Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0999 ATGATGGAGCGTTCGGCGGCAGTGTGGCAAGGAGCAACGCTCGGTGGATTATGCTTCTGGATTGTGTCATCTTCATACCTCAATGTGACTCGCAGGTTTAGATCTTTCCTTCAGCCCTGGGTAATTCACCATGTCGAATCTGGAACCTCTATTGTCCTTCAGATCCAGAGTTACAGGCTTGGAATTCTGGACGCTTTTTTCTCTGGATTATGTTGCATTGTTTCCGTTCCCTTTTACACAGCTTTTCTTCCTCTGAGTGGATATTGCAAATTGGCAAGGCAGCTAACGTTGCTGATCGCGTTCTCTGATTATGTTGGTAATTGTGTAAAGGATGTGGTATCAGCTCCAAGACCTGCTTCTCCGCCTGTTCGGAGACTAACAGCCACAAAAGATGAAGAAGACAATGCATTAGAATATGGGCTGCCTTCATCTCATACTCTTAATACCGTCTGCTTATCTGGCTACATTGTGCACTATATCCTGACTGATACTCAAATTCAAGGTACTTATGCTAGTGTACTTGGAGTTGTCTTTTCTAGCTTACTCGTGGCTTTCATTGGTTTGGGAAGAATTTATCTTGGCCTGCACAGTTTGGTCGATGTCATTGGTGGTGTTTTCATTGGACTCGGAACCCTTGCATTTTGGCTTCACATTGATGAATACCTAGACAGTTTTTTAACCTCCGGACAAAATGTCACATCATTTTGGGTGGCCTTGAGCATACTCTTGCTCTTTGCTTACCCAACTCCCGAACTTCCAACTCCAAGCTTTGAGTTTCACACTGCATTCAACGGTGTTGCATTGGGAATTGTCGCAGGAGTACAGCAGACATACCATCAATTTCACCATGACTCTGTACCACGTGTGTTCTCTTCAGAACTCGCAATCACAGTACCTGAATTTGTAGGAAGAATGCTTGTGGGACTACCTACAATCCTGATCGTGAAATTCTGTAGCAAGGCTCTTGCAAAATGGACTCTTCCTGTGGTATCAAACACCTTGGGCATCCCAATAAAATCAACAAGTTATATCCCAACACTGAGAGAATCTTTCCAGGGAAAGAAGTCTGATAAACTCAAACAGGCTTATTTGCAAAAGCTGCTTTCCCAGTATCAGGTATTTGATATTGATACCGGAATTAGATTTCTTCAGTATACGGGTCTTGCATGGTCCGTCGTTGACCTTGTGCCGGCGCTTTTTTCACATCTGAGCTTGTGA 1218 0.4384 MMERSAAVWQGATLGGLCFWIVSSSYLNVTRRFRSFLQPWVIHHVESGTSIVLQIQSYRLGILDAFFSGLCCIVSVPFYTAFLPLSGYCKLARQLTLLIAFSDYVGNCVKDVVSAPRPASPPVRRLTATKDEEDNALEYGLPSSHTLNTVCLSGYIVHYILTDTQIQGTYASVLGVVFSSLLVAFIGLGRIYLGLHSLVDVIGGVFIGLGTLAFWLHIDEYLDSFLTSGQNVTSFWVALSILLLFAYPTPELPTPSFEFHTAFNGVALGIVAGVQQTYHQFHHDSVPRVFSSELAITVPEFVGRMLVGLPTILIVKFCSKALAKWTLPVVSNTLGIPIKSTSYIPTLRESFQGKKSDKLKQAYLQKLLSQYQVFDIDTGIRFLQYTGLAWSVVDLVPALFSHLSL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0999 405 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 17 231 - -
Lele07g0999 405 SMART acid_phosph_2 92 216 IPR000326 -
Lele07g0999 405 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 21 337 - -
Lele07g0999 405 Pfam PAP2 superfamily 95 219 IPR000326 -
Lele07g0999 405 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 49 223 IPR036938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0999 Lele-ChrLele07 6015241 6018556 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0999 07 6015241 6018556 Lele14g1500 14 23196305 23198856 CCT
Lele07g0999 07 6015241 6018556 Lele15g0845 15 4908196 4912410 CCT
Lele07g0999 07 6015241 6018556 Lele16g0865 16 4876011 4878549 CCT
Lele07g0999 07 6015241 6018556 Lele07g0999 07 6015241 6018556 ECH
Lele05g0959 05 5936873 5939937 Lele07g0999 07 6015241 6018556 hybridization
Lele06g0825 06 5100359 5107310 Lele07g0999 07 6015241 6018556 hybridization