Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1376 ATGACGGGATTTCGTCGGCCTAATGATCAGACCCCACCTTCGTCCTCCTCTTCCCACAGTTCCAACAGCAGTGGAAAAAATTTATTTAATTTGCTAGCGCACAGAGAGATTTCAAGATCAAAACAAGTGCCAAAACAGTACTGGGGAGCAGCAGCTTCTGAACCAAAAGCTGGTTCTTGTCCTCGTCCAAAAAATGATGCAGTGAGAGATTCAAAACACAGTTTCCTCTCATGGGTTGAGGCAGAATCATTGCGGCATTTATCAGCTAAATATTGTCCCTTGTTGCCTCCCCCACGGTCCACTATTGCAGCAGCATTTAGTCCAGATGGAAAAGTGCTTGCATCGACACATGGAGACCATACCGTAAAGATAATTGATTGGGAAACTGGAAGTTGCATAAATATGTTAATTGGCCATAGAAGGACCCCTTGGGTGGTTAGGTTCCATCCATTGCAACCACATATACTTGCTAGTGGAAGCTTGGATCAAGAAGTTCGCTTATGGGATGCTAACGCATCAAAATGCATTTTATTTCACCATTTCTATCGCCCCATTGCATCCATTGCTTTTCATGCCGAAGGGGAAATACTTGCGATTGCCTCAGGTCACAAGCTGTACATATGGCACTACAACAAGAGAGGTGAAGGATCCTCACCAACATTTGTGTTGAAGACAAGGCGTTCACTTCGGGCTGTTCACTTTCACCCTCATGCAGCACCATATCTTTTAACAGCTGAGGTCAATGATCTTGACTCTTCAGATTCCTCAATGACACAGGCTACATCTCCTGGTTATTTACAATATCCTCCACCTGCTGTGATTGTTGCAAATATTCATTTTAAGGAACATATTGCTTTTCCCAGCAGTGAACTACCTTATTTGTCGTTGCCTTTTTTCTTCTTGCCTTCATTTGATGGTGATGACTCAAGAATGGAAACACATAATGCTAGTCTCGTTGCTGGTTCAGAGAACATGCAAGTTGAATCTTCTGCATCAGCACAGTTTCAAGCAGTAACAAATGCTACTGAGCAATATAATAATACAGTGTCTCCCATGGATACAGTCTCTGAGATTCCTACTAGCTCTCAAACTAGTACAGAATACGTGGTCCATAGTTCCTTCTCTAATGGAATGGGAAATGGTATCAGTAACCTTGTTGTGAGTAGTATGGAGACTGACGAAACAGTACCAGCTGAAGGAAGCCAGCATGGAAACTCTACAAATGTCTATTCTCTGAGTAATGTGCTGCATGGTTTATACAGACAAACAACGAATCATGAGGGTCTTTCTGACTTGGGTCAATTTCACCGTTTTTTCCCCTCAAGAGACCCAAGTGGATGGGAGCTACCCTTTCTGCAAGGATGGTTAATGGGTCAAAGCCAAGTTGGTGTCCCCTTGGTGCTTCCTCATCTGAGTGGTAGTCAGGACAGTCTAGCTCAGATCGGGGCTTCCACCATGGCATCTAATATGCCCCCTCATGATGATGAAGCAACAACTTCATCTTCAGCTATTCCAGGAAGCACGATTATACCAGGAGCTCAGGGGAGATCTGGTTTGCGGAGTCATTTTCCACAATCTCAAGTTCCTACATCTGAATCTGGCAATATGGCCTCTTCCATTAATATCCCGCATGGTGGTACTGACATTCAAACCATTATAAGTCGGATTCAGTCAGAACTTGCCACATCAGTGGCTGCAGCAGCTGCTGCAGAGCTGCCTTGCACAGTGAAGCTAAGAGTATGGTCGCATGACATAAAATATCCCTGTGCCCCACTAAGTGCTGAAAGATGCCGTCTTACAATACCACATGCCGTCTTGTGCAGTGAAATGGGTGCCCATTTTTCACCATGTGGTAGGTTTCTGGCTGCATGTGTTGCATGTATGCTTCCTCATGTAGAAGCTGATTCAGGATTACAAACTCAAGTACAACATGAGTCAGGAGTTGCAACATCCCCAACACGACATCCAATCTCCGCTCACCAAGTTATGTACGAGCTCCGCATTTATTCCCTTGAGGAGGCAACATTTGGAACGGTGCTTGCGTCACGGGCAATTAGAGCAGCTCACTGTCTGACTTCAATCCAGTTCTCACCCACCTCTGAGCACATACTGCTTGCCTATGGTAGACGTCACGGATCTCTTCTTAAAAGCATTGTTATCGATGGAGAAACAACCCTGCCTATATATACAGTGTTAGAGGTATACAGAGTGTCAGATATGAAACTCGTCATGGTGCTTCCTAGTGCAGAGGATGAGGTCAATGTAGCATGCTTTCATCCTTTTCCTGGGAGAGGGCTTGTTTATGGAACTAAGGAAGGAAAGCTTAGGGTCCTTCACTATGATGGAGCTCATGCAGTAAATGGCACCAAAGCAAGTTACTTACCTGAGGACAACATTATTGGAGTCAACTAA 2412 0.4461 MTGFRRPNDQTPPSSSSSHSSNSSGKNLFNLLAHREISRSKQVPKQYWGAAASEPKAGSCPRPKNDAVRDSKHSFLSWVEAESLRHLSAKYCPLLPPPRSTIAAAFSPDGKVLASTHGDHTVKIIDWETGSCINMLIGHRRTPWVVRFHPLQPHILASGSLDQEVRLWDANASKCILFHHFYRPIASIAFHAEGEILAIASGHKLYIWHYNKRGEGSSPTFVLKTRRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTQATSPGYLQYPPPAVIVANIHFKEHIAFPSSELPYLSLPFFFLPSFDGDDSRMETHNASLVAGSENMQVESSASAQFQAVTNATEQYNNTVSPMDTVSEIPTSSQTSTEYVVHSSFSNGMGNGISNLVVSSMETDETVPAEGSQHGNSTNVYSLSNVLHGLYRQTTNHEGLSDLGQFHRFFPSRDPSGWELPFLQGWLMGQSQVGVPLVLPHLSGSQDSLAQIGASTMASNMPPHDDEATTSSSAIPGSTIIPGAQGRSGLRSHFPQSQVPTSESGNMASSINIPHGGTDIQTIISRIQSELATSVAAAAAAELPCTVKLRVWSHDIKYPCAPLSAERCRLTIPHAVLCSEMGAHFSPCGRFLAACVACMLPHVEADSGLQTQVQHESGVATSPTRHPISAHQVMYELRIYSLEEATFGTVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMKLVMVLPSAEDEVNVACFHPFPGRGLVYGTKEGKLRVLHYDGAHAVNGTKASYLPEDNIIGVN 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1376 803 MobiDBLite consensus disorder prediction 1 29 - -
Lele07g1376 803 MobiDBLite consensus disorder prediction 513 538 - -
Lele07g1376 803 MobiDBLite consensus disorder prediction 519 538 - -
Lele07g1376 803 Gene3D - 87 260 IPR015943 GO:0005515
Lele07g1376 803 FunFam Activating molecule in BECN1-regulated autophagy protein 83 263 - -
Lele07g1376 803 MobiDBLite consensus disorder prediction 1 66 - -
Lele07g1376 803 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 23 799 - -
Lele07g1376 803 Pfam WD domain, G-beta repeat 130 169 IPR001680 GO:0005515
Lele07g1376 803 Pfam WD domain, G-beta repeat 103 126 IPR001680 GO:0005515
Lele07g1376 803 SMART WD40_4 171 209 IPR001680 GO:0005515
Lele07g1376 803 SMART WD40_4 129 169 IPR001680 GO:0005515
Lele07g1376 803 SMART WD40_4 739 779 IPR001680 GO:0005515
Lele07g1376 803 SMART WD40_4 88 126 IPR001680 GO:0005515
Lele07g1376 803 ProSiteProfiles Trp-Asp (WD) repeats profile. 136 178 IPR001680 GO:0005515
Lele07g1376 803 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 136 169 - -
Lele07g1376 803 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 98 781 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1376 Lele-ChrLele07 8372810 8379385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1376 89 242 Miscellaneous Gene Families AT5G08390 30.864 3.00e-08 55.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1376 07 8372810 8379385 Lele07g1376 07 8372810 8379385 ECH
Lele05g1326 05 8311982 8319195 Lele07g1376 07 8372810 8379385 hybridization
Lele06g1187 06 7450230 7456774 Lele07g1376 07 8372810 8379385 hybridization