Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1554 ATGGAAGCTACTCGCTTCAGCTCTCATGTCTTCCATCCAAGTAGCTCTTGTACTAAACCTAAGTTATTTCGAGGCAGACAAGCAGAACAAATCCAATTTTACTCTATAAAGTGCCATAAAACTGGGGTTTCTGGATTTGAAAGAAGGCAATCCCAATTGTTGAACGGATCTTTGTTTGATAGAGTAAATCGGAAGCATTATGTTAACTTCTCTGATAAGCGTCGAAGTGACTATTTGCATGTGGAAGGTCCAAATATTCAGCATTCAAGTCAGGAAATTGTTCCACCAACTCAAAGTGATGGGGCAGAGATTTTTGCATCTCCTGATCCCAATAACTTCAGAAACCTAGACCTGAGACCCAAAAAGTATAAAAATAGGTTTCTTAATTTTGTCCGCTTGAGTTCTGTCCTGAATGGAATTGCTGAATCATTTTTCAAAAGTGAGATACGGAGGAGGTTATTTGTGACTGCTGTACTAATTGTACTCAGTCGTGTTGGCTATTTTGTTCCTCTACCTGGATTTGATAGGAGGTTGATACCACAAGATTACCTGAGCTTTGTTTCAGGATCTGTTGATGAACTTGGTGACTACTCCTCTGAGCTCAAACTTTCTCTTTTCCAGCTTGGAATCAGTCCTCAGATTATAGCATCCATTATTATGCAGGTTCTTTGTCACGTGGTTCCTTCTCTGGTGAAACTGCGAAAGGAAGGTCTAGATGGACATGAGAAGATAAAGAGTTATATATGGTGGATGTCACTAGGCTTTGCAATTTTGGAAGCTCTAATACTTGCTTGCTACTCACTTCCATATTCAATTTATGCTGCCAATCAAAGGGTCAAGCATGTGATGGTGACAACTCTTTTGTTGGTGTGTGGTGCAATGACTATTACATGGATATGTGATACCATCTCAGAATCCGGCTTCGGTCAAGGTTCATCACTTATTATATGTGTGGGGATATTGACTGGTTATATGGAGACATTACACAAAATGCTGACTCAGCTCTCAGTGAGTGCTGTGAATTGGTGGCCCTACGTACTTGCAGTGTTGGGTCTATTTACAATTGTCACTATGTGGGCAGTTGTAGTTACTGAAGGTTGCAGGAAAGTGAAACTTCAGTACTATGGCTTCAAACTTGCTTCTGCTGCAAGAGAACAATCCCCAATTACTGAAGTGGAGCCCTATATTCCTTTCAACATTAATCCGTCAGGAATGCAACCTATTCTTACCACCACTTACCTCTTGGCATTTCCAAGTATTCTTGCAGGTTTGCTCGGTTCACGTTTCTGGGAGCATGTCAAGGAGATATTGAACCCCGATACATCTGCTGGTGCTGAGCCTTGGGTTTACTATTCCATCTATGCTTTGTTTGTCTTCTTATTCAATATATTTGATATTGCCAACTTGCCCAAGGAAATTGCTGATTACTTGAATAAGATGGGTGCCAGGATACCTAATATAAAGCCTGGGAAGGCTACAATAGAATACCTTTCGAAAGTTCAGGCATCCACACGATTCTGGGGGGGGCTATTGTTAAGTGTACTGGCAACCACATCAAGTATTCTTGATCATTATTTACGGCGTACGAATGCCGGATTTGCAATTGGGTTTACGTCAGTTTTGATTATTGTTGGTTCCATTATTGAGCTTAGAAGATCGTACCAAGCCTATAATGTAATGCCAGCTTTAAGCAAGGCCCTGAGACGTTTTGGTCACCATTGGAAACTCTGCTTTTCAAGCACGTCAGAGTCTAGTTTTGGGGTGACGAAGTCATCTACCAGTGTTTGCTGCCTGTTGTGCAGTAATCGCGATAGTTACTCTTTCAGAAGCCTCATTTGTGTACATCTTAGGGCGAAGAAGTTGTCTTACTGTATCCAAGAAATTTTTGTTTGCTCATTGCTATATATAGCTTAG 1914 0.4101 MEATRFSSHVFHPSSSCTKPKLFRGRQAEQIQFYSIKCHKTGVSGFERRQSQLLNGSLFDRVNRKHYVNFSDKRRSDYLHVEGPNIQHSSQEIVPPTQSDGAEIFASPDPNNFRNLDLRPKKYKNRFLNFVRLSSVLNGIAESFFKSEIRRRLFVTAVLIVLSRVGYFVPLPGFDRRLIPQDYLSFVSGSVDELGDYSSELKLSLFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDGHEKIKSYIWWMSLGFAILEALILACYSLPYSIYAANQRVKHVMVTTLLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLHKMLTQLSVSAVNWWPYVLAVLGLFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPSGMQPILTTTYLLAFPSILAGLLGSRFWEHVKEILNPDTSAGAEPWVYYSIYALFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGGLLLSVLATTSSILDHYLRRTNAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPALSKALRRFGHHWKLCFSSTSESSFGVTKSSTSVCCLLCSNRDSYSFRSLICVHLRAKKLSYCIQEIFVCSLLYIA 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1554 637 Pfam SecY 204 550 IPR002208 GO:0015031|GO:0016020
Lele07g1554 637 PRINTS Preprotein translocase SecY subunit signature 244 267 - -
Lele07g1554 637 PRINTS Preprotein translocase SecY subunit signature 403 422 - -
Lele07g1554 637 PRINTS Preprotein translocase SecY subunit signature 448 470 - -
Lele07g1554 637 PRINTS Preprotein translocase SecY subunit signature 279 304 - -
Lele07g1554 637 PRINTS Preprotein translocase SecY subunit signature 536 554 - -
Lele07g1554 637 PRINTS Preprotein translocase SecY subunit signature 305 328 - -
Lele07g1554 637 PRINTS Preprotein translocase SecY subunit signature 203 223 - -
Lele07g1554 637 PRINTS Preprotein translocase SecY subunit signature 153 171 - -
Lele07g1554 637 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 143 560 IPR002208 GO:0015031|GO:0016020
Lele07g1554 637 SUPERFAMILY Preprotein translocase SecY subunit 133 557 IPR023201 -
Lele07g1554 637 FunFam Preprotein translocase subunit SCY2, chloroplastic 137 562 - -
Lele07g1554 637 Gene3D SecY subunit domain 136 562 IPR023201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1554 Lele-ChrLele07 9577754 9584319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1554 37 571 Miscellaneous Gene Families AT2G31530 72.862 0.0 801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1554 07 9577754 9584319 Lele07g1554 07 9577754 9584319 ECH
Lele05g1493 05 9563809 9569984 Lele07g1554 07 9577754 9584319 hybridization
Lele06g1349 06 8634238 8643938 Lele07g1554 07 9577754 9584319 hybridization