Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1376 ATGTTTCTTGTCGGTGGAGGCGGTGATGGTGCTGGCAGCGCCGCGCCTCGAGGGAAGGGGAAGAACAACGGTTTGTTGCCGAATTCATTGAGGATTATCTCTTCCTGCCTCAAGACAGTGCCTACGAATGCTAGCACCGTTGCTTCCACAGTACGCTCTGCTGGCGCCTCCGTTGCTGCTTCCATCTCCTCTCCTTCTGAGGATCACAAGGATCAGGTAACATGGGCTGGTTTTGATAGGCTGGAGCTTGACCAGTCTATCTTTAAGCGTGTTCTTTTGCTTGGTTATCTGAATGGGTTTCAAGTTCTTGACGTGGAGGATGCCTCTAGCTTCAGTGAACTGGTCTCAAAGCGAGATGGTCCCATTTCTTTCTTACAGATGCAACCTTTCCCTGTAGGCACTGATGGCCAGGAAGGATTTAGAAAATCACATCCTTTACTGCTGCTTGTTGCTGGTGACAACTCCAGCAGTAATATCCAAAACCGCACCCATTTGGGTGGTTTGGGAAGAGATAGTAATGTGGAGATTCAATCTGGGAGTGCCAGCTCTGCAACAGCTGTTCGGTTTTACTCCCTAAAGTCTCATAGTTATGTCCATATTCTGAGATTTCGGTCCACAGTCTGTATGATCAGATGCAGTTCTCGCATAGTAGCCGTTGGTCTTGCCACACAAGTATATTGCTTTGACGCATTGACTCTTGAGAATAAATTTAGCATGCTGACGTATCCTGTTCCTCAGCTAGCAGGACAAGGAATAGCAAGTGTTAATGTTGGTTATGGCCCACTGGCTGTGGGTCCAAGGTGGTTAGCATATGCTTCTAACAGTCCACTGCCCTTCAATGCAGGCCGCTTGAGCCCACAAAACCTGAGTCCTTCTCCAGGGGTTAGTCCATCAACATCTCCCGGCAGTGGTAGTTTAGTTGCTCGTTATGCAATGGAGTCTGGCAAACATCTGGCTTCTGGAATAATCAAATACTGCCAAGAGCTGCTTCCTGATGGTTCTAGTTCTCCAGTGCCTTCAAATTCAGGTTGGAAAGTTGGTAGGGTTGCAGGAATGGACATGGATAATGCAGGAACGGTTGTTGTGAAAGATTTTGTATCCAGAGCCATCATTTCACAATTTAAGGCGCACACTAGTCCTATATCTGCACTATGCTTTGACCCTAGTGGGACCCTTTTGGTCACTGCATCAGTCTATGGGAATAACATCAACATATTTCGAATAATGCCATCATGCACACGCAAGGGATCAGGTGTTCCAAGCTATGACTGGAGCTCTTCTCATGTGCATCTTTACAAACTTCATCGTGGGATAACATCAGCTATGATCCAGGACATTTGTTTCAGTCATTTTAGCCAATGGATTGCCATTGTTTCATCCAAGGGGACTTGTCATCTTTTTGTTTTGTCTCCATTTGGAGGTGGTACTGGTTTCCGAATTGTTAATTCTCAGGGTGAAGAACCCTCCTTGCTTCCAGTTTTATCACTACCTTGGTGGTCCGCGTCATATTCCATGTCTGATCAGCAATCTTTGCCTCCTCCAGCACCTGTTGTCCTTTCTGTAGTGTGCCGCATAAAATATAGCAGTTTTGGATGGCTTAATACAGTACATAGTTCTGCTGCTAATGTGACAGGAAAAGTTTTTGTCCCCTCCGGTGCTCTTGCTGCTGTCTTTCACAATTCATTATCTCACTCACAGCAGCACGTCAATATTAAGGCAAAGCCCCTTGAGCATTTGTTGGTCTACACACCATCTGGTCATGTTGTTCAACACGAACTTGTGCCTTCTGTTGGCCCAGAACCTAGTGATAGCGGTTCAATAACCCAATCTGCTTCACTCATGCACATGCAAGATGACGAGTTCAGAGTAAAAGTTGAACCTATTCAATGGTGGGATGTATGTAGAAGGTCAGAATGGCCAGAGCGAGGGGATCCTTGTGGTGATACCTTTGATAGACAAGATGGTACTGAGATAGTTCAAGAGAAAACATGTTCTCCTGATGGCAATGAATTGGATTATTTGGATATAAATGATGGTGTTGGAGAAAAGGTGGTAAAATGCTCTACTGGAAATGCCCAAGAAAGACCCCAGTGGCATCTATCTAATGCTGAGGTACAGGTAAACTTTGGAAGGCTTCCCATATGGCAAAAGTCTAAGATTTGCTTCTACACAATGAATTCTGTGAGAACTAGTACTGTTACTAGTGGAGAGGCTGAAATTGAACAGATCTCTATCAATGAAGTTGAAGTAAAACGGAAGGAGTTGTTGCCTGTATTTGACCATTTCCATAGCATCAGACCGAGCTGGAATGAGAGAGGGATTACTGGGGAAAGATCTTCAAGTTCTTCATCTTCAGTTTCTCATCAGGCAGAAGACAAGACAACTGCTGAAGTGACAGTAATTTGTCACTCAAAGCCAGCGTCACTCAGTTCTACTGAAAGCTCTGATGGGGGTTCATCTAGAACTGAAAATTTCCTTGAACTAGATCAAGTTGCATCTAGTTGTCAGGTGCTTAATGAGATATACTTGGAACGGATTGGGGCTATCATAGTTGAGCCTTCGCTGGAGAACCATATCTTGCCAGAAAATTTATCTTTCCTTTCTGGAGATTCGAAGCGTGTTGATGTGCATGCTGACCAGAGCATCCAAAGCAGTTTATTATTTCAGGGGAATAGGGTCACACCTGGAATGCAAGAAGATGCAGGTTTTGGGATTGATGACGGTTCAGCACTAGTACCAGACCAAGATGCTCCCACGGGGAAACTTCCAGAGGTGCCATCAATAATGCATGATAGAGGAGTTGTGGGTCAATCTTTCCAGGATGCCCACTGCAAGACACTGGAGCGTCATGGAAGTGACTCGTTGACTGAAGTTGTAACTGATGATGTTGATGGTAGCAGTGGCGGACTTGAAAGGGAGCAACCAAGGGAGGATGAAGAAGATGGAGAAATGCTTGGTGGCATATTTGCCTTCTCCGAAGAAGGTTGA 2988 0.4528 MFLVGGGGDGAGSAAPRGKGKNNGLLPNSLRIISSCLKTVPTNASTVASTVRSAGASVAASISSPSEDHKDQVTWAGFDRLELDQSIFKRVLLLGYLNGFQVLDVEDASSFSELVSKRDGPISFLQMQPFPVGTDGQEGFRKSHPLLLLVAGDNSSSNIQNRTHLGGLGRDSNVEIQSGSASSATAVRFYSLKSHSYVHILRFRSTVCMIRCSSRIVAVGLATQVYCFDALTLENKFSMLTYPVPQLAGQGIASVNVGYGPLAVGPRWLAYASNSPLPFNAGRLSPQNLSPSPGVSPSTSPGSGSLVARYAMESGKHLASGIIKYCQELLPDGSSSPVPSNSGWKVGRVAGMDMDNAGTVVVKDFVSRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCTRKGSGVPSYDWSSSHVHLYKLHRGITSAMIQDICFSHFSQWIAIVSSKGTCHLFVLSPFGGGTGFRIVNSQGEEPSLLPVLSLPWWSASYSMSDQQSLPPPAPVVLSVVCRIKYSSFGWLNTVHSSAANVTGKVFVPSGALAAVFHNSLSHSQQHVNIKAKPLEHLLVYTPSGHVVQHELVPSVGPEPSDSGSITQSASLMHMQDDEFRVKVEPIQWWDVCRRSEWPERGDPCGDTFDRQDGTEIVQEKTCSPDGNELDYLDINDGVGEKVVKCSTGNAQERPQWHLSNAEVQVNFGRLPIWQKSKICFYTMNSVRTSTVTSGEAEIEQISINEVEVKRKELLPVFDHFHSIRPSWNERGITGERSSSSSSSVSHQAEDKTTAEVTVICHSKPASLSSTESSDGGSSRTENFLELDQVASSCQVLNEIYLERIGAIIVEPSLENHILPENLSFLSGDSKRVDVHADQSIQSSLLFQGNRVTPGMQEDAGFGIDDGSALVPDQDAPTGKLPEVPSIMHDRGVVGQSFQDAHCKTLERHGSDSLTEVVTDDVDGSSGGLEREQPREDEEDGEMLGGIFAFSEEG 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1376 995 Pfam Breast carcinoma amplified sequence 3 514 757 IPR022175 -
Lele06g1376 995 MobiDBLite consensus disorder prediction 950 995 - -
Lele06g1376 995 MobiDBLite consensus disorder prediction 966 983 - -
Lele06g1376 995 MobiDBLite consensus disorder prediction 770 795 - -
Lele06g1376 995 SMART WD40_4 425 468 IPR001680 GO:0005515
Lele06g1376 995 SMART WD40_4 367 407 IPR001680 GO:0005515
Lele06g1376 995 Pfam WD domain, G-beta repeat 372 399 IPR001680 GO:0005515
Lele06g1376 995 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 19 978 IPR045142 GO:0006914
Lele06g1376 995 MobiDBLite consensus disorder prediction 773 794 - -
Lele06g1376 995 SUPERFAMILY WD40 repeat-like 180 467 IPR036322 GO:0005515
Lele06g1376 995 MobiDBLite consensus disorder prediction 1 22 - -
Lele06g1376 995 Gene3D - 295 493 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1376 Lele-ChrLele06 8861156 8866994 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1376 06 8861156 8866994 Lele06g1376 06 8861156 8866994 ECH
Lele05g1525 05 9782162 9787597 Lele06g1376 06 8861156 8866994 ECH
Lele06g1376 06 8861156 8866994 Lele07g1584 07 9792196 9797632 hybridization