Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1175 ATGGATGGATCTCGTAAACACCAGGTATCCTTGAGAGGAGCAAGCGCAAAGGAGATAACAAGGGATGCCCTTCTCGAGAAGGTTTCCCGGGAAAGAGAACTTCGCAATCATGCAAAACGGGCTACTGCTGCTGCTCTATTCATTCAGAGAGTATGGAGGCGCTACAAGGTTGCAAAAATGGTTGCTCAGCAACTTCACCAGGAGTGGGAGACATTGGTGAATCATTACACTGGTTTTACGACAGCACTGTGGATTGCTAACAATTTGTTGCGACCATTTCTTTTCTTTATTAGCCGGTTCTCATCTGAGAATCAGAAGGTTCACAGCAAGAAAATAGACTCTATGAGGATTTGCTTTACAATGCTATTGGAGAGCCTGAACTCTTCTGATTCAAAGAGGAACTTCTGCTCTCTAGTAATTGGTACACCTGAAGAAAGGAGAATTTGGAGTCACCAAGCTCGAGGGCTGATTTCTGTTGGCTTTGTCATTCTTTCAGAGTTTAGTAAAGGCATTTCGAGAAATCAAGATATTACCTTGGTTACCTCCCTTGCAATGCGTGTTGTTGTTCTGTTAACTGATCTGAAAGGGTGGAAAGGCATTACTGATGACAATCGTCAAGATGCTGATATAGCAGTGAAAGTATTGATTGAGTACATGTGGAGTAATGCCAGTGGTAGTTACGTGTCTATTAGTAGATATATTAGTTCATTGGATAACTATTCTTCACAAACAAAGAATACTAACCAGACAGATGATAAGTTTTTAATTACTGCCAGTACAATAACTCTGGCCTTGCGGCCATTCTATTTGAGAAGATCTGATGTCAATGTCCCTGCTATGTTGGATGTGAACCATGCTGCTAGGCAGTATTGCATATATATGCTGACAATTCCTTGGCTTGTGAAGCGTCTGCCACCTGTTCTTCGACCTGCTTTAAAGCACAACTCTATTTTGTTCCCATGCTTTCTTGGTATACTGATTTTGAGAGAGAATATTTCGATGGAGATATCGCATTTGGTTCACTTAGATGCTCTTATCTCTTCCAAAGCAATTCCAGCAGTTGGTTGGGCTCTCACTAACATTATCTGCCTTGCCATGGGGAATGAAAGTGAATCTGTGGATCCTCAATGCTTCTATCAAGGTTTAGACCATGCATTATATGTCCATGTTGTTAACTATCTTGTGGAAACCCTACTGGCTCATCTTTATGATGTTGGATGGATTAAAAAGGGGAAGACAGCTATTCAGAATGATGTTGAAGCTTCAGCAGAACCCATGGATACAAGTCTTGATGAGAATGAAGCGGCATATGACTCCTTACTGATTTCCTACATAGATCAATTTAGGCCTGTTTGTCAGCATTGGCATCTTCAAAATCTCTTGGCTGCAGCAAACAAAGATGCCCCTAACAGGGCTGAGATTCTGCTTCCAAATGGTCTGGAATGCTTGAGAAAGCTGGATTTAAGTGATGTTGCTCTTTTTTATTCGAACATGCTAAAAATATATTCAGTCTTTAATCCAATTCGTGGCTCCTTGCCAGTTCTCAACATGCTATCCTTTACTCCTGGATTTCTTGTCAAGGTGTGGCACGTATTGGAGGATTCCATATTTCATGGAGACAAGCACACTTCTGATAACCACATGAGTGAAAAAAGCAAACATAATGCATCTGAGAGGAGGCTAAAACATGTCAGTAAGGACGGGGCTAATAAGTGGGTCAGTGTTCTTCATAAATTAACTGGTAAGTCCCAAGCTGAAACGAATAATGCTGAACCCATCAGCAGTCATCCTGAGCCTAGCCAAACGAATGAGGATTTATCTGATGTATGGGACATAGAGCCTATGAGGTGTGGTCCACAAGGCATTTCTAAAGATACATTTGCTCTACTTCATATATTCTGTGCCACCTATTCTCACCTACTTTTAGTTCTTGATGACATAGAGTTCTATGAGAAACAGGTTCCATTTAAATTGGAGAAGCAACGAAGAATTGCATCAATGCTCAATACTCTAGTGTATAATGGCTTGTCCTATGGTATTAGTGAGCAGAATAGACCCCTCATGGACTGCGCTATCAGATGCTTACATTTAATGTATGAAAGGAATTGCCGGCATCAATTTTGTCCTCCTGATTTGTGGCTTTCCCCTGCTAGAAAAAGCCGGCCTCCTATTGCAGTGGCTGCCAGAACTCATGAAATTTCATCAGTCAGTATAAGATGTGATGATTCATTGACTGTCCCGACTATGGGTTCTGTTATCACCACGACTCCTCATGTTTTCCCTTTTGAAGAGAGAGTTGAGATGTTTCGAGAGTTCATTAAGATGGATAAAGCCTCCCGAAAAATGGCTGGGGAAATTTCTGAACCTGGTTCACGAGCTATTGAGATAGTAGTACGTCGGGGTCATATTGTTGAAGATGGATTTCGGCAACTAAATTCCCTTGGGACAAGGTTGAAATCATCCATCCATGTTTCTTTTGTGAGTGAATGTGGCCTTCCTGAGGCGGGCCTGGATTATGGTGGGTTATCTAAAGAATTTTTAACGGACATATCAAAAGCGGCCTTTGCCCCAGAATATGGGCTATTTTCCCAAACCTCAACCTCCGACAGGCTTCTAATACCAAATTCTTCTGCAAGATTTATGGATAATGGTCTTGAGATGATTGAGTTTCTTGGAAGAGTCGTTGGTAAAGCTCTTTACGAAGGAATATTACTTGATTACTCTTTCTCACACGTTTTTGTACAAAAATTATTGGGGAGATATAGCTTTCTTGATGAGTTATCAACACTTGATCCAGAGCTATACAGGAATGTTATGTATGTCAAGCATTATGATGGTAATGTTGAGGAGCTCTCTCTTGATTTTACTGTTACTGAAGAATCATTTGGGAAATGGCATGTTGTTGAGCTAAGATCTGGTGGCAAAGATATCTTGGTGATGAATGAGAACAAAATGCAGTACATACATGCGATGGCAGACTACAAACTCAATCAACAGATATTGCCCTTCTCAAATGCATTCTATAGAGGATTGACTGATCTTATATCTCCATCCTGGTTGAAGTTATTCAATGCAAATGAATTTAATCAGTTGCTTTCAGGTGGAAAGTATGATATAGATATTGATGATTTAAAAAATAACACTCGATACACAGGTGGTTATAATGAAGGAAGCCGGACAATCAAGATGTTTTGGGAGGTGATTAAAGACTTTGAACCCCAAGAACGTTGCATGCTTCTTAAATTTGTCACCAGTTGTTCTCGTGCTCCATTACTTGGGTTCAAATATTTGCAGCCAACTTTTACTATCCACAAGGTTGCTAGTGATGCCCCTCTTTGGGCGACATTTGGAGGACAAGATGTACAGCGGCTTCCTTCAGCTTCAACCTGCTACAATACCCTCAAGCTTCCAACCTACAAACGTGCAAGTTCGTTGAGAACAAAACTTCTATATGCAATCAGTTCAAATGCCGGATTTGAACTCTCTTAA 3489 0.4079 MDGSRKHQVSLRGASAKEITRDALLEKVSRERELRNHAKRATAAALFIQRVWRRYKVAKMVAQQLHQEWETLVNHYTGFTTALWIANNLLRPFLFFISRFSSENQKVHSKKIDSMRICFTMLLESLNSSDSKRNFCSLVIGTPEERRIWSHQARGLISVGFVILSEFSKGISRNQDITLVTSLAMRVVVLLTDLKGWKGITDDNRQDADIAVKVLIEYMWSNASGSYVSISRYISSLDNYSSQTKNTNQTDDKFLITASTITLALRPFYLRRSDVNVPAMLDVNHAARQYCIYMLTIPWLVKRLPPVLRPALKHNSILFPCFLGILILRENISMEISHLVHLDALISSKAIPAVGWALTNIICLAMGNESESVDPQCFYQGLDHALYVHVVNYLVETLLAHLYDVGWIKKGKTAIQNDVEASAEPMDTSLDENEAAYDSLLISYIDQFRPVCQHWHLQNLLAAANKDAPNRAEILLPNGLECLRKLDLSDVALFYSNMLKIYSVFNPIRGSLPVLNMLSFTPGFLVKVWHVLEDSIFHGDKHTSDNHMSEKSKHNASERRLKHVSKDGANKWVSVLHKLTGKSQAETNNAEPISSHPEPSQTNEDLSDVWDIEPMRCGPQGISKDTFALLHIFCATYSHLLLVLDDIEFYEKQVPFKLEKQRRIASMLNTLVYNGLSYGISEQNRPLMDCAIRCLHLMYERNCRHQFCPPDLWLSPARKSRPPIAVAARTHEISSVSIRCDDSLTVPTMGSVITTTPHVFPFEERVEMFREFIKMDKASRKMAGEISEPGSRAIEIVVRRGHIVEDGFRQLNSLGTRLKSSIHVSFVSECGLPEAGLDYGGLSKEFLTDISKAAFAPEYGLFSQTSTSDRLLIPNSSARFMDNGLEMIEFLGRVVGKALYEGILLDYSFSHVFVQKLLGRYSFLDELSTLDPELYRNVMYVKHYDGNVEELSLDFTVTEESFGKWHVVELRSGGKDILVMNENKMQYIHAMADYKLNQQILPFSNAFYRGLTDLISPSWLKLFNANEFNQLLSGGKYDIDIDDLKNNTRYTGGYNEGSRTIKMFWEVIKDFEPQERCMLLKFVTSCSRAPLLGFKYLQPTFTIHKVASDAPLWATFGGQDVQRLPSASTCYNTLKLPTYKRASSLRTKLLYAISSNAGFELS 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1175 1162 Gene3D Hect, E3 ligase catalytic domain 1037 1161 - -
Lele07g1175 1162 SMART hect_3 812 1162 IPR000569 GO:0004842
Lele07g1175 1162 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 6 1162 IPR044611 GO:0000209|GO:0061630
Lele07g1175 1162 FunFam E3 ubiquitin-protein ligase UPL7 1037 1161 - -
Lele07g1175 1162 SUPERFAMILY Hect, E3 ligase catalytic domain 794 1155 IPR035983 GO:0004842
Lele07g1175 1162 FunFam Putative Ubiquitin-protein ligase E3C 920 999 - -
Lele07g1175 1162 MobiDBLite consensus disorder prediction 583 605 - -
Lele07g1175 1162 ProSiteProfiles HECT domain profile. 818 1162 IPR000569 GO:0004842
Lele07g1175 1162 Gene3D Hect, E3 ligase catalytic domains 796 1034 - -
Lele07g1175 1162 Pfam HECT-domain (ubiquitin-transferase) 849 1162 IPR000569 GO:0004842
Lele07g1175 1162 Gene3D Hect, E3 ligase catalytic domain 920 999 - -
Lele07g1175 1162 CDD HECTc 794 1160 IPR000569 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1175 Lele-ChrLele07 7101393 7110483 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1175 07 7101393 7110483 Lele07g1175 07 7101393 7110483 ECH
Lele05g1132 05 7070163 7084557 Lele07g1175 07 7101393 7110483 hybridization
Lele06g0996 06 6178365 6187657 Lele07g1175 07 7101393 7110483 hybridization