Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1527 ATGCTAACAGCGTCCCTTATGGTGGCTCTTTGGGGATTCACGGTGGCTCAGAATGATTCTAGCTGCACCAACGTGCTCATAAGTCTGTCTCCTTGCTTAGACTATGTAACAGGAAACGCCTCTGTTCCTTCTTCTGCTTGTTGCACCCAACTCGCCTCCGTGGTGAGTTCACAGCCACAGTGCCTTTGCCAGGTCGTCAATGGCGCCGCCTCCTCGTCGGCGGGTATCAACATCAATCAGACTCAGGCTTTGACACTCCCTAGCGCCTGCAGAGTCCAGACACCTCCTCTTAGCATCTGTCAAGCTTCTTCTCCTACGAGTGATTCTTCTGCTACTGTAACGACAAGTTTCCCTTCAGGAAATGGGTATAGTACTTTTTCACCAACTAGGGGAAGTGGCACAAGCTCGTCCCATGGGAATTCCTTTAAACAGCCATCTTCTTCTCTGCTTGGCTTATTTATCTTTGTGACATGTGAACGCGGGGCAAGGTCAAGAATTGCAATTCTGGGGTTTCCGTCGGTTTCTGGCACCCGGACATTTTTAGGAAACCTTGGTTCACTGATTTTGGATCAAGAATCAAGACTGGGATCTGATTTTTATTCTGTTGATTTCTTTTCTTTTCTTTGGATGTATCTTGTTCTTCAACTCTATGATTTTTTTTTTCAGTTTCTCTGTGACTGTGCTTTTTCTATTTTACCACAATCGTGTGCTAGAGGATTGACAGGCACGGATGCAATAGTGATTATCATGTCTGGATTGATTGAAGGACTTCCTGATGCAGTTGCAATAAGGTGCCTTGCGAGGGTTCCCTTTTACCTCCACCCAAAATTAGAGCTTGTTTCTCGCTCTTGGCGAGCAGCCATTCATAGCGTTGAACTATTTAAAGCGCGACAGGAGGTTGGCTCATCTGAGGATCTGTTATGTGTATGTGCTTTTGATCCAGAGAACCTATGGCAGCTGTATGACTCTTTGCGGGATCTTTGGATTACACTTCCTGTTCTTCCCTCAAAAGTCAGACACCTTGCCCGCTTTGGTGCCGTCTCCACTGCTGGAAAGTTGTTTGTGATTGGTGGCGGAAGTGATGCTGTAGATCCGTTGACTGGTGATCAAGATGGGAGCTTTGCAACGAATGAAGTCTGGTCATATGACCCCGTAGTCCGGCAGTGGGCCACACGGGCTTCAATGCTTGTCCCTCGTTCTATGTTCGCATGCTGTGTTTTGAATGGAAAAATAATTGTGGCCGGGGGCTTCACTAGCTACAGAAAATCAGTATCTCAAGCAGAAATGTACGACCCTGAAAGAGATGTGTGGGTTGAAATGTCTAATCTTCATTGCGTCCATAATTCAGCCTGTTCAGGAGTAGTTATTGGAGGAAAGGTACACGTATTGCATAAAGGGTTGTCAACAGTGCAAGTTTTAGACAATGGAGGGGCTCCTGGGTGGACCGTTCAGGAAAGCGGGTGGCTCCAAGGTCCGATGGCAGTTGTTGGAGGCGCCCTTTATGTGATGAGCCATAGATTTATTATCAAGCAGGACAAAGGAGAGAGAAAGATAGTGGGTTTAGCAAATGAGTTTCAAAGTAGAATCGGGTTTGGAATGATTGGGGTTGGTGATGATCTATATGTAGTAGGAGGCGTGGTTGGCCCTGGCGGTTTGAACTGGAACATTAAGCCTTTGGCTAATGTTGATATTCTCACACCACTTGGGAGCGACAGAACAACCTGGCGTCAGGCGTCTCCAATGTCACGGTGTCGTGGTACTATCCTTGGTTGTACATTGCTGAGAATTTAG 1791 0.4679 MLTASLMVALWGFTVAQNDSSCTNVLISLSPCLDYVTGNASVPSSACCTQLASVVSSQPQCLCQVVNGAASSSAGININQTQALTLPSACRVQTPPLSICQASSPTSDSSATVTTSFPSGNGYSTFSPTRGSGTSSSHGNSFKQPSSSLLGLFIFVTCERGARSRIAILGFPSVSGTRTFLGNLGSLILDQESRLGSDFYSVDFFSFLWMYLVLQLYDFFFQFLCDCAFSILPQSCARGLTGTDAIVIIMSGLIEGLPDAVAIRCLARVPFYLHPKLELVSRSWRAAIHSVELFKARQEVGSSEDLLCVCAFDPENLWQLYDSLRDLWITLPVLPSKVRHLARFGAVSTAGKLFVIGGGSDAVDPLTGDQDGSFATNEVWSYDPVVRQWATRASMLVPRSMFACCVLNGKIIVAGGFTSYRKSVSQAEMYDPERDVWVEMSNLHCVHNSACSGVVIGGKVHVLHKGLSTVQVLDNGGAPGWTVQESGWLQGPMAVVGGALYVMSHRFIIKQDKGERKIVGLANEFQSRIGFGMIGVGDDLYVVGGVVGPGGLNWNIKPLANVDILTPLGSDRTTWRQASPMSRCRGTILGCTLLRI 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1527 596 CDD AAI_LTSS 29 92 - -
Lele07g1527 596 SMART fbox_2 257 297 IPR001810 GO:0005515
Lele07g1527 596 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 21 101 IPR036312 -
Lele07g1527 596 Gene3D - 313 594 IPR015915 GO:0005515
Lele07g1527 596 PANTHER OS02G0202900 PROTEIN 251 592 IPR045887 -
Lele07g1527 596 Pfam Kelch motif 342 395 IPR006652 GO:0005515
Lele07g1527 596 Pfam Kelch motif 398 443 IPR006652 GO:0005515
Lele07g1527 596 PRINTS Plant phospholipid transfer protein signature 77 94 IPR000528 GO:0006869|GO:0008289
Lele07g1527 596 PRINTS Plant phospholipid transfer protein signature 21 37 IPR000528 GO:0006869|GO:0008289
Lele07g1527 596 PRINTS Plant phospholipid transfer protein signature 42 56 IPR000528 GO:0006869|GO:0008289
Lele07g1527 596 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 19 99 - -
Lele07g1527 596 Pfam Probable lipid transfer 16 100 IPR016140 -
Lele07g1527 596 SMART kelc_smart 410 457 IPR006652 GO:0005515
Lele07g1527 596 SMART kelc_smart 539 595 IPR006652 GO:0005515
Lele07g1527 596 SMART kelc_smart 352 409 IPR006652 GO:0005515
Lele07g1527 596 SMART aai_6 22 100 IPR016140 -
Lele07g1527 596 Gene3D - 19 97 IPR036312 -
Lele07g1527 596 SUPERFAMILY Kelch motif 310 546 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1527 Lele-ChrLele07 9404381 9409082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1527 5 143 Lipid Metabolism Gene Families AT3G22600 50.350 1.39e-34 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1527 07 9404381 9409082 Lele07g1527 07 9404381 9409082 ECH
Lele05g1466 05 9412286 9414388 Lele07g1527 07 9404381 9409082 hybridization
Lele06g1322 06 8469212 8477826 Lele07g1527 07 9404381 9409082 hybridization