Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1395 ATGGGTTTGATTGGAAAACCTTGCTCTCTCCGCTCCGTGTTTCTCTTCTCTGTTTTCGCGCTCCTTCTTCAGCGTATTTCAGCTGCGGATTTCACTGACTTGGTTTACAAGGGCTGTACGGATCAGAAATTTCAAGACCCGTCGGGGATTTACTCGCAGAACCTCAGGTCTTTACTGGTTACTCTCGTCGCACAATCTGCACAAAAGGTTTTCGCCTCTACAACCTCCGGAGACGGCCAGAATGCGATCATGGGTCTGTACCAATGCAGAGGAGACCTCTCAAACTCCGACTGCTACAAATGTGTTAGCAAGATTCCCAATATGCTCGACAAGCTTTGTGGCCAGGTTGTGGCGGCGCGTGTCCAGCTCAATGGGTGCTATTTGCGGTACGAGATCGTCGGGTTCAAGCAAGTCTCCGGGACTCAGTTGCTGTACAAGGTCTGTGGGTCGATTCAGGCGAGCGGAAGTGGGTTTGCAGAGAGAAGAGAGACAGCGTTTGGGATGGTGGAAAATGGAGTGAAAAGTGGAGGAAGCTTGTTTTACACTGGGAGCTACCAGTCTCTGTATGTGTTGGGGCAGTGCGAAGGTGATTTGTCTAGTGGTGATTGTGGCGATTGTGTGAAGAGTGCTGAGGATCAGGCTAAATCTCTGTGTGGTTATTCAATTTCTGCCAAAGTTTATCTTCAGAAGTGCTATATCAGCTACAACTTTTATCCTAATGGAGTGCCTGGGAATGGCGAGTCACCATCTTCGTCATCAGGAACTGGGCCTCACAACACCCAGAAGACAGTAGCTCTTGCAGTAGGAGGGGTTGCAGCTCTGGGATTCTTGATCGCTTGTTTGTTATTTGTGAAATCAGCGTTCAAGAAACGAGGTGGATTAGGTTCAACTTGTGGAATCTATGAAGGAAGTGCTTTATGGGGACACAAGATCATTGATCAAACTCACAGCATGCGAGATGAGAAGGGGAGTTATGAGTTTATAATTGTATGGAGCAAGCGAGCGACAAAGGGGACGGTGGGATCTGGGCGGAGGGAAGAGTTCGGAAGAGGCGGACTGGCTACGACAGAGCACGAAGAAGGAAGAAAGGGGACGAAGGATGAGTCGTTATCGGAGGAAGATGAAGAGGGGAGACATGCTGGTAACCAGAATATGGAGATGGCTGAGTTTCAGAAGACGGCGGGAGATGTTTCCGGCGAAACCCTGCCGGAGAAAACGTCAGAGTCCACCATGGGTAGGGCTAGAAAGAAGTTGGAGGTAGAATTTGGGCCAGCGATGCTCGTCAAGCGACAGTTTCGGCGCAATGGTGGTACCGCAGAGAAAAAGGTGGGACCGGCGGGGATGGAGCGGAAGGGAAGGAGAGAATTGTGGAGAAGGATAAAGTGGGAAGGGAATGTGGTTATTGGGCCTACTATGCATAAGGCCCAATACTTCATGGAAGCGCCCAACCCTTTTGCCCTCTTCGCAAGTGGGCGAGATGACCCAGGACCTAGTGGATCGTTTGCATCAGCAATGGTTATTCAGACGAATTTGAAGGCCGCCAGCTCTACTAAGGACATTGAGGTGGAGCCGGTCATTATTAACGAAGTGACGAATGATCAAGGGAATGACTCAACCATGCATGAGGATAACTGTCTCGTCTTAGACTAG 1650 0.4988 MGLIGKPCSLRSVFLFSVFALLLQRISAADFTDLVYKGCTDQKFQDPSGIYSQNLRSLLVTLVAQSAQKVFASTTSGDGQNAIMGLYQCRGDLSNSDCYKCVSKIPNMLDKLCGQVVAARVQLNGCYLRYEIVGFKQVSGTQLLYKVCGSIQASGSGFAERRETAFGMVENGVKSGGSLFYTGSYQSLYVLGQCEGDLSSGDCGDCVKSAEDQAKSLCGYSISAKVYLQKCYISYNFYPNGVPGNGESPSSSSGTGPHNTQKTVALAVGGVAALGFLIACLLFVKSAFKKRGGLGSTCGIYEGSALWGHKIIDQTHSMRDEKGSYEFIIVWSKRATKGTVGSGRREEFGRGGLATTEHEEGRKGTKDESLSEEDEEGRHAGNQNMEMAEFQKTAGDVSGETLPEKTSESTMGRARKKLEVEFGPAMLVKRQFRRNGGTAEKKVGPAGMERKGRRELWRRIKWEGNVVIGPTMHKAQYFMEAPNPFALFASGRDDPGPSGSFASAMVIQTNLKAASSTKDIEVEPVIINEVTNDQGNDSTMHEDNCLVLD 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1395 549 FunFam cysteine-rich repeat secretory protein 3 141 239 - -
Lele07g1395 549 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Lele07g1395 549 MobiDBLite consensus disorder prediction 340 382 - -
Lele07g1395 549 FunFam cysteine-rich repeat secretory protein 3 31 135 - -
Lele07g1395 549 MobiDBLite consensus disorder prediction 340 415 - -
Lele07g1395 549 Pfam Salt stress response/antifungal 39 131 IPR002902 -
Lele07g1395 549 Pfam Salt stress response/antifungal 180 237 IPR002902 -
Lele07g1395 549 Gene3D - 31 135 IPR038408 -
Lele07g1395 549 Gene3D - 141 239 IPR038408 -
Lele07g1395 549 ProSiteProfiles Gnk2-homologous domain profile. 140 240 IPR002902 -
Lele07g1395 549 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 12 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1395 Lele-ChrLele07 8481847 8487115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1395 8 239 Receptor kinase-like Gene Family AT4G05200 27.236 8.39e-17 82.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1395 07 8481847 8487115 Lele07g1395 07 8481847 8487115 ECH
Lele05g1340 05 8411642 8413288 Lele07g1395 07 8481847 8487115 hybridization
Lele06g1198 06 7549748 7556548 Lele07g1395 07 8481847 8487115 hybridization