Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1132 ATGGATGGATCTCGTAAACACCAGGTATCCTTGAGAGGAGCAAGCGCAAAGGAGATAACAAGGGATGCCCTTCTCGAGAAGGTTTCCCGGGAAAGAGAACTTCGCAATCATGCAAAACAGGCTACTGCTGCTGCTCTATTCATTCAGAGAGTATGGAGGCGCTTCAAGGTTACAAGGAGGGTTGCTCAGCAACTTCACCAGGAGTGGGAGACATTGGTGAATCATTACACTGGTGTTACGACAGCACTGTGGATTGCTAACAATTTGTTGCGACCATTTCTTTTCTTTATAAGCCGGTTCTCATCTGAGCATCAGAAGTTCAGTGGATATGCAGATTTTGTTAAGCTGAAAAGCCTTAGGTTGGAAGTCCGTTGTGCTTGTAACTTAGTTCACTGTATGCCCGTAGTTCTTCCATCTAGTTAGTTTAGTAAAGGCATTTCAAGAAATCAAGATATTACCTTGGTTACCTCCCTTGCAATGCGTGTTGTTGTTCTGTTAACTGATCTGAAAGGGTGGAAAGGCATTACTGATGACAATCGTCAAGATGCTGATATAGCAGTGAAAGGTTTGATTGAGTACATGCGGAGTACTGCCAGTGATAGTTATGTGTCCATTAGTAGATATATTAGTTCATTGGATAGCTATTCTTCACAAACAAAGAATACTAACCAGACAGATGATAAGTTTTTAATTACTGCCAGTACAATAACTCTGGCCTTGCGGCCATTCTATTTGAGAAGCTCTGATGTCAATGTCCCTGCTATGTTGGATGTGAACCTTGCTGCTAGGCAGTATTGCATATATATGCTGACGATTCCTTGGCTTGTGAAGCGTCTGCCACCTGTTCTTCGACCTGCTTTAAAGCACAACTCTATTTTGTTCCCATGCTTTCTTGGTATATTGGAAATTGATGGATGCTGGATGAGGGATTTGTCTTTCTATAGCAGTATGGATGATAATTCGAAGATTTTGAGAGAGAATATTTCAATGGAGACATCACATTTGGTTCATTTAGACGCTCTTACCTCTTCCAAGGCAATTCCAGCAATTGGTTGGGCTCTCACTAACATTATCTGCCTTGCCATAGGGAATGGAAGTGAATCTGTGGATCCTCAATGCTTCCATCAAGGTTTAGACCATGCATTATATGTCCATGTTGTTAACTATCTTGTGGAAACTCTACTGGCTCATCTTTATGATGTTGGATGGATTAAAAAGGGGAAGACAGCTATTCAGAATGATGTTGAAGCTTCAGCAGAACCCATGGATACAAGTCTTGATGAGAATGAAGCGGCATATGATTCCTTACTGATTTCCTACATAGATCAATTTAGGCCTGTTTGTCAGCAGTGGCATCTTCAAAATCTCTTGGCTGCAGCAAACAAAGATGCCCCCAACGGGGCTGAGATTCTGCTTCCAAATGCTCTGGAATGCTTGAGAAAGCTGGATTTAAGTGATGTTGCTCTTTTTTATTCGAACATGCTAAAAATATATTCAGTCTTTAATCCAATTTGTGGCTCCTTGCCAGTTCTCAACATGTTATCCTTTACTCCTGGATTTCTTGTCAAGGTGTGGCACGTATTGGAGGATTCCATATTTCATGGAGACGGTCACAATTCTGATAACGACATGAGTGAAAAAAGCAAACATAATGCATCTGAGAGGAGGCTAAAACATGTCAGTAAGGACGGGGCTAATAAGTGGGTCAGTGTTTTTCATAAATTAACTGGTAAGTCCCAAGCTGAAACGAATAATGCTGAACCCATCAGCAGTCATCCTGAGCCTAGCCAAACGAGTGAGGATTTATCTGATGTATGGGACATAGAGCCTATGAGGTGTGGTCCACAAGGCATTTCTAAAGATACATTTGCTCTATTTCATATATTCTGTGCCACCTATTCTCACCTACTTTTAGTTCTTGATGACATAGAGTTCTATGAGAAACAGAATAGACCCCTCATGGACTGTGCTATCAGATGCTTACATTTAATGTATGAAAGGAATTGCCGGCATCAATTTTGTCCTCCTGATTTATGGCTTTCCCCTGCTAGAAAAAGCCGGCCTCCTATTGCAGCGGCTGCCAGAACTCATGAAATTTCATCAGTCAATTTAAGATATGATGATTCATTGACTGTCCCGACTATGGGTTCTGTTATCACCACGACTCCTCATGTTTTCCCTTTTGAAGAGAGTTATCTATGTGATAGTCAGTCTAACATAGTTGAGATGTTTCGAGAGTTCATTAAGATGGATAAAGCCTCCCGAAAAATGGCTGGGGAAATTTCTGAACCTGGTTCACGAGCTATTGAGATAGTAGTACGTCGGGGTCATATTGTTGAAGATGGATTTCGGCAACTAAATTCCCTTGGTACAAGGTTGAAATCATCCATCCATGTTTCTTTTGTGAGTGAATGTGGCCTTCCTGAGGCGGGTCTGGATTATGGTGGGTTATCTAAAGAATTTTTAACGGACATATCAAAAGCGGCCTTTGCCCCAGAATATGGGCTATTTTCCCAAACCTCAACCTCCAACAGGCTTCTAATACCAAGTTCTTCTGCAAGATTTATGGATAATGGTCTTCAGATGATTGAGTTTCTTGGAAGAGTTGTTGGTAAAGCTCTTTACGAAGGAATATTACTTGATTACTCTTTCTCACACGTTTTTGTACAAAAATTATTGGGGAGATATAGCTTTCTTGATGAGTTATCAACACTTGATCTAGAGCTATACAAGAATCTTATGTATGTCAAGTTTACAGGAAGCTTCACATATTCTTTCATGCAGCATTATGATGGTGATGTTGAGGAGCTCTCTCTTGATTTTACTGTTACTGAAGAATCATTTGGGAAATGGCATGTTGTTGAGCTAAGATCTGGTGGCAAAGATATCTTGGTGACGAATGAGAACAAAATGCAGTACATACATGCGATGGCAGACTACAAACTCAATCAACAGATATTGCCCTTCTCAAATGCATTCTATAGAGGATTGACTGATCTTATATCTCCATCCTGGTTGAAGTTATTCAATGCAAATGAATTTAATCAGTTGCTTTCAGGTGGAAAGTATGATATTGATATTGATGATTTAAAAAATAACACTCGATACACAGGTGGTTATAATGAAGGAAGCCGGACAATCAAGATATTTTGGGAGGTGATTAAAGACTTTGAACCCCAAGAACGTGGCATGCTTCTTAAATTTGTCACCAGTTGTTCTCGTGCTCCATTACTTGGGTTCAAATATTTGCAGCCAACTTTTACTATCCACAAGGACATTGCTAAGAGTCTTAGTTGTATTTCATCCGATGATCGGCGCTTGAGTTACTATGAGCTGAAAGAGTTGTCTTGTCACCATGCATTTATCGGCAATAGGAGTGACCAGTCTACATATTTATGTTCTGGCAACACTTTTTTGTGTGATCTGGTTAATGGTTTGTTTCTACGACCTTGTAAGGTTGCTAGTGATGCCCCTCTTTGGGCGACATTTGGAGGACAAGATGTACAGCGGCTTCCTTCAGCTTCAACCTGCTACAATACCCTCAAGCTTCCAACCTACAAACGTGCAAGTTCGTTGAGAACAAAACTTCTATATGCAATCAGTTCAAATGCCGGATTTGAACTCTCTTAA 3630 0.4058 MDGSRKHQVSLRGASAKEITRDALLEKVSRERELRNHAKQATAAALFIQRVWRRFKVTRRVAQQLHQEWETLVNHYTGVTTALWIANNLLRPFLFFISRFSSEHQKFSGYADFVKLKSLRLEVRCACNLVHCMPVVLPSSXFSKGISRNQDITLVTSLAMRVVVLLTDLKGWKGITDDNRQDADIAVKGLIEYMRSTASDSYVSISRYISSLDSYSSQTKNTNQTDDKFLITASTITLALRPFYLRSSDVNVPAMLDVNLAARQYCIYMLTIPWLVKRLPPVLRPALKHNSILFPCFLGILEIDGCWMRDLSFYSSMDDNSKILRENISMETSHLVHLDALTSSKAIPAIGWALTNIICLAIGNGSESVDPQCFHQGLDHALYVHVVNYLVETLLAHLYDVGWIKKGKTAIQNDVEASAEPMDTSLDENEAAYDSLLISYIDQFRPVCQQWHLQNLLAAANKDAPNGAEILLPNALECLRKLDLSDVALFYSNMLKIYSVFNPICGSLPVLNMLSFTPGFLVKVWHVLEDSIFHGDGHNSDNDMSEKSKHNASERRLKHVSKDGANKWVSVFHKLTGKSQAETNNAEPISSHPEPSQTSEDLSDVWDIEPMRCGPQGISKDTFALFHIFCATYSHLLLVLDDIEFYEKQNRPLMDCAIRCLHLMYERNCRHQFCPPDLWLSPARKSRPPIAAAARTHEISSVNLRYDDSLTVPTMGSVITTTPHVFPFEESYLCDSQSNIVEMFREFIKMDKASRKMAGEISEPGSRAIEIVVRRGHIVEDGFRQLNSLGTRLKSSIHVSFVSECGLPEAGLDYGGLSKEFLTDISKAAFAPEYGLFSQTSTSNRLLIPSSSARFMDNGLQMIEFLGRVVGKALYEGILLDYSFSHVFVQKLLGRYSFLDELSTLDLELYKNLMYVKFTGSFTYSFMQHYDGDVEELSLDFTVTEESFGKWHVVELRSGGKDILVTNENKMQYIHAMADYKLNQQILPFSNAFYRGLTDLISPSWLKLFNANEFNQLLSGGKYDIDIDDLKNNTRYTGGYNEGSRTIKIFWEVIKDFEPQERGMLLKFVTSCSRAPLLGFKYLQPTFTIHKDIAKSLSCISSDDRRLSYYELKELSCHHAFIGNRSDQSTYLCSGNTFLCDLVNGLFLRPCKVASDAPLWATFGGQDVQRLPSASTCYNTLKLPTYKRASSLRTKLLYAISSNAGFELS 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1132 1209 CDD HECTc 769 1207 IPR000569 GO:0004842
Lele05g1132 1209 Gene3D Hect, E3 ligase catalytic domain 1023 1209 - -
Lele05g1132 1209 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 6 1209 IPR044611 GO:0000209|GO:0061630
Lele05g1132 1209 Gene3D Hect, E3 ligase catalytic domains 771 1020 - -
Lele05g1132 1209 SMART hect_3 787 1209 IPR000569 GO:0004842
Lele05g1132 1209 FunFam Putative Ubiquitin-protein ligase E3C 895 985 - -
Lele05g1132 1209 Pfam HECT-domain (ubiquitin-transferase) 824 1209 IPR000569 GO:0004842
Lele05g1132 1209 ProSiteProfiles HECT domain profile. 793 1209 IPR000569 GO:0004842
Lele05g1132 1209 SUPERFAMILY Hect, E3 ligase catalytic domain 769 1202 IPR035983 GO:0004842
Lele05g1132 1209 MobiDBLite consensus disorder prediction 582 601 - -
Lele05g1132 1209 Gene3D Hect, E3 ligase catalytic domain 895 985 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1132 Lele-ChrLele05 7070163 7084557 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1132 05 7070163 7084557 Lele05g1132 05 7070163 7084557 ECH
Lele05g1132 05 7070163 7084557 Lele07g1175 07 7101393 7110483 hybridization
Lele05g1132 05 7070163 7084557 Lele08g0983 08 6239642 6249438 hybridization