Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1682 ATGGAGAAATCAGGAAGCCAAAAAGAAGGCATGATGGAACTGCGAAGAAGCCATAAAGTTTTACAAGAAGGCAAGAAACAACTAAGCCTAGCACTTCCTCTCTTCTCAGTGGGTCTCTTACAGTATAGTTTGCAAACCATCTCTCTCGTGTTTGTTGGTCATCTAGGTACCATCTCTCTCTCTGCTGCTTCCATGGCCACCTCCTTCGCTTCTGTCACTGGCTTCAACTTGCTGATGGGATTAGGAAGTGCACTGGACACCTTTTGTGGTCAATCATATGGAGCAGCACAGTTCCATATGCTAGGCATACACATGCAAAGATCCATGTTCGTTCTTTCACTGAGCAGTGTATTCCTTGCACTAATATGGGCAAACACAGAACCAATTCTTGTGGCTATGAAGCAAGATAAACTCATATCGAAAGAAGCAGGATCATACAACTATTCCATGATTCCAAGCCTCTTCGCATTTGGCATCCTTCAATCCATTATGAAATTCTTGCAAACCCAAGACATTGTTTGGCCCATGATGATAACTTCTGGAGTTGCAACACTCTTTCACGCCCTTTTTTGTTGGCTTTTGACGTTCAAATTAGGACTTGGAAGTCGAGGAGCAGCCATAGCAATTTCTTTGTCTTATTGGGTGAATGTGGTGTTAATGGCACTGTATGTGAGGTTCTCTTCTTCCTGCAAAGCATCATGGACAGGTTTCTCAAAGAAGGCTCTCCACAATGTCCTCGACTTCCTTAAACTTGCAGTTCCTTCTGCTATTATGCTCTGCTTGAAAGTGTGGACGTTTGAGCTGATGGTACTATTGTCAGGCCTTCTTCCTAATCCAACTCTACAAACCTCTGTGCTTTCGATATGCCTCAATATGTTCAATGTAGCTTGGATGATCCCATTTGGTTTGACTGCTGCAGTAAGCATACGAGTGTCAAATGAACTAGGGGCAGGGAATGCAGAAGCTGCAAGTTTAGCAGTTCGGGTGGTGTTAGGCATAGCCTTAAGTGAGGGTACTTTATTACTTCTACTGATGATTCTGCTTCAAAATCTCGTGGGAAGAGTCTATAGCAATGACAAAGAAGTAGTGAGACATGTGGCCTCCATGATACCAGTTTTGGCCATTTCTTGCTTCCTTGATGGGATTCAAAGTGCTTTTTCAGGCATGGTGAGAGGGTGTGGATGGCAGAAGATTGGAGCGTATGTGAACCTGGCATCGTTTTATCTTGCTGGTGTTCCTTGTTCTGTCATATTAGCTTTTGTTGTGCACATGAATGCCAAGGGGCTGTGGTTGGGAATCGTGGTTGCTTTTACACTTCAAGTGGCATTTTTCTTAGTCATCACAATTCGAACTGATTGGGAGAAAGAAGCAAAGGAAGCTCAGGGTAGAGTGGAGCGTTCAACTATCTCCCTCTCAAGCCCTGCACCAAGTGATCAAATATTATCATCTCAATCACAAGCAGCATAA 1467 0.4369 MEKSGSQKEGMMELRRSHKVLQEGKKQLSLALPLFSVGLLQYSLQTISLVFVGHLGTISLSAASMATSFASVTGFNLLMGLGSALDTFCGQSYGAAQFHMLGIHMQRSMFVLSLSSVFLALIWANTEPILVAMKQDKLISKEAGSYNYSMIPSLFAFGILQSIMKFLQTQDIVWPMMITSGVATLFHALFCWLLTFKLGLGSRGAAIAISLSYWVNVVLMALYVRFSSSCKASWTGFSKKALHNVLDFLKLAVPSAIMLCLKVWTFELMVLLSGLLPNPTLQTSVLSICLNMFNVAWMIPFGLTAAVSIRVSNELGAGNAEAASLAVRVVLGIALSEGTLLLLLMILLQNLVGRVYSNDKEVVRHVASMIPVLAISCFLDGIQSAFSGMVRGCGWQKIGAYVNLASFYLAGVPCSVILAFVVHMNAKGLWLGIVVAFTLQVAFFLVITIRTDWEKEAKEAQGRVERSTISLSSPAPSDQILSSQSQAA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1682 488 CDD MATE_eukaryotic 23 459 IPR045069 GO:0042910|GO:1990961
Lele06g1682 488 PANTHER MULTIDRUG RESISTANCE PROTEIN 18 453 - -
Lele06g1682 488 TIGRFAM matE: MATE efflux family protein 33 430 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele06g1682 488 MobiDBLite consensus disorder prediction 460 488 - -
Lele06g1682 488 MobiDBLite consensus disorder prediction 465 488 - -
Lele06g1682 488 Pfam MatE 254 416 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele06g1682 488 Pfam MatE 33 193 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1682 Lele-ChrLele06 11369004 11372132 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1682 06 11369004 11372132 Lele06g1682 06 11369004 11372132 ECH
Lele06g1682 06 11369004 11372132 Lele07g1879 07 12065048 12071442 hybridization