Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1463 ATGTTGAAAAACCCTCCAAATCATTCCCGGCTGAGCCAACCGATCACTGATCCTGATTCTTCACTCTACCGGAAACGTGTCACTGATTATAGGCTTTACTACGGCTCCAGCCAGTCCGAGCTTAGCTCTCCGTTTGCAGCTCCTTTTTATTTCACTTTATACCCAACTGTTTTAGCAATTGGCTTTTCAGGCTCAAATTTTCTCTCTACCTTTTCTGGTGATTTAGAGGGCCGTCCTGATATGGGCTGGAAGGCTGCTGCGAAACTAATTAGGCCCTGGAAGATTCTCAGAGGGGACACTGTAATGATTATAAGGGGCAAGGATGGAGGCAAGATAGGGATTATTAAGCGCATGATTCACTCTCGGATTCGTGTAATTGTTGGGGCCAAAAATCCGAATGAATTCAACCATCGGGGTCTATATTTCTCAAGTATGGCTGAAACAATCCTGGTCCAGGCTCGAGACCCTGCTAAACTGAATATGGAAATAGAAAATGCTATCAATGAGAATAAATTAGATGATACATGGGAGCTATTTGAGAAACATATGCAAATAGATGGCTTTCCTAGAAAATTTATTGTCAACAAGCTTCTAACCACTTTTGTCGAAAGCCTTGATGTGCAATGGCTAGAAAAAGCTTATGGGCTAGTAGAAAAGGCTGTTGAGGAAGGTAAACAGAATTTGTTAGAGAAGGAAGTACTTGTGTATCTCTGCTTTGGTCTTGCCAAAGCTGGACTACCAGTTCCTGCATCAACTGTCTTAAGAATGATGATAAATATGGAGCAATTTCCCCCAGTAGCTGCATGGTCTGCAGTTTTGGCCCACATGTCACAAACAGCAGATGGAAGTTATCTTGCTGCTGAGTTGATTCTTGAAATAAGTTATTTGTTCCAGAACAATAGAGTGGATCCACGCAAAAAGAGCAATTCACCGTTGGTGGCTATGAAGCCTGATACTACTGCTTTTAACATTGCTTTGGCAGGGTGTCTCCTATTTGAGACTACTAGGAAAGCAGAGCAGCTTCTAGATTTGATGCCTCGAATTGGTGTCAAGGCTGATGCAAACTTACTAATAATAATGGCACATGTATATGAGAAGAATGGGCGAAGAGAAGAGCTTAAGAAGCTGCGAAGGCATATAGAGGAAGCACTGAATCTTACTGATTTTCAGTTCCGCCAATTCTTTAATTGTTTGCTCTCGTGCCATTTGAAATTTGGGGATCTAGATTCAGCATCAAACATGGTCCTGGAAATGCTAAGGAAATCAAAGGAGGCAAAAACTTCTCTTGCAGCTGCTAAATTTATAAGTGATGCAACCGAAGTTAGTCATAAATATTCTCCTGGACTTGATTCTATGCCAAGTTTGAGTGATGGGAAGGAATCAGACTGTTTAGAATATGACAAACCAATGAGAAACACCATCCTATCTTATGAAGAGTTCTCTGGAGATTGGAATTTCTTAAAAATTGAAGCAGAGTCAAAGGCAGTTCTTGGTTCTCTGTTAGCCAAGTTGCAGACACAGGTTGACTTGATTACAACGAAGCATGGTATACTCCAACCAACTGAATCAATTTATGTGAAACTGGTTAAAGCTTTTCTAGAAGTTGGCAAGACCAAGGATTTGGCAGAGTTTCTAATTAAGGCAGAAAGAGAAGATTCCCCACTTTCCAATGATAGCTCAATATTGGTTCATGTCATTAATTCATGTATTTCACTCGGACGGTTGGATCAAGCACATGACCTTCTTGATGAGATGCGAATAGCTGGAATTAAAACAGGCTCATCTGTGTATATCTCTCTCTTGAAAGCCTATTGTCAAGCAAATAAGGCTGCAGAAGTCACTTCACTTTTAAGAGATGCAAGGAAGGATGGTATCCAGCTGGACTCTAGTTCTTATGAGGCGATGATCCAATCCAGGGTGCTTCAGGAGGATACAAAGGGAGCGCTCCGTTTATTCAAAGAGATGAAAGTGGCTAAAATTCCAAAAGTTGGACAGCAAGACTCTATCGTGCAAGCTAAAAGTCATGTACAGAAAGATGAATCTGGTTTGATGATGAATCTGTTGCAGGAAATCGAAGAAGGACAGAAAGTGAATTATGAGGTTCATGACTGGAATAATGTAATCCATTTTTTCTGTAAGAAGAGACTGATGAAAGATGCTGAAAAGGCTCTGAAGAAGATGAGGAGCCTAGGCCACACGCCAAATGCACAAACTTTCCATTCTATGGTCATTGGGTATGCTGCTGTTGGAGGGAACTATCTGGAGGTAACAGAGCTCTGGGGTGAGATGAAAGCTCTTGCTTCTTCAGTCTCAATGAAGTATGATCAGGAGCTTCTTGATTCAGTGCTGTATACATTTGTGAGGGGTGGATTCTTCAGTCGAGCCAATGAAGTTGTGGCAATGATGGAAAAAGCTGACATGTTTATTGACAAGTACAAGTATCGAATGCTTTTCCTGAAGTATCATAAAACATTATATAAAGGCAAGGCTCCGAAGTTTCAGACAGTAGCCCAGTTAAACAAGAGGGAAGCAGCCCTGGCTTTTAAAAAATGGGACACGTTACCTGACATTTGTCCTCGTGCATGTCCTTCATTCCATCATTTTGAGAGCAGAGTCGAGACAGAAGATGACAGCGTTCGGGTTCTCCAGAAGTTTACAGGAAGATCTAAGCTTCTTCGGGGCATTGAGAATTTTCATTTGTCTATTTTAGAAGCTCAACAACATAATTTTGTTTCTCCATGTCACTTCGATTCTGAGCTCATTATCTTCACCGTCAAAGGGCGAGCTACCATCGGGTTGGTGAATGGAGACAAAACAGAAAGATTCAATCTTGAACCAGGAGACATCATGAGGATACCATCGGGTACTCCATTTTACTTTGTCAACAGGGATGAAGATGAGAAGCTCCTTCTTGCCAAGCTCCATATCACTGTCTCCATCCCAGGACATTGCGAGGCATTTTATGGGCCTGGCGGGCGAGACCCAGAATCAGTTTTGGAAGCATTCAGCTGGGACCTACTTGAAGCTTCATTAAAGAGGCAGAAGGGGAACCTGGAGAGGCTGTTTGGAAGGCAGAAGAAGGGAAGCATTTTCAAAATATCGAGAGATCAAGTGAAGTCGCTGAGCAAGGGCTGGGACCTGTGGCAATTCGGAGGGCAATGGAGGGGTCCATTCAATCTCTTCCGGAACAAACCCTCTGTTTCCAACGACTACGGCCGTCTCTATGAAGTGGGTCCTCAAGACAAGAAGATCAACCTTGGAAACCTCAATCTCATGATCACCTTCGCTAACATCAGCAACGGATCTATGTCGGCTCCTCTGTACAACTCAAAGGCAATCAAGATAGGGCGAAGCAAGTTCCAGCGAGGACACCAGAAGAAGAGCAGCCCAACATACGAGAGGGTGAGTGGCTGGTTAAGGCCTGAAGTTGTGTTCGTGGTGCCAGCAGGGCATACGTATGTGGCCATGGCTTCCAGGGAAAGCAACCTTCAAATTCTGTGCTTTGACGTTCATGCAGGAGGGAACACAAAGCTCACTTTTGCAGGGAAGAGGAACATAGAGAAAGCGTTGGACAAGCAGGCGAAAGAGCTGGCATTTAACTGGCCGGCGGAGAAGGTGGACGATATATTCAGCAGAGAAGAGTATTTCTTTTTCCCTGGGCCTCAGAGTTTCGAGGAGGAGGAAGAGCGTCCTCGTCGCGCCGACGCTTAA 3711 0.4355 MLKNPPNHSRLSQPITDPDSSLYRKRVTDYRLYYGSSQSELSSPFAAPFYFTLYPTVLAIGFSGSNFLSTFSGDLEGRPDMGWKAAAKLIRPWKILRGDTVMIIRGKDGGKIGIIKRMIHSRIRVIVGAKNPNEFNHRGLYFSSMAETILVQARDPAKLNMEIENAINENKLDDTWELFEKHMQIDGFPRKFIVNKLLTTFVESLDVQWLEKAYGLVEKAVEEGKQNLLEKEVLVYLCFGLAKAGLPVPASTVLRMMINMEQFPPVAAWSAVLAHMSQTADGSYLAAELILEISYLFQNNRVDPRKKSNSPLVAMKPDTTAFNIALAGCLLFETTRKAEQLLDLMPRIGVKADANLLIIMAHVYEKNGRREELKKLRRHIEEALNLTDFQFRQFFNCLLSCHLKFGDLDSASNMVLEMLRKSKEAKTSLAAAKFISDATEVSHKYSPGLDSMPSLSDGKESDCLEYDKPMRNTILSYEEFSGDWNFLKIEAESKAVLGSLLAKLQTQVDLITTKHGILQPTESIYVKLVKAFLEVGKTKDLAEFLIKAEREDSPLSNDSSILVHVINSCISLGRLDQAHDLLDEMRIAGIKTGSSVYISLLKAYCQANKAAEVTSLLRDARKDGIQLDSSSYEAMIQSRVLQEDTKGALRLFKEMKVAKIPKVGQQDSIVQAKSHVQKDESGLMMNLLQEIEEGQKVNYEVHDWNNVIHFFCKKRLMKDAEKALKKMRSLGHTPNAQTFHSMVIGYAAVGGNYLEVTELWGEMKALASSVSMKYDQELLDSVLYTFVRGGFFSRANEVVAMMEKADMFIDKYKYRMLFLKYHKTLYKGKAPKFQTVAQLNKREAALAFKKWDTLPDICPRACPSFHHFESRVETEDDSVRVLQKFTGRSKLLRGIENFHLSILEAQQHNFVSPCHFDSELIIFTVKGRATIGLVNGDKTERFNLEPGDIMRIPSGTPFYFVNRDEDEKLLLAKLHITVSIPGHCEAFYGPGGRDPESVLEAFSWDLLEASLKRQKGNLERLFGRQKKGSIFKISRDQVKSLSKGWDLWQFGGQWRGPFNLFRNKPSVSNDYGRLYEVGPQDKKINLGNLNLMITFANISNGSMSAPLYNSKAIKIGRSKFQRGHQKKSSPTYERVSGWLRPEVVFVVPAGHTYVAMASRESNLQILCFDVHAGGNTKLTFAGKRNIEKALDKQAKELAFNWPAEKVDDIFSREEYFFFPGPQSFEEEEERPRRADA 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1463 1236 Gene3D Jelly Rolls 862 1042 IPR014710 -
Lele05g1463 1236 Gene3D Tetratricopeptide repeat domain 514 668 IPR011990 GO:0005515
Lele05g1463 1236 Pfam PPR repeat 565 590 IPR002885 -
Lele05g1463 1236 Pfam PPR repeat 395 421 IPR002885 -
Lele05g1463 1236 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 558 592 IPR002885 -
Lele05g1463 1236 SMART kow_9 94 121 IPR005824 -
Lele05g1463 1236 MobiDBLite consensus disorder prediction 1 20 - -
Lele05g1463 1236 Coils Coil 366 386 - -
Lele05g1463 1236 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 700 734 IPR002885 -
Lele05g1463 1236 MobiDBLite consensus disorder prediction 1 19 - -
Lele05g1463 1236 Gene3D Tetratricopeptide repeat domain 156 493 IPR011990 GO:0005515
Lele05g1463 1236 Pfam PPR repeat family 703 747 IPR002885 -
Lele05g1463 1236 CDD KOW_RPL26 98 127 IPR041988 GO:0003723
Lele05g1463 1236 TIGRFAM PPR: pentatricopeptide repeat domain 704 736 IPR002885 -
Lele05g1463 1236 Pfam Pentatricopeptide repeat domain 615 660 IPR002885 -
Lele05g1463 1236 CDD cupin_7S_vicilin-like_C 1065 1214 - -
Lele05g1463 1236 CDD cupin_7S_vicilin-like_N 871 1044 - -
Lele05g1463 1236 Gene3D Tetratricopeptide repeat domain 669 847 IPR011990 GO:0005515
Lele05g1463 1236 SUPERFAMILY Translation proteins SH3-like domain 90 131 IPR008991 -
Lele05g1463 1236 Pfam Cupin 908 969 IPR006045 -
Lele05g1463 1236 Pfam Cupin 1058 1204 IPR006045 -
Lele05g1463 1236 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 593 627 IPR002885 -
Lele05g1463 1236 Gene3D - 91 139 IPR014722 -
Lele05g1463 1236 SUPERFAMILY RmlC-like cupins 1043 1213 IPR011051 -
Lele05g1463 1236 SMART Cupin_1_3 1058 1207 IPR006045 -
Lele05g1463 1236 Gene3D Jelly Rolls 1118 1221 IPR014710 -
Lele05g1463 1236 PANTHER BNAC05G43320D PROTEIN 141 854 - -
Lele05g1463 1236 Gene3D - 1056 1117 - -
Lele05g1463 1236 SUPERFAMILY RmlC-like cupins 868 1041 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1463 Lele-ChrLele05 9395538 9404989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1463 520 779 Miscellaneous Gene Families AT4G11690 26.236 1.02e-15 80.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1463 05 9395538 9404989 Lele05g1463 05 9395538 9404989 ECH
Lele05g1463 05 9395538 9404989 Lele07g1525 07 9390592 9400344 hybridization
Lele05g1463 05 9395538 9404989 Lele08g1315 08 8401956 8406640 hybridization