Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1809 ATGGCCCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATGCTTTACAAGCGGGCTGTTCTTGGCTTTTATATCTGCTCCCTGCCTTTGTGCCTCTCACTGTGGTCGATGTGGAACTCTTGGCAGTCCCAAGCACTGCTGTGTGCTGTAACAGAACGAAGACTCACCGTGATGAAGATGTCGGAGAGCGGAAAACAAGACATGGGATTGCGAAGAAGTCATGAAGTCATAGAAGAATGTAAGAGACAACTAAGACTGGCACTTCCTCTCTTCTCAGTGGGTCTCTTACAGTTCAGTTTGCAAACAATCTCTCTCATTTTTGTTGGTAAACTTGGTACTCTCCCTCTCTCTGCTGCTTCCATGGCCACTTCCTTTGCTTCTGTCACTGGCTTCTCCTTGCTGATGGGATTAGCAAGTGCACTGGACACTTTTTGTGGTCAATCTTATGGAGCAGGACAGTTCCATATGCTTGGCATACACATGCAAAGATCCATGCTCGTTCTTTCACTGGCCAGTGTAGTCCTTGCACTAATATGGGCAAACACAGAACCAATTCTTGTGGCTATGAAGCAAGATAAACTCATATCAAAAGAAGCAGGATCATACGCCTCTTGCATGATTCCGAGCCTGTTTGCATTTGGCATCCTTCAATCCATTATGAAATTCTTGCAAACCCAAAACATTGTCTTTCCTATGACGATAACTTCTGCAGTTGCAGCTCTGTTTCACCTTATTTTTTGTTGGCTTTTGATGTTCAAATCAGGACTTGGAAGTCAAGGAGCAGCCATAGCACTTTCTTTGTCTTCTTCGGTAAATGTGCTGTTAATGGCACTGTATGTGAGGTTCTCTTCTTCATGCAAAGAATCATGGACTGCTTTCTCAAAGAAGGCTCTCCACAGTGTCCTTGAATTCCTTAAACTTGCAGTTCCTTCTGCTATCATGCTCTGCTTGAAAGTGTGGACGTTTGAGCTGATGGTGCTATTGTCAGGCCTTCTTCCTAATCCAACTCTACAAACTTCGGTGCTTTCAATCTGCCTCAATATGTTTGGTGTTGCTTGGATGGTCCCATTTGGATTTAGTGCAGCAATAAGCACGCGAGTGTCAAATGAATTAGGGGCAGGCAATGCAAAGGCTGCAAGTTTAGCAGTTCGGGTGGCGTTAGGCATAGCCTTAAGTGAGGGTATGTTATTACTTGTAGTGATGATTCTGCTTCGAAATATCGTGGGACGAGTTTATAGCAATGACAAACAAGTAGTGAGACATGTGACATCCATGACACCTGTTTTGGCCATTTCTTGCTTCCTTGATGGCATCCAAAGCGCTCTTTCAGGCATTGTGAGAGGGTGTGGGTGGCAAAAGATTGTAGCCTATGTGAACCTGACATCCTTTTATCTTGTCGGAGTTCCTTGTTCTGTCGCATTAGCTTTCATTGTGCACATGAATGCCAAGGGGCTGTGGCTGGGGATCGTGGTCGCTTTTACACTGCAAGTGGTACTTTTCCTTGTCATCACACTTCGAACTGATTGGGAGAAAGAAGCAAAGGAAGCTCAGAGTAGAGCAAAGTGTCCAGCCATATCTGTCGCAGACACTGTCCCAAGTGATCAAATATTAGCATCTCAGCAACATGCACCATAA 1671 0.4452 MAHVSDIKLIRTDTTLDLSQKAEKGMLYKRAVLGFYICSLPLCLSLWSMWNSWQSQALLCAVTERRLTVMKMSESGKQDMGLRRSHEVIEECKRQLRLALPLFSVGLLQFSLQTISLIFVGKLGTLPLSAASMATSFASVTGFSLLMGLASALDTFCGQSYGAGQFHMLGIHMQRSMLVLSLASVVLALIWANTEPILVAMKQDKLISKEAGSYASCMIPSLFAFGILQSIMKFLQTQNIVFPMTITSAVAALFHLIFCWLLMFKSGLGSQGAAIALSLSSSVNVLLMALYVRFSSSCKESWTAFSKKALHSVLEFLKLAVPSAIMLCLKVWTFELMVLLSGLLPNPTLQTSVLSICLNMFGVAWMVPFGFSAAISTRVSNELGAGNAKAASLAVRVALGIALSEGMLLLVVMILLRNIVGRVYSNDKQVVRHVTSMTPVLAISCFLDGIQSALSGIVRGCGWQKIVAYVNLTSFYLVGVPCSVALAFIVHMNAKGLWLGIVVAFTLQVVLFLVITLRTDWEKEAKEAQSRAKCPAISVADTVPSDQILASQQHAP 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1809 556 CDD MATE_eukaryotic 91 527 IPR045069 GO:0042910|GO:1990961
Lele05g1809 556 Pfam MatE 101 261 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele05g1809 556 Pfam MatE 322 483 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele05g1809 556 TIGRFAM matE: MATE efflux family protein 101 498 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele05g1809 556 PANTHER MULTIDRUG RESISTANCE PROTEIN 86 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1809 Lele-ChrLele05 12161354 12164708 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1809 05 12161354 12164708 Lele05g1809 05 12161354 12164708 ECH
Lele05g1809 05 12161354 12164708 Lele07g1879 07 12065048 12071442 hybridization