Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1525 ATGAAGAAAGGGAAGGGGAAGAACAACGGCTTGTTGCCGAATTCATTGAGGATTATCTCTTCCTGCCTCAAGACTGTGTCTACGAATGCTAGCACCGTTGCTTCTACAGTACGCTCTGCTGGCGCCTCCGTTGCTGCTTCCATCTCATCTCCTTCTGAGGATCACAAGGATCAGGTAATATGGGCTGGTTTTGATAGGCTGGAGCTTGAGCAGTCTATCTTTAAGCGTGTTCTTTTGCTTGGTTATGTGAATGGATTTCAAGTTCTTGACGTGGAGGAGGCCTCTAGCTTCAGTGAACTGGTCTCAAAGCGTGATGGGCCTGTTTCTTTCTTACAGATGCAACCTTTCCCTGTAGGCACTGATGGCCAGGAAGGATTTAGAAACTCACATCCTTTACTGCTGGTTGTTGCTGGTGACAACAGCAGTAATATCCAAAACCACGGCCATTTGGTTGGTAATTCGGAGGCTCAATCTTGGAGCGTCAACTCTGCAACAGCTGTTCAGTTTTACTCCCTAAAGTCTCATAGTTATGTCCATATTCTGAGATTTCGGTCCACAGTCTGTATGATTAGATGCAGTTCTCGCATAGTAGCTGTTGGTCTTGCCACACAAGTATATTGCTTTGATGCATTGACTCTTGAGAATAAATTTAGCGTGCTCACCTATCCTGTTCCTCGGCTAGCAGGACAAGGAACAGCAAGTGTTAATGTTGGTTATGGTCCACTGGCTGTGGGTCCAAGGTGGTTAGCATATGCTTCTAACAGTCCACTGCCCTTAAATGTCGGCCGCTTGAGCCCGCAAAACCTGATTCCTTCTCCAGGGGTTAGTCCATCAACATCTCCCCGCAGTGGTAGTTTAGTTGCTTGTTATGCAATGGAGTCTGGCAAACATCTGGCTTCGGGAATTATCAAATACTGTCAAGAGCTGCTTCTTGATGGTTCTAGTTCTCCAGTCCTGTCAAATTCAGGTTGGAAAGTTGGTAGGGTTGCAGGAATGGACATGGATAATGCAGGAACGGTTGTTGTGAAAGATTTTGTATCCAGAGCCATCATTTCACAATTTAAGGCGCACACTAGTCCTATATCTGCACTATGTTTTGACCCTAGTGGGACCCTTCTGGTAACTGCATCAGTCTATGGGAATAACATCAACATCTTCCGGATAATGCCATCATGCACACGCAAGGGATCAGGTGTTCCAAGCTATGACTTGAGCTCTTCTCATGTGCATCTTTACAAACTTCATCGGGGGATAACATCAGCTATGATCCAGGACATTTGTTTCAGTCATTTTAGCCAATGGATTGCCATTGTTTCATCCAAGGGGACTTGTCATCTTTTTGTTTTGTCTCCCTTTGGAGGTGGTACTGGTTTCCGAATTATTAATTCTCAGGGTGAAGAACCCTCCTTTCTTCCAGTTTTATCTCTGCCTTGGTGGTCCACATCATCTTCCATTTCTGATCAGCAATCTTTGCCTCCTCCGGCACCTGCTGTGCTTTCTGTAGTGTGTCGCATAAAATATAGCAGTTTTGGATGGCTTAATACAGTACATAGTTCTGCTGCTAATGTGACAGGAAAAGTTTTTGTGCCCTCCGGTGCTCTTGCTGCTGTTTTTCATAATTCATTATCTCACTCACAGCACCAAGTCAATATGAAGGCAAAGCCCCTTGAGCATCTATTGGTCTACACACCATCTGGTCATGTTGTTCAACACAAACTTCTGCCTTCTGTTGGTCCAGAACCTAGTGATAGTGGTTCAATAACCCAGTCAGCTTCACTCATGCACATGCAAGATGACGAGTTCAGAGTAAAAGTTGAACCTATCCAGTGGTGGGATGTATGTAGAAGGTTAGAATGGCCAGAGCGAGGGGATCCTTCTGGCAATACCTTTGATAGACAAGATGGTACTGAGATAGTTCAAGAGAAAACACGCTCTCCTGATGGCAATGAATTGGATTATTTGGATATAAATGATGGTGTTGGGGAAAAGGCGGTAATGTTCTCTACTGGAATGGCCCAAGAAAGATCCCAGTGGTATCTATCTAATGCTGAGGTACAGTTAAACTTTGGAAGGCTTCCCATATGGCAAAAGTCTAAGATTTGCTTCTATACAATGAATTCTGTGAGAACTAGCACTGTTGCTAGTGGAGAGTCTGAAATTGAACAGATCTCTGTCGATGAAGTTGAAATAAAACGGAAGGAGTTGTTGCCTGTTTTTGACCATTTCCATAGCATCAGACCGAGCTGGAATGAGAGAGGTTTTACTGGGGAAAGATCTTCAAGTTCTTCATCTTCAGTTTCTCATCAGGCTGAAGACAAGACAACTGCTGAAGTGACAGTTATTTGTCACTCAAAGCCAGCGTCACTCAGTTCTACTGAAAGCTCTGATGGGGGTTCATCTAGAAGAACTGAAAATTTCTTTGAACTGGATCAAGTTGCATCTAGTTGTCAGATGCTTAATGAGATCTACTTGGAACGGATGGGGGCAATCATCGTTGAGCCTTCCCTGCAGAACCATATCTTTCCAGAAAATTTATCATTTCTTTCTGGAGATTTGAAGCCTGTTGATGTGCATGCGGACCGTAGCATCCAAAGCAGTTTATCATTTCAGGGGAATAGGGTAACAGATGCTGGTGTTGGGATCAATGGCGGTTCAGTTCCAGTACCAGACCAAGATGCTCCCTCAGGGAAACTTCCGGAGGTGCCATTAATAATGCACGATACGGGAGTTGTGGGTCAGTCTTTCCAGGATGACCACTGCAAGACACTGGAGCATCATGGAAGTGACTCATTGACTGAAGTTGTAACTGATGATGTTGATGGCAGCAGTGGCCGACATGAAAGGGAGCAACCAAGGGAGGATGAAGAAGATGGGGAAATGCTTGGTGGCATATTTGCCTTTTCTGAAGAAGGCTGA 2916 0.4468 MKKGKGKNNGLLPNSLRIISSCLKTVSTNASTVASTVRSAGASVAASISSPSEDHKDQVIWAGFDRLELEQSIFKRVLLLGYVNGFQVLDVEEASSFSELVSKRDGPVSFLQMQPFPVGTDGQEGFRNSHPLLLVVAGDNSSNIQNHGHLVGNSEAQSWSVNSATAVQFYSLKSHSYVHILRFRSTVCMIRCSSRIVAVGLATQVYCFDALTLENKFSVLTYPVPRLAGQGTASVNVGYGPLAVGPRWLAYASNSPLPLNVGRLSPQNLIPSPGVSPSTSPRSGSLVACYAMESGKHLASGIIKYCQELLLDGSSSPVLSNSGWKVGRVAGMDMDNAGTVVVKDFVSRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCTRKGSGVPSYDLSSSHVHLYKLHRGITSAMIQDICFSHFSQWIAIVSSKGTCHLFVLSPFGGGTGFRIINSQGEEPSFLPVLSLPWWSTSSSISDQQSLPPPAPAVLSVVCRIKYSSFGWLNTVHSSAANVTGKVFVPSGALAAVFHNSLSHSQHQVNMKAKPLEHLLVYTPSGHVVQHKLLPSVGPEPSDSGSITQSASLMHMQDDEFRVKVEPIQWWDVCRRLEWPERGDPSGNTFDRQDGTEIVQEKTRSPDGNELDYLDINDGVGEKAVMFSTGMAQERSQWYLSNAEVQLNFGRLPIWQKSKICFYTMNSVRTSTVASGESEIEQISVDEVEIKRKELLPVFDHFHSIRPSWNERGFTGERSSSSSSSVSHQAEDKTTAEVTVICHSKPASLSSTESSDGGSSRRTENFFELDQVASSCQMLNEIYLERMGAIIVEPSLQNHIFPENLSFLSGDLKPVDVHADRSIQSSLSFQGNRVTDAGVGINGGSVPVPDQDAPSGKLPEVPLIMHDTGVVGQSFQDDHCKTLEHHGSDSLTEVVTDDVDGSSGRHEREQPREDEEDGEMLGGIFAFSEEG 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1525 971 Pfam Breast carcinoma amplified sequence 3 494 737 IPR022175 -
Lele05g1525 971 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 3 954 IPR045142 GO:0006914
Lele05g1525 971 MobiDBLite consensus disorder prediction 925 971 - -
Lele05g1525 971 SUPERFAMILY WD40 repeat-like 166 447 IPR036322 GO:0005515
Lele05g1525 971 MobiDBLite consensus disorder prediction 753 773 - -
Lele05g1525 971 MobiDBLite consensus disorder prediction 925 959 - -
Lele05g1525 971 Gene3D - 271 552 IPR015943 GO:0005515
Lele05g1525 971 SMART WD40_4 405 448 IPR001680 GO:0005515
Lele05g1525 971 SMART WD40_4 347 387 IPR001680 GO:0005515
Lele05g1525 971 Pfam WD domain, G-beta repeat 352 379 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1525 Lele-ChrLele05 9782162 9787597 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1525 05 9782162 9787597 Lele05g1525 05 9782162 9787597 ECH
Lele05g1525 05 9782162 9787597 Lele06g1376 06 8861156 8866994 ECH
Lele05g1525 05 9782162 9787597 Lele07g1584 07 9792196 9797632 hybridization