LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele07g1584	ATGTTTCTTGTCGGTAGAGGCGGTGATGCTGCTGGCAGCGCCGCACCTCGAGGCCGCAGAATTATCATGAAGAAAGGGAAGGGGAAGAACAACGGCTTGTTGCCGAATTCGTTGAGGATTATCTCTTCCTGCCTCAAGACTGTGTCTACGAATGCTAGCACCGTTGCTTCTACAGTACGCTCTGCTGGCGCCTCCGTTGCTGCTTCCATCTCATCTCCTGCTGAGGATCACAAGGATCAGGTAATATGGGCTGGTTTTGATAGGCTGGAGCTTGAGCAGTCTATCTTTAAGCATGTTCTTTTGCTTGGTTATCTGAATGGATTTCAAGTTCTTGAGGTGGAGGAGGCCGCTAGCTTCGGTGAACTGGTCTCAAAGCGTGATGGGCCTGTTTCTTTCTTACAGATGCAACCTTTCCCTGTAGGCACTGATGGCCAGGAAGGATTTAGAAACTCACATCCTTTACTGCTGGTTGTTGCTGGTGACAACTCCAACAGTAATATCCAAAGCCGTTCCCATTTGATTGGTAATTCGGAGGCTCAATCTGGGAGCGTCAACTCTGCAACAGCTGTTTGGTTTTACTCCCTTAAGTCTCATAGTTATGTCCATATTCTGAGATTTCGGTCCACAGTCTGTATGATCAGATGCAGTTCTCGCATAGTCGCTGTTGGTCTTGCCACACAAGTATATTGCTTTGATGCATTGACTCTTGAGAATAAATTTAGTGTGCTCACCTATCCTGTTCCCCAGCTATCAGGACAAGGAACAGCAAGTGTTAATGTTGGTTATGGTCCACTGGCTGTGGGTCCAAGGTGGTTAGCATATGCTTCTAACAGTCCACTGCCCTTAAATGTCAGCCGCTTGAGCCCGCAAAACATGAGTCCTTCTCCAGGGGTTAGTCCGTCAACATCTCCTGGCAGTGGTAGTTTAGTTGCTCGTTATGCAATGGAGTCTGGCAAACATCTGGCTTCTGGAATAATCAAATACTGTCAAGAGCTGCTTCCTGATGGTTCTAGTTCTCCAGTCCCGTCAAATTCAGGTTGGAAAGTTGGTAGGGTTGCAGGAATGGACATGGATAATGCAGGAACGGTTGTTGTGAAAGATTTTGTATCCAGAGCCATCATTTCACAATTTAAGGCGCACACTAGTCCTATATCTGCACTATGTTTTGACCCTAGTGGGACCCTTCTGGTCACTGCATCAGTGTATGGGAATAACATCAACATCTTCCGGATAATGCCATCATGCACACGCAAGGGATCAGGTGTTCCAAGCTATGACTGGAGCTCTTCTCATGTGCATCTTTACAAACTTCATCGTGGGATAACATCAGCTATGATCCAGGATATTTGTTTCAGTCATTTTAGCCAATGGATTGCCATTGTTTCATCCAAGGGGACATGTCATCTTTTTGTTTTGTCTCCCTTTGGAGGTGGTACTGGTTTCCGAATTATTAATTCTCAGGGTGAAGAACCCTCCTTTCTTCCAGTTTTATCTCTACCTTGGTGGTCCACGTCATATTCCATGTCTGATCAGCAATCTTTGCCTCCTCCGGCACCTGCTGTGCTTTCTGTAGTGTGCCGCATAAAATATAGCAGTTTTGGATGGCTTAATACAGTGCATAGTTCTGCTGCTAATGTGACAGGAAAAGTTTTTGTGCCCTCCGGTGCTCTTGCTGCTGTCTTTCATAATTCATTATCTCACTCACATCACCAAGTCAATATGAAGGCAAAGCCCCTTGAGCATCTGTTGGTCTACACGCCATCTGGTCATGTTGTTCAACACGAACTTCTGCCTTCTGTTGGCCCAGAACCTAGTGATAGCGGTTCAATAACCCAGTCAGCTTCACTCATGCACATGCAAGATGACGAGTTCAGAGTAAAAGTTGAACCTATCCAGTGGTGGGATGTATGTAGAAGGTTAGAATGGCCAGAGCGAGGGGATCCTTCTGGCAATACCTTTGATAGACAAGATGGTACTGAGATAGTTCAAGAGAAAACATGCTCTGCTGATGGCAATGAATTGGATTATTTGGATATAAATGATGTTGTTGGGGAACAGGTGGTAATATGCTCTACTGAAATGGCCCAAGAAAGATCCCAGTGGTATCTATCTAATGCTGAGGTACAGGTAAACTTTGGAAGGCTTCCCATATGGCAAAAGTCTAAGATTTGCTTCTATACAATGAATTCTGTGAGAACTAGTACTGTTGCTAGTGGAGAGTCTGAAATTGAACAGATCTCTGTCAACGAAATTGAAATAAAACGGAAGGAGTTGTTGCCTGTTTTTGACCATTTCCATAGCATCAGACCGAGCTGGAATGAGAGAGGTTTTTCTGGGGAAAGATCTTCAAGTTCTTCATCTTCAGTTTCTCATCAGGCTGAAGACAAGACAACTGCTGAAGTGACAGTTATTTGTCACTCAAAGCCAGCGTCACTCAGCTCTACTGAAAGCTCTGATGGGGGTTCATCTAGAAGAACTGAAAATTTCTTTGAACTGGATCAAGTTGCATCTAGTTGTCAGATGTTTAATGAGACCTACTTGGAACGGATGGGGGCAATCATCGTTGAGCCTTCCCTGCAGAACCATATCTTGCCAGAAAATTTATCATTCCTTTCTGGAGATTTGAAGCCTGTTGATGTACATGCGGACCGTAGCATCCAAAGCAGTTTATCAGTTCAGGGGAATAGGGTAACACCCGGAATGCAAGAAGATGCAGGTGTTGGGATCAATGGTGGTTCAAGGCCAGTACCAGACCAAGATGCTCCCTCAGGGAAACTTCCGGAGGTGCCATTAATAATGCACGATACGGGAGTTGTGGGTCAATCTTTCCAGGATGACCACTGCAAGACACTGGAGCATCATGGAAGTGACTCATTGACTGAAGTTGTAACCGATGATGTTGATGGCAGCAGTGGCCGACATGAAAGGGAGGATGAAGAAGATGGGGAAATGCTTGGTGGCATATTTGCCTTTTCTGAAGAAGGTAAAAACTTAGGCTGGAGCTGCAATTGCAGCTATCCTGTAACTCTTATGTGTAACTCTTATGTTATCATCCCACATGCAGTCATAATATGA	3075	0.4507	MFLVGRGGDAAGSAAPRGRRIIMKKGKGKNNGLLPNSLRIISSCLKTVSTNASTVASTVRSAGASVAASISSPAEDHKDQVIWAGFDRLELEQSIFKHVLLLGYLNGFQVLEVEEAASFGELVSKRDGPVSFLQMQPFPVGTDGQEGFRNSHPLLLVVAGDNSNSNIQSRSHLIGNSEAQSGSVNSATAVWFYSLKSHSYVHILRFRSTVCMIRCSSRIVAVGLATQVYCFDALTLENKFSVLTYPVPQLSGQGTASVNVGYGPLAVGPRWLAYASNSPLPLNVSRLSPQNMSPSPGVSPSTSPGSGSLVARYAMESGKHLASGIIKYCQELLPDGSSSPVPSNSGWKVGRVAGMDMDNAGTVVVKDFVSRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCTRKGSGVPSYDWSSSHVHLYKLHRGITSAMIQDICFSHFSQWIAIVSSKGTCHLFVLSPFGGGTGFRIINSQGEEPSFLPVLSLPWWSTSYSMSDQQSLPPPAPAVLSVVCRIKYSSFGWLNTVHSSAANVTGKVFVPSGALAAVFHNSLSHSHHQVNMKAKPLEHLLVYTPSGHVVQHELLPSVGPEPSDSGSITQSASLMHMQDDEFRVKVEPIQWWDVCRRLEWPERGDPSGNTFDRQDGTEIVQEKTCSADGNELDYLDINDVVGEQVVICSTEMAQERSQWYLSNAEVQVNFGRLPIWQKSKICFYTMNSVRTSTVASGESEIEQISVNEIEIKRKELLPVFDHFHSIRPSWNERGFSGERSSSSSSSVSHQAEDKTTAEVTVICHSKPASLSSTESSDGGSSRRTENFFELDQVASSCQMFNETYLERMGAIIVEPSLQNHILPENLSFLSGDLKPVDVHADRSIQSSLSVQGNRVTPGMQEDAGVGINGGSRPVPDQDAPSGKLPEVPLIMHDTGVVGQSFQDDHCKTLEHHGSDSLTEVVTDDVDGSSGRHEREDEEDGEMLGGIFAFSEEGKNLGWSCNCSYPVTLMCNSYVIIPHAVII	1024

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele07g1584	1024	Pfam	Breast carcinoma amplified sequence 3	517	760	IPR022175	-
	Lele07g1584	1024	MobiDBLite	consensus disorder prediction	776	795	-	-
	Lele07g1584	1024	SMART	WD40_4	428	471	IPR001680	GO:0005515
	Lele07g1584	1024	SMART	WD40_4	370	410	IPR001680	GO:0005515
	Lele07g1584	1024	MobiDBLite	consensus disorder prediction	775	795	-	-
	Lele07g1584	1024	Pfam	WD domain, G-beta repeat	375	402	IPR001680	GO:0005515
	Lele07g1584	1024	Gene3D	-	297	520	IPR015943	GO:0005515
	Lele07g1584	1024	PANTHER	BREAST CARCINOMA AMPLIFIED SEQUENCE 3	25	981	IPR045142	GO:0006914
	Lele07g1584	1024	SUPERFAMILY	WD40 repeat-like	187	470	IPR036322	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele07g1584	Lele-ChrLele07	9792196	9797632	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele07g1584	07	9792196	9797632	Lele07g1584	07	9792196	9797632	ECH
	Lele05g1525	05	9782162	9787597	Lele07g1584	07	9792196	9797632	hybridization
	Lele06g1376	06	8861156	8866994	Lele07g1584	07	9792196	9797632	hybridization