Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1525 ATGAAATCAGTTCGTTGCTCCGCAAAGTGCATGCAGTTTTGCTTTCGCTCAAATTTTCCCTCTACCTTTTCTGGTGATTTAGAGGGCCGTCCTGATATGGGCTGGAAAGCAGCGGCGAAACTAATTAGGCACTGGAAGATTCTTAGTGGGGACACTGTAATGATTATAAGGGCCAAGGATAGAGGCAAGATAGGGATTATTAAGCGCATGATTCACTCTCGGAATCGTGTAATTGTTGGGGCCAAAAATCCGAATGAATTCAACCATCGGGGTCTATATTTCTCAAGTATGGCTGAAACAATCCTGGTCCAGGCTCGAGACCCTGCTAAACTGAATATGGAAATAGAAAATGCTATCAATGAGAATAAATTAGATGATACATGGAAGCTATTTGAGCAGCATATGCAAATAGATGGCTTTCCGAGAAAATTTATTGTCAACAAGCTTCTAACCACTTTTGTAGAAAGCCTTGATGTGCATTGGCTAGAAAAAGCTTATGGGTTGGTAGATAAGGCTGTTGAGGAAGGTAAACAGAACTTGTTTGAGAAGGAAGTACTTTTGTATCTCTGCTTTGGTCTTGCCAAAGCTGGACTACCAGTTCCTGCATCAACTGTCTTAAGAATGATGATAAATATGGAGCAGTTTCCCCCAGTCGCTGCATGGTCTGCAGTTTTGGCCCACATGTCACAAACAGCAGATGGAAGTTATCTTGCTGCTGAGTTGATTCTTGAAATAAGTTATTTGTTCCAGAACAATAGAGTGGATCCACGCAAAAAGAGCAATTCACCTTTGGTAGCTATGAAGCCTGATACTACTGCTTTTAACATTGCTTTGGCAGGGTGTCTCCTATTTGAGACTACTAGGAAAGCAGAGCAGCTTCTAGATTTGATGCCTCGAATTGGTGTCAAGGCTGATGCAAACTTACTAATAATAATGGCACATGTGTATGAGAAGAATGGGCGAAGAGAAGAGCTTAAGAAGTTGCGAAGGCATATAGAGGAAGCACCCAATCTTACTGATTTTCAGTTCCGCCAATTCTTTAATTGTTTGCTCTCATGCCATTTGAAATTTGGGGATCTAGATTCAACATCAAACATGGTCCTGGAAATGCTAAGGAAATCAAAGGAGACAAAAAATTCTCTTGCAGCTGCTAAATTTATAAGTGATGCAACTGAAGTTAGTCATAAATATTCTCCTGGACTTGATTCTATGACAAGTTTGAGTGATGGTAAGTATTCAGACTGTTTAGAATATGACAAACCAATGAGAAACACCATCCTATCTTATGAAGAGTTCTCTGGAGATTGGAATTTCTTAAAAATTGAAGCGGAGTCAAAGGCTGTTCTTGGTTCTCTGTTAGCCAAGTTGCAGACACAGTTTGACTTGATTACAACAAAGCATGGTATACTCCAACCAACTGAATCAATTTATGTGAAACTGGTTAAAGCTTTTCTAGAAGTTGGCAAGACCAAGGATTTGGCAGAGTTTCTAATTAAGGCTGAAAGAGAAGATTCCCCACTTTCCAATGATAGCTCAATATTGGTCCATGTCATTAATTCATGTATTTCACTCGGACGGTTGGATCAAGCACATGACCTTCTTGATGAGATGCGGATAGCTGGAATTAAAACTGGCTCATCTGTGTATACCTCTCTCTTGAAAGCCTATTGTCTAGCAAATAAGGCTGCAGAAGTCACTTCACTTTTAAGAGATGCAAGGAAGGATGGTATCCAGCTGGACTCTAGTTCTTATGAGGCGATGATCCAATCCAGGGTGCTTCAGGAGGATACAAAGGGAGCACTCCGTTTATTCAAAGAGATGAAAGTGGCTAAAATTCCAAAAGTTGGACAGCAAGACTCTATTGTGCAAGCTAAAAGTCATGTACAGAAAGATGAATCTGGTTTGATGATGAATCTGTTGCAGGAAATCAAAGAAGGACAGAAAGTGAATTATGAGGTTCATGACTGGAATAATGTAATCCATTTTTTCTGTAAGAAGAGACTGATGAAAGATGCTGAAAAGGCTCTGAAGAAGATGAGGAGCCTAGGCCACACGCCAAATGCTCAAACTTTCCATTCTATGGTCACTGGGTATGCTGCTGTTGGAGGGAACTATCTGGAGGTAACAGAGCTCTGGGGTGAGATGAAAGCTCTTGCATCTTCAGTCTCAATGAAGTTTGATCAGGAGCTTCTTGATTCAGTGCTGTATACATTTGTGAGGGGTGGATTCTTCAGTCGAGCCAATGAAGTTGTGGCAATGATGGAAAAAGCTGACATGTTTATTGACAAGTACAAGTATCGAATGCTTTTCCTGAAGTATCATAAAACATTATATAAAGGCAAGGCTCCGAAGTTTCAGACAGTAGCCCAGTTAAACAAGAGGGAAGCAGCCCTGGCTTTTAAAAAATGGGCAGTTAAAATTTGGTATAACAGAAAGCAAGGACAAGCTGGCCATACATATACTTCCTTGAATATTGTTTTGAGTCTAGAGAAGAATTGGGATTCCTTGCATGGCCCAAGTCCCGGCACATGCAAACACCAGCAGCAGTACAGTGAGAGTGACAAGCGGAAATGTATTGGAAGATGTGAGAGGAATCATGAGAAGAAGAAGGAGCGAGAGAGGGAAATAGAAGAGCGAATCCGGAGAAGGAAAGAGCATGAGATGAAAGAAAAGGAAGGCCAACAAGAAGAAGAAGAAGGGTATGAGGAGGAGCAAGAGGGAAATCCTTTCGTTTTCGGCGATGAACAGTTTGAGAGCAGAGTCGAGACAGAAGATGGCAGTGTTCGGGTTCTCCAGAGGTTTACAGGAAGATCTAAGCTTCTTCGGGGCATTGAGAATTTTCGTTTGTCTATTTTAGAAGCTCAACAACATAGTTTTGTCTCTCCATGTCATTTCGATTCTGAGCTCATTATCTTCACCGTCAAAGGGCGAGCGACCATCGGGTTGGTGAATGGAGACAAAACAGAAAGATTCAATCTTGAACCAGGAGACATCATGAGGATACCATCGGGTACTCCATTTTACATTGTCAACAGGGATGAATATGAGAAGCTCCTTCTTGCCAAGCTCCATATCACTGTCTCCATCCCAGGACATTACGAGGCATTTTATGGACCTGGCGGCCGAGACCCAGAATCAGTTTTGGAAGCATTCAGCTGGGACGCAGAAGAAGGGAAGCATTTTCAAAATATCGAGAGATCAAGTGAAGTCGCTGAGCAAGGGCTGGGACCTGTGGCCGTTGGGAGGGCAATATGGAGGGGTCCATTCAATCTCTTCCGGAACGAACCCTCTGTTTCCAACGACTACGGTCGTCTCTATGAAGTGGGTCCTCAAGACAAGAAGAGCAACCATGCTAACATCACCAACGGATCTAGGTCGGCTCCTCTGTACAACTCAAAGGCAATCAAGATAGGTATGTTAAGTGAAGGCGAAGGAAAATTTGAGATGGTGTCCGTGACTCAACATATGTCACGAGGACACCAGAAGAAGAGCAGCCCAACATACGAGAGGGTGAGTGGCTGGTTAAGGCCTGGAGTTGTGTTCGTGGTGCCAGCAGGGCATCCATATGTGGCCATGGCTTCCAGGGAAAGCAACCTTCAAATACTGTGCTTTGAGGTTCATGCAGGAGGGAACACAAAGCTCACTTTTGCAGGGAAGAGGAACGTAGTGAAAGCGTTGGACAAACAGGCGAAAGAGCTGGCATTCAACTGGCCGGCGGAGAAGGTGGACGATATATTCAGCAGAGAAGAGGATTTCTTTTTCCCCGGGCCTTTTCGAGGAGGAGGAAGAGCGTCCTCGTCGTGCGGACACGAAAGTGATGACTATATATGTATTGTCTCAGAAGCTTTGACGCCTTCCAAGGCCATGCCATTGGAGCTTTCATCATCACCACTTTGTTCTACTTTCGTGCGTGCGTGCGTCAATATTGTCAGATCCCTCTCTGCAAAATGCATCTGTCTCTCTTCTGTGCATTCTTCAGCATCGCCATCATAG 3993 0.4338 MKSVRCSAKCMQFCFRSNFPSTFSGDLEGRPDMGWKAAAKLIRHWKILSGDTVMIIRAKDRGKIGIIKRMIHSRNRVIVGAKNPNEFNHRGLYFSSMAETILVQARDPAKLNMEIENAINENKLDDTWKLFEQHMQIDGFPRKFIVNKLLTTFVESLDVHWLEKAYGLVDKAVEEGKQNLFEKEVLLYLCFGLAKAGLPVPASTVLRMMINMEQFPPVAAWSAVLAHMSQTADGSYLAAELILEISYLFQNNRVDPRKKSNSPLVAMKPDTTAFNIALAGCLLFETTRKAEQLLDLMPRIGVKADANLLIIMAHVYEKNGRREELKKLRRHIEEAPNLTDFQFRQFFNCLLSCHLKFGDLDSTSNMVLEMLRKSKETKNSLAAAKFISDATEVSHKYSPGLDSMTSLSDGKYSDCLEYDKPMRNTILSYEEFSGDWNFLKIEAESKAVLGSLLAKLQTQFDLITTKHGILQPTESIYVKLVKAFLEVGKTKDLAEFLIKAEREDSPLSNDSSILVHVINSCISLGRLDQAHDLLDEMRIAGIKTGSSVYTSLLKAYCLANKAAEVTSLLRDARKDGIQLDSSSYEAMIQSRVLQEDTKGALRLFKEMKVAKIPKVGQQDSIVQAKSHVQKDESGLMMNLLQEIKEGQKVNYEVHDWNNVIHFFCKKRLMKDAEKALKKMRSLGHTPNAQTFHSMVTGYAAVGGNYLEVTELWGEMKALASSVSMKFDQELLDSVLYTFVRGGFFSRANEVVAMMEKADMFIDKYKYRMLFLKYHKTLYKGKAPKFQTVAQLNKREAALAFKKWAVKIWYNRKQGQAGHTYTSLNIVLSLEKNWDSLHGPSPGTCKHQQQYSESDKRKCIGRCERNHEKKKEREREIEERIRRRKEHEMKEKEGQQEEEEGYEEEQEGNPFVFGDEQFESRVETEDGSVRVLQRFTGRSKLLRGIENFRLSILEAQQHSFVSPCHFDSELIIFTVKGRATIGLVNGDKTERFNLEPGDIMRIPSGTPFYIVNRDEYEKLLLAKLHITVSIPGHYEAFYGPGGRDPESVLEAFSWDAEEGKHFQNIERSSEVAEQGLGPVAVGRAIWRGPFNLFRNEPSVSNDYGRLYEVGPQDKKSNHANITNGSRSAPLYNSKAIKIGMLSEGEGKFEMVSVTQHMSRGHQKKSSPTYERVSGWLRPGVVFVVPAGHPYVAMASRESNLQILCFEVHAGGNTKLTFAGKRNVVKALDKQAKELAFNWPAEKVDDIFSREEDFFFPGPFRGGGRASSSCGHESDDYICIVSEALTPSKAMPLELSSSPLCSTFVRACVNIVRSLSAKCICLSSVHSSASPS 1330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1525 1330 SUPERFAMILY RmlC-like cupins 1086 1261 IPR011051 -
Lele07g1525 1330 CDD cupin_7S_vicilin-like_N 920 1054 - -
Lele07g1525 1330 SUPERFAMILY RmlC-like cupins 908 1055 IPR011051 -
Lele07g1525 1330 Gene3D Tetratricopeptide repeat domain 445 617 IPR011990 GO:0005515
Lele07g1525 1330 Gene3D Jelly Rolls 1084 1258 IPR014710 -
Lele07g1525 1330 Coils Coil 859 904 - -
Lele07g1525 1330 Pfam PPR repeat family 655 699 IPR002885 -
Lele07g1525 1330 SMART kow_9 46 73 IPR005824 -
Lele07g1525 1330 Gene3D Jelly Rolls 904 1075 IPR014710 -
Lele07g1525 1330 Gene3D Tetratricopeptide repeat domain 108 444 IPR011990 GO:0005515
Lele07g1525 1330 Pfam Pentatricopeptide repeat domain 567 612 IPR002885 -
Lele07g1525 1330 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 545 579 IPR002885 -
Lele07g1525 1330 Gene3D - 42 90 IPR014722 -
Lele07g1525 1330 CDD KOW_RPL26 50 79 IPR041988 GO:0003723
Lele07g1525 1330 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 510 544 IPR002885 -
Lele07g1525 1330 SUPERFAMILY Translation proteins SH3-like domain 42 83 IPR008991 -
Lele07g1525 1330 SMART Cupin_1_3 1089 1243 IPR006045 -
Lele07g1525 1330 Gene3D Tetratricopeptide repeat domain 619 841 IPR011990 GO:0005515
Lele07g1525 1330 MobiDBLite consensus disorder prediction 884 908 - -
Lele07g1525 1330 PANTHER BNAC05G43320D PROTEIN 93 805 - -
Lele07g1525 1330 Pfam Cupin 1089 1240 IPR006045 -
Lele07g1525 1330 Pfam Cupin 955 1017 IPR006045 -
Lele07g1525 1330 CDD cupin_7S_vicilin-like_C 1096 1251 - -
Lele07g1525 1330 Pfam PPR repeat 517 542 IPR002885 -
Lele07g1525 1330 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 652 686 IPR002885 -
Lele07g1525 1330 TIGRFAM PPR: pentatricopeptide repeat domain 656 688 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1525 Lele-ChrLele07 9390592 9400344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1525 908 1242 Miscellaneous Gene Families AT2G18540 21.842 1.18e-14 77.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1525 07 9390592 9400344 Lele07g1525 07 9390592 9400344 ECH
Lele05g1463 05 9395538 9404989 Lele07g1525 07 9390592 9400344 hybridization
Lele06g1321 06 8463895 8467626 Lele07g1525 07 9390592 9400344 hybridization