAGCAAAGTGTCCAGCCATATCTGTCACAGACACTTCAATTGTCATTAAACTCTTTGAAGAGAGTGCTGAGGTGGGTTCCAATCAACAGTTATCTGTTTCACTTCTTGTTTTGAAAAAGCTAACAAGTGGAAGCACAGAACGAAGACGCACAGTGAAGAAATCGGGAAGTGAAAAACAAGACATGGTATTGCGAAGAAGACATATGGTAATGGAAGAATGTAAGAGACAACTAAGCCTCGCACTTCCTCTCTTCTCAGGGGGTCTCTTGCAGTACAGTTTGCAAACCATATCTCTCATTTTTGTTGGTAAACTTGGTACCCTGTCTCTCTCTGCTGCTTCCGTGGCCACTTCCTTTGCTACCGTCACTGGCTTCTCCTTGCTGAACATATTTAATATCACTAAACCTATGAATGAATTCAACCTCGGTTTGTCATCTTTAGTTACTTGCTGGTTTAATTTACGATTAATTGAACAGATGGGATTAGCAAGTGCACTGGACACCTTTTGTGGTCAATCATATGGAGCAGGGCAGTACCATATGCTAGGCATACTCATGCAAAGATCCATGCTCATTCTTTCACTGATCAGTGTATTCATTGCAGTAATCTGGGGAAACACAGAACCAATTCTTGTGGCTATGAAGCAAGATAAACTCATATCAAAAGAAGCAGGATCATACGCCTATTGCATGATTCCGAGCCTCTTCGCTTTTGGCATCCTTCAATCCATTATGAAATTCTTGCAAACCCAAAACCTTGTCTTTCCCATGATGATAACTTCTGCAGTTGCAGCTCCGTTTCACGGCATCTTTTGTTGGCTTTTGATGTTCAAATCAGGACTTGGAAGCCGAGGAGCAGCCATAGCACTTTCTTTGTCTTATTGGGTAAATGTGGTGTTAATGGCACTGTATGTGAGGTTCTCTTCTTCATGCAAAGAATCATGGACTGGTTTCTCAAAGAAGGCTCTCCACAATGTCCTTGACTTCCTTAAACTTGCTGTTCCTTCTGCCATTATGCTCTGCATACGAGTGTCAAATGAACTAGGGGCAGGAAATGCAAAAGCTGCAAGTTTAGCAGTTCGGGTGGCGTTAGGCATAGCATTAAGCGAGGCTACGTTATTACTTGTGGTGATGATTCTGCTTCGAAATCTCTTGGGACGAGTTTATAGCAATGACAAACAAGTAGTAAGACATGTGGCCTCCATGATACCAGTTTTGGCCATTTCTTGCTTCTTTGATGGTATTGTGAGGGGGTGCGGATGGCAGAATATTGGAGCGTATGTGAACCTAGCATCCTTTTATCTTGCCGGTGTTCCTTGTTCTGTCATATTAGCTTTCGTTGTGCACATGAATGCTAAGGGGCTGTGGTTGGGGATCGTGGTTGCTTTTACATTGCAAGTGGTATTTTTCTTAACCATCACAATTCGCACTGATTGGGAGAAAGAAGCAAAACAAGCTCAGAGTAGAGTGGAGTTTTCAACTATCTCCCTCTCAAGCACTGCCCCAAGTGATCAAATATTGCCATCTCAATCACATGCAGCATAA 2487 0.4383 MNMSEGGKQDMGLRRSHEVIEECKRQLRLALPLFSVGLLQFSLQTISLIFVGTLPLSAASMATSFASVTGFSLLMGLASSLDTFCGQSYGAGQFHMLGIHMQRPMLVLSLTSVVLALIWANTERILVAMKQVAALFHLIFCWLLMFKSGLGSQGAAIALSLSSSVNVVLMALYVRFSSSCKESWTGFSKKALHNVLEFLRLAVPSAIMLCTRVSNELGAGNAKAASLAVRVALGIALSEGIVRGCGWHKIGAYVNLTSFYLVGVPCSVALAFIMHMNAKGLWLGIVVAFTLQVVFCLVITLRTDWEKEAKEAQSRAKCPAISVTDTSIVIKLFEESAEVGSNQQLSVSLLVLKKLTSGSTERRRTVKKSGSEKQDMVLRRRHMVMEECKRQLSLALPLFSGGLLQYSLQTISLIFVGKLGTLSLSAASVATSFATVTGFSLLNIFNITKPMNEFNLGLSSLVTCWFNLRLIEQMGLASALDTFCGQSYGAGQYHMLGILMQRSMLILSLISVFIAVIWGNTEPILVAMKQDKLISKEAGSYAYCMIPSLFAFGILQSIMKFLQTQNLVFPMMITSAVAAPFHGIFCWLLMFKSGLGSRGAAIALSLSYWVNVVLMALYVRFSSSCKESWTGFSKKALHNVLDFLKLAVPSAIMLCIRVSNELGAGNAKAASLAVRVALGIALSEATLLLVVMILLRNLLGRVYSNDKQVVRHVASMIPVLAISCFFDGIVRGCGWQNIGAYVNLASFYLAGVPCSVILAFVVHMNAKGLWLGIVVAFTLQVVFFLTITIRTDWEKEAKQAQSRVEFSTISLSSTAPSDQILPSQSHAA 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1879 828 CDD MATE_eukaryotic 387 799 IPR045069 GO:0042910|GO:1990961
Lele07g1879 828 Pfam MatE 32 139 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele07g1879 828 Pfam MatE 656 756 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele07g1879 828 Pfam MatE 473 588 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele07g1879 828 PANTHER MULTIDRUG RESISTANCE PROTEIN 133 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1879 Lele-ChrLele07 12065048 12071442 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1879 07 12065048 12071442 Lele07g1879 07 12065048 12071442 ECH
Lele05g1809 05 12161354 12164708 Lele07g1879 07 12065048 12071442 hybridization
Lele06g1682 06 11369004 11372132 Lele07g1879 07 12065048 12071442 hybridization