Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0996 ATGGATGGATCTCGTAAACACCAGGTATCCTTGAGAGGAGCAAGCGCAAAGGAGATAACAAGGGACGCCCTTCTTGAGAAGGTTTCCCGGGAAAGAGAACTTCGCAATTATGCTAAACGGGCTACTGCTGCTGCTCTATTCATTCAGAGAGTATGGAGGCGCTACAAGGTTACAAGGATGGTTGCTCAGCAACTTCAGCAGGAGTGGGAGACAATGGTGAATCATTACACTGGTTTTACGGCAGCAATGTGGATTGCTAACAATTTGTTGCGACCATTTCTTTTCTTTATAAGCCGGTTCTCATCTGAGCATCAGAAGGTTCACGGCAAGAAAATAGACTCTATGAGGATTTGCTTTACAATCCTATTGGAGAGCCTGAACTCTTCTGATTCAAAGAGGAACTTCTGCTCTCTAGGAATTGGTACACCTGAAGAAAGGAGAATTTGGAGTCACCAAGCTCGAGGGTTGATTTCTGTTGGCTTTGCCATTCTTTCAGAGTTTAGTAAAGGCATTTTGAGAAATCAAGATATTACCTTAGTTACCTCCCTTGCAATGCGTGTTCTTGTTATCTTAACTGATCTGAAAGGCTGGAAAGGCATTACTGATGACAATCGTCAAGATGCTGACATAGCAGTGAAAGGTTTGATTGAGTACATGGGGAGTAATGCCAGTGGTAGTTACGTGTCTATTAGTAGATATATTAATTCATTGGATAACTATTCTTCACAAACAAAGAATATTAACCAGACAGATGATAAATTTTTAATTACTGCCAGTACAATAACTTTGGCATTGCGGCCATTTTATTTGAGAAGCTCTAATATTGTCAGTGCCCCTGCTATGTTGGATGTGAACCATGCTGCTAGGCAGTATTGCATATATATGCTGACAATTCCTTGGCTTGTGAAGCGTCTGCCTCCTGTTCTTCGACCTGCTTTAAAGCACGACTCTATTTTGTTCCCATGCTTTCTTGGAATATTGATTTTGAGGGAGAATATTTCAATGGAGACATCACATTTGTTTCATTTAGACACTCTTATCTCTTCCAAGGCAATTCCGGCAGTTGGTTGGGCTCTCACTAACATTATCTGCCTAGCGATGGGGAATGAACATGAATCTGTGGATCCTCAATGCTTCCATCAAGGGTTAGACCATGCATTATATGTCCATGTTGTTAACTATCTTGTGGAAGCCCTATTGGCTCATCTTAATGGTGTTGGATGGATTAAAAAGGGGAAGAAAGCTATTCAGAATGATGTTGAAGCTTCAGCAGAACCCATGGGTACAATTTTTGATGAGAATGAAGCGGCGTACGACTCCTTACTGATTCCCTACATAGATCAATTTAGGCCTGTATGTCAGCAGTGGCATCTTCAAAATCTCTTGGCTGCATCAAACAAAGTTGCTACCAACGGGGCTGGGATTCTGCTTCCAAATGGTCTGGAATGCTTGGGAAAGCTGGACCTAAGTGATATTGCTCTTTTTTATTCAAACATGCTAAACATATATTCAGTCTTGAATCCAATTCGTGGCTCCTTGCCAGTTCTCAACATGCTATCCTTTACTCCTGGGTTTCTTGTCAAGGTGTGGCATGTATTGGAGGATTACATTTTTCATGAAGACAATCACACTTCTAATAACCACATGAGTGAAAAAAGCAAACATAATGCATCTGAGAGGAGGCTAAAACATGTCAGTAAGGATGGGGTTAATAAGTGGGTCGGTGTTCTTCATAAATTAACTGGTAAGTCCCAATCTGCAACGAATAATGCTGAACCCATCAGCAGTCATCGTGAGCCTAGCCAGACGAATGAGGATTCATCTGATGTATGGGACATAGAGCCTATGAGGCGTGGTCCACAAGGCATTTCTAAAGATACATTTGCTCTACTTCATGTATTCTGTGCCACCTATTCTCACCTACTTTTAGTTCTTGATGACATAGAGTTCTATGAGAAACAGGTTCCATTTAAATTAGAGAAGCAACGAAGAATTGCATCAATGCTCAATACTCTGGTGTATAATGGTTTGTCCCATGGTATTAGTGAGCAGAATAGACCCCTCATGGACTGCGCTATCAGCTGCTTACATTTAATGTATGAACGGAATTGCCGGCATCAATTTTGTCCTCCTGATTTGTGGCTTTCACCTGCTAGAAATAGCCGGCCTCCTATTGCAGTGGCTGCCAGAACTCATGAAATTTCATCAGTCAATAGATATGATGATTCATTGACTGTCCCGAGTATGGGTTCTGTTATCACCACAACTCCTCATGTTTTCCCTTTTGAAGAGAGAGTTGAGATGTTTCGAGAGTTCATTAAGATGGATAAAGCCTCCCGAAAAATGGCCGGGGAAATTTCTGAACCTGGTTCACGAGCTATTGAGATAGTAGTACGTCGGGGTCATATTGTTGAAGATGGATTTCAGCAACTAAATTCCCTTGGGACAAGGTTGAAATCATCCATCCATGTTTCTTTTGTGAGTGAATGTGGCCTTCCGGAGGCTGGCCTGGATTATGGTGGGTTATCTAAAGAATTTTTAACAGACATATCAAAAGCGGCCTTTGCCCCAGAATATGGGCTATTTTCCCAAACCTCAACCTCGGACAGGCTTCTAATACCAAATTCTTCTGCAAGATTTTTGGATAATGGTCTTCAGATGATCGAGTTTCTTGGAAGAGTAGTTGGTAAAGCACTTTATGAAGGAATATTACTTGATTACTCTTTATCTCACGTTTTTGTACAAAAATTATTGGGGAGATATAGCTTTCTTGACGAGTTATCAACACTTGATCCAGAGCTATACAGGAATCTTATGTATGTCAAGTCTGCAGTAAGCTTCACATATTCTTTCATGCAGCATTATGATGGTGATGTCGAGGAGCTCTCTCTTGATTTTACTGTTACTGAAGAATCATTTGGTAAATGGCATGCTGTTGAGCTAAGGTCTGGTGGCAGAGATATCTTGGTGACGAATGAGAACAAAATGCAGTACATACATGCGATGGCAGACTACAAACTTAATCAACAGATATTGCCCTTCTCAAATGCATTCTATAGAGGATTGACTGATCTTATATCTCCATCCTGGTTGAAGTTATTCAATGCAAGTGAATTTAATCAGTTACTTTCAGGGGGACAGTATGATATTGATATTGATGATTTAAAAAATAACACTCAATACACTGGTGGTTATAATGAAGGAAGTCGGACAATCAAGATATTTTGGGAGGTGATTAAAGACTTTGAACCCCAAGAACGCTGCATGCTTCTTAAATTTGTCACTAGTTGTTCTCGTGCTCCATTACTTGGGTTCAAATATTTGCAGCCAACTTTTACTATCCACAAGGACATTGCTAAGAGTTTTAGTTGTATTTCATCTGATGCTCAGTGCTTAAGTTACTATAAGCTGAAAGAGTTGTTTAATCACCATGCCATTTATCGGCAACAGAAATCTCTGGTCTATGCGTTCATCATCACTGCAATTTGCATGGTTGCATCATCTTTTAACGTGACCAGTCTACATATTTATGTTTTGGCAACACTCTTTTGTGTGGTCTGGTTAGGGGTTTGTTTCTGCGACCTTGTTGCTAGTGACGCCCCTCTTTGGGCGTCATTTGGAGGACAAGATGTAGAGCGGCTTCCTTCAGCTTCAACCTGCTACAATACCCTCAAGCTTCCAACCTACAAACGTGCAAGTACATTGAGAACGAAGCTTCTATATGCAATCAGTTCAAATGCCGGATTTGAGCTCTCTTAA 3759 0.4086 MDGSRKHQVSLRGASAKEITRDALLEKVSRERELRNYAKRATAAALFIQRVWRRYKVTRMVAQQLQQEWETMVNHYTGFTAAMWIANNLLRPFLFFISRFSSEHQKVHGKKIDSMRICFTILLESLNSSDSKRNFCSLGIGTPEERRIWSHQARGLISVGFAILSEFSKGILRNQDITLVTSLAMRVLVILTDLKGWKGITDDNRQDADIAVKGLIEYMGSNASGSYVSISRYINSLDNYSSQTKNINQTDDKFLITASTITLALRPFYLRSSNIVSAPAMLDVNHAARQYCIYMLTIPWLVKRLPPVLRPALKHDSILFPCFLGILILRENISMETSHLFHLDTLISSKAIPAVGWALTNIICLAMGNEHESVDPQCFHQGLDHALYVHVVNYLVEALLAHLNGVGWIKKGKKAIQNDVEASAEPMGTIFDENEAAYDSLLIPYIDQFRPVCQQWHLQNLLAASNKVATNGAGILLPNGLECLGKLDLSDIALFYSNMLNIYSVLNPIRGSLPVLNMLSFTPGFLVKVWHVLEDYIFHEDNHTSNNHMSEKSKHNASERRLKHVSKDGVNKWVGVLHKLTGKSQSATNNAEPISSHREPSQTNEDSSDVWDIEPMRRGPQGISKDTFALLHVFCATYSHLLLVLDDIEFYEKQVPFKLEKQRRIASMLNTLVYNGLSHGISEQNRPLMDCAISCLHLMYERNCRHQFCPPDLWLSPARNSRPPIAVAARTHEISSVNRYDDSLTVPSMGSVITTTPHVFPFEERVEMFREFIKMDKASRKMAGEISEPGSRAIEIVVRRGHIVEDGFQQLNSLGTRLKSSIHVSFVSECGLPEAGLDYGGLSKEFLTDISKAAFAPEYGLFSQTSTSDRLLIPNSSARFLDNGLQMIEFLGRVVGKALYEGILLDYSLSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKSAVSFTYSFMQHYDGDVEELSLDFTVTEESFGKWHAVELRSGGRDILVTNENKMQYIHAMADYKLNQQILPFSNAFYRGLTDLISPSWLKLFNASEFNQLLSGGQYDIDIDDLKNNTQYTGGYNEGSRTIKIFWEVIKDFEPQERCMLLKFVTSCSRAPLLGFKYLQPTFTIHKDIAKSFSCISSDAQCLSYYKLKELFNHHAIYRQQKSLVYAFIITAICMVASSFNVTSLHIYVLATLFCVVWLGVCFCDLVASDAPLWASFGGQDVERLPSASTCYNTLKLPTYKRASTLRTKLLYAISSNAGFELS 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0996 1252 FunFam Putative Ubiquitin-protein ligase E3C 920 1010 - -
Lele06g0996 1252 ProSiteProfiles HECT domain profile. 818 1252 IPR000569 GO:0004842
Lele06g0996 1252 Gene3D Hect, E3 ligase catalytic domains 796 1045 - -
Lele06g0996 1252 MobiDBLite consensus disorder prediction 584 616 - -
Lele06g0996 1252 MobiDBLite consensus disorder prediction 584 601 - -
Lele06g0996 1252 Gene3D Hect, E3 ligase catalytic domain 1048 1157 - -
Lele06g0996 1252 CDD HECTc 794 1250 IPR000569 GO:0004842
Lele06g0996 1252 Gene3D Hect, E3 ligase catalytic domain 920 1010 - -
Lele06g0996 1252 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 6 1252 IPR044611 GO:0000209|GO:0061630
Lele06g0996 1252 Gene3D Hect, E3 ligase catalytic domain 1181 1249 - -
Lele06g0996 1252 Pfam HECT-domain (ubiquitin-transferase) 849 1252 IPR000569 GO:0004842
Lele06g0996 1252 SMART hect_3 812 1252 IPR000569 GO:0004842
Lele06g0996 1252 SUPERFAMILY Hect, E3 ligase catalytic domain 794 1245 IPR035983 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0996 Lele-ChrLele06 6178365 6187657 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0996 06 6178365 6187657 Lele06g0996 06 6178365 6187657 ECH
Lele06g0996 06 6178365 6187657 Lele07g1175 07 7101393 7110483 hybridization
Lele06g0996 06 6178365 6187657 Lele08g0983 08 6239642 6249438 hybridization