Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1040 ATGGATCCGGCGAAGACGCCGCTTGGCCAGATGTTACTGGACGAGATCACTCCAGTTGTGATGGTACTTTCAACTCCTTCTGTCGAAGAGGCTTGCCTCAAGAATGGCCTCAGCTTCCTTCAGATGCTGTCCCCATTCAGCTCTTTTGACAACATCGACGTGCCAGTAAGGACTGCCAGTGACCAGCCCTATAGGCTTCAGAAGTTCAAATTGCGATTATATTATGCTTCGGATGTTAGGAAGCCAGATTTGGAGGTAGCTAAAGAGCATTTAAAGCAAGTTATCACAGAGGCAGGGGAGAAAGAGTTCAGTGAGCTGAGTTTGGATACTCCAGAAATTAATCATGTACTGGAGAGTTCTCAATCCGGAAATGCACCATCCTGGCTTCAGTTTTTTAACAAAGAACTTATCCGTGTGGTCTCCTTTTCAGACCACGAAGCTTTTGATCATCCAGTGGCATGTCTTTTGGCTGTTTCTTCTAAGGATGAACAACCAATTAACAGATTTATTGACCTATTTAACACCAACAAGCTGCCTTCCCTTCTTAATGATGGCGTGATGGATCCAAAGATTTTGAGGCATTATTTATTGGTGCATGATAATCAAGATGGCCCTGCTGACAGGGCAACTAAAATATTGACAGAGATGAGGAGTACATTTGGTACTAGTGACTGTTCGTTGCTCTGTATCAATTCTTCAACTGATGCTCCGGTCAAACATGAAGAGAACGCGTGGGCTTCATATAAATCTGATGTCTCTCCTGGTCAAGATCCTGGTTTCTTTCTTGACACTGATGATATCAATATGATTAAAGACTTAATGCAAGATTTATCATCCAAGCACATCATTCCCAGCATGGAGCAAAAGATTCGTGTGCTAAACCAACAAGTTTCTGCAACACGGAAAGGCTTTAGAAACCAAATTAAAAATTTATGGTGGAGAAAAGGGAAAGAGGATGGCACGGATTCTATCAATGGTCCTATGTATGCCTTTAGCTCCACTGAATCCCAAATTCGAGTTTTGGGTGATTATGCTTTCATGTTAAGGGATTATGAACTTGCCTTGTCAAATTATCGCTTAATTTCCACGGATTACAAACTTGATAAAGCTTGGAAGCGCTATGCTGGTGTGCAGGAAATGATGGGACTTGCGTACTTCATGTTGGACCAATCCAGAAAGGAAGCTGAATATTGCATGGAAAATGCCTTTAACACTTATTTAGTATATTATTATGTCCAGAAACTTGGTTCATCTGGGCAGCAAAATGCCACACGATGTGGTCTCTGGTGGATAGAAATGTTGAATGCACGAGATCTATATAAGGAGGCAGCTCCAATTTATTTCCGCATTTGTGGTGAGGATATCCTACATTCGGCTGTGATGCTTGAACAAGCATCCTACTGCTACTTGCTGTCCAAACCTTCAATGTTACGTAAATTTGGATTTCATCTTGTGCTTTCTGGGGATCGTTATAACAAGTGTGATCAGATCAAACATGCAATCCGAACATACAGAAGTGCTCTCTCTGTTTTTAAGGGAAGTACATGGAGTTATATCAAAGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTGTGATGTGGCTGTCAAGCATATGTTGGAAATTTTGGCTTGTGGTCACCAGTCCAAGGCAACACAGGAGTTATTTTTGGGCGACTTTCTTCAAATAGTTCAGAAAACAGGACAAACGTTTGAAGTATCCAGACTTCAGTTGCCTGTAATCAACATTTCTTCACTCAAGGTTGTCTTTGAAGACCACCGAACTTTTGGATCACCTTCGGCTGCTAACACTAGAGAAAGCTTGTGGCGTTCCTTGGAGGAAGAAATAATACCATCGCTCTCTACTATGAAGAGCAATTGGTTGGAGTTGCAATCAAAGCTTATCTCAAAAAAATACAGAGAATCAAATGTTTGTGTTGCTGGAGAAGCCGTGAAGGTGAATGTCGAATTCAAAAACCCTCTTCAAATACCAATTCCTGTGTCTGGAGTTACCCTTGTATGCAAGCATTTTCCTGATGAAAATATTTCTAGGATGGAAAATGATAATGCGGGAAAACATAAAGAGGTGACGGCCTGCAGTTACATGAGCTCTGAGAATTCTTTTTTTGTGTCGGAGGTTGACTTCTTATTAAGGGGTGGTGAAACAACCATGGTGCAACTATCAGTTACTCCAAGAGAAGAAGGTACTCTGGAAGTTCTTGGTGTTAGGTGGAAATTGTTGGGTTCTATAGTCGGCTTTCATGACTTTGACTTTAATAATGTAAAGAACGTTTTAAAAGGAAAGAGGAAAGGGAAGCTCTCAACTAATGAAAACTTTAAGTTTTTAGTGATTAAGAGCATACCCAAGCTTCAAGGGTCCATTCACCCTTTCCCTGACAAGGCTTATGTGGGAGATTTACGGCACCTTGTTTTGGAGTTGAGAAACCCATCAGAGTTTCCTGTTAAGAATCTGAAAATGAAGATAAGTCATCCAAGATTTCTGAATATTGGACATCTGGAAAGTATGAAATCAGAGCTTCCGGCTTGCTTAATGAAGAAGGTAGATTCAGTACCAAGTGGTGCAAATGCTGATCCATTTAACATGTCTGACACAGTCTTTATGTTTCCAGAGGGCACTTCTGTTCAGGGTGCTACACCATTCGCATGGCCCCTTTGGTTTAGGGCAGCTTTTGCTGGCAATATTTCTCTATATATAAGCATATATTATGAAATTGGAGATATATCAAGCGTCATCAAATACCGTATTCTTCGGTTACAATACAATCTACAGGTCTTGCCATCATTAGATGTGTCTTTTCAAATTAGTCCTTCTCCATTGAGATTCCAAGAGTACCTTGTTCGAATGGATGTGGTTAACAAGACAGCCTCAGAAGATTTCCAAGTTAATCAACTGTCCTCTATTGGGAGCAACTGGGAAATATCATTACTTCAGCCTGCTGATACCATTTTCCCTTCACAATCATTGAAGGCTGGTCAAGCAATATCATGTTTCTTAACAATAAAGAATTGCAGGAGCCTATCGACTGCTAAGGACAATATATCTTTGGTTCCCGAGCCTGTCAAAAATGATATCAAATTGGTTCCTCAAGGTAGTGAGGATTCAGTTTATGATACGAGTAGTGAGCCTTTGGTCAATTTCCACCATTACGAAAGATTGCAGCAGGAATTACCCCATGAGGCACGGGGAGACCTGAGCACTGTTGATTTTGTATTGATCTCTCGACCGCTGCAGCGTAACAGTAATGCTGGGTTTGTTGACCATCCTCTTGTGATGTCTCATTATGCATGCCATTGCAGTACTGCAAGCACGGGCCCTATCTCTTGGATGTTGGATGGCCCTCGAACCTTACATCATAATTTTTCTGCATCCTTCTGCGAAATAAATCTGAAAATGCATCTTCACAATTACTCTGATGCCATCGCTTTCGTGCGCATTACCACCTCGGATTCTGCTGTCAATGTTGGGCATCTGAACAGTGTAAACATGGCTCAGTCAGTATCTTCTGATGAGCAAGGAGGTTGGCGTCATGTCACGCCAGTGAATGAAGTAAAAGTGACGTCAAACATTAGTGGGACAGAACCGGAAGAGCCTCTATCATTAGGAAGTGTCTCCCCATACATTTGGTCTGGATCAAGCTCGACCAATATCCACCTAGAGTCCATGTCCTCAGCTGAAATTCCTCTTCAGATCTGTGTGTTCTCTCCTGGGATATATGATCTGTCAAATTATGCATTGCATTGGAATCTTCTCCTGGGTGAAGGTCCGGGAGATCGAGATGAAACGGGGCAACAGTCAGGAAAGTGCCTGGGATATACATACTACTTAACTGTGCTCCAATCCACATGA 3882 0.4181 MDPAKTPLGQMLLDEITPVVMVLSTPSVEEACLKNGLSFLQMLSPFSSFDNIDVPVRTASDQPYRLQKFKLRLYYASDVRKPDLEVAKEHLKQVITEAGEKEFSELSLDTPEINHVLESSQSGNAPSWLQFFNKELIRVVSFSDHEAFDHPVACLLAVSSKDEQPINRFIDLFNTNKLPSLLNDGVMDPKILRHYLLVHDNQDGPADRATKILTEMRSTFGTSDCSLLCINSSTDAPVKHEENAWASYKSDVSPGQDPGFFLDTDDINMIKDLMQDLSSKHIIPSMEQKIRVLNQQVSATRKGFRNQIKNLWWRKGKEDGTDSINGPMYAFSSTESQIRVLGDYAFMLRDYELALSNYRLISTDYKLDKAWKRYAGVQEMMGLAYFMLDQSRKEAEYCMENAFNTYLVYYYVQKLGSSGQQNATRCGLWWIEMLNARDLYKEAAPIYFRICGEDILHSAVMLEQASYCYLLSKPSMLRKFGFHLVLSGDRYNKCDQIKHAIRTYRSALSVFKGSTWSYIKDHVHFHIGQWYASLGMCDVAVKHMLEILACGHQSKATQELFLGDFLQIVQKTGQTFEVSRLQLPVINISSLKVVFEDHRTFGSPSAANTRESLWRSLEEEIIPSLSTMKSNWLELQSKLISKKYRESNVCVAGEAVKVNVEFKNPLQIPIPVSGVTLVCKHFPDENISRMENDNAGKHKEVTACSYMSSENSFFVSEVDFLLRGGETTMVQLSVTPREEGTLEVLGVRWKLLGSIVGFHDFDFNNVKNVLKGKRKGKLSTNENFKFLVIKSIPKLQGSIHPFPDKAYVGDLRHLVLELRNPSEFPVKNLKMKISHPRFLNIGHLESMKSELPACLMKKVDSVPSGANADPFNMSDTVFMFPEGTSVQGATPFAWPLWFRAAFAGNISLYISIYYEIGDISSVIKYRILRLQYNLQVLPSLDVSFQISPSPLRFQEYLVRMDVVNKTASEDFQVNQLSSIGSNWEISLLQPADTIFPSQSLKAGQAISCFLTIKNCRSLSTAKDNISLVPEPVKNDIKLVPQGSEDSVYDTSSEPLVNFHHYERLQQELPHEARGDLSTVDFVLISRPLQRNSNAGFVDHPLVMSHYACHCSTASTGPISWMLDGPRTLHHNFSASFCEINLKMHLHNYSDAIAFVRITTSDSAVNVGHLNSVNMAQSVSSDEQGGWRHVTPVNEVKVTSNISGTEPEEPLSLGSVSPYIWSGSSSTNIHLESMSSAEIPLQICVFSPGIYDLSNYALHWNLLLGEGPGDRDETGQQSGKCLGYTYYLTVLQST 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1040 1293 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 187 524 IPR024420 -
Lele07g1040 1293 PANTHER TRANSPORT PROTEIN TRAPP 3 1292 IPR024420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1040 Lele-ChrLele07 6255691 6273401 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1040 07 6255691 6273401 Lele07g1040 07 6255691 6273401 ECH
Lele05g1004 05 6195583 6204081 Lele07g1040 07 6255691 6273401 hybridization
Lele06g0862 06 5350575 5362918 Lele07g1040 07 6255691 6273401 hybridization