Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0963 ATGAGAAAAGTCAAGTTCGATAAATTTGATTTGAGAATTGAGAGCCACGGGGGCCTGCACTATTTGGACGGAAAGAGCAAGTTGAGGAGGGAAAAAAAGCATAAATACGAGCCGCCTCCCTCGTTCTTTTTTACCCGACTCAGTCTCAGGGACGGCAGCGTGTTCCCTAACTCATTCTGTTCAGAAGCAGGGAGGAGACACCAGTTTCAGAGTTCTCACCATCCTCTTCCGCTTCAGACGGATTGGGTCAAAATGGGAGCAGGTGGCCGAACATCCGTTCCTCCGGCCCAGAGGAAAACTGAGCCTATGAAGAGAAGCCCTGTGGAGCAGCCCCCGTTCACAGTGGGCCAGATCAAGAAAGCCGTGCCGCCTCACTGTTTCAACCGTTCTGTGGCGCGCTCATTCTCCTATGTCCTTTACGACCTTACCATAGCCTTCAGCCTCTATTATGTCGCCACCCATTACTTCCATCTCCTCCCACGGCCTCTCTCTTTCTTGGCCTGGCCAATCTACTGGGCCATTCAAGGCTGCGTCCTCACTGGCGTCTGGGTGGTTGCTCATGAGTGCGGCCACCACGCCTTCAGCGACTACCAATGGCTTGATGACACCGTTGGCTTTGTCCTCCACTCATCCCTCCTCGTCCCTTACTTCTCATGGAAATACAGCCATCGCCGGCATCACTCTAACACCGGATCCCTTGAGCGCGACGAAGTCTTCGTGCCAAAGAAAAGGTCTGGTCTTAGCTGGTACTCTAAATACCTTAACAATCCACCTGGCCGAGTCCTAACCCTTACTGTTACCCTCACTCTTGGCTGGCCTCTCTACCTAGCTTTGAACGTTTCAGGAAGGCCTTATGATCGTTTTGCTTGCCACTATGATCCAAACGGCCCCATTTTCTCAGATCGTGAGCGGCTACAAATATACTTATCAGATGCAGGGGTGCTCGCCGTGTTCTATGGGCTTTACCGTCTTGCGGTGGCGTATGGACTTGCCTGGGTTGTGTGTGTTTATGGAGTGCCATTGCTGGTGGTTAATGGATTTTTGGTGTTGATCACTTATCTGCAGCATACTCACCCTGCATTGCCGCACTATGATTCCTATGAGTGGGGCTGGTTGAAGGGAGCTTTAGCCACGGTAGACAGAGATTATGGTATCTTGAACAAGGTTTTCCATAACATTACAGACACCCATGTAGCACATCACCTGTTCTCCACGATGCCTCATTATCACGCGATGGAGGCTACAAAGGCGATCAAGCCAGTTTTGGGAGAGTATTATCAGTTTGATGGAACACCAGTTTATAAGGCAGTGTGGAGGGAGGCTAAGGAATGCATTTACGTTGAGCCAGATGAAGGTGCGGAGACCAAAGGTGTATTCTGGTACAAGAACAGGCTCTGA 1398 0.5072 MRKVKFDKFDLRIESHGGLHYLDGKSKLRREKKHKYEPPPSFFFTRLSLRDGSVFPNSFCSEAGRRHQFQSSHHPLPLQTDWVKMGAGGRTSVPPAQRKTEPMKRSPVEQPPFTVGQIKKAVPPHCFNRSVARSFSYVLYDLTIAFSLYYVATHYFHLLPRPLSFLAWPIYWAIQGCVLTGVWVVAHECGHHAFSDYQWLDDTVGFVLHSSLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKRSGLSWYSKYLNNPPGRVLTLTVTLTLGWPLYLALNVSGRPYDRFACHYDPNGPIFSDRERLQIYLSDAGVLAVFYGLYRLAVAYGLAWVVCVYGVPLLVVNGFLVLITYLQHTHPALPHYDSYEWGWLKGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPVLGEYYQFDGTPVYKAVWREAKECIYVEPDEGAETKGVFWYKNRL 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0963 465 CDD Delta12-FADS-like 129 411 - -
Lele07g0963 465 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 89 463 - -
Lele07g0963 465 Pfam Fatty acid desaturase 167 427 IPR005804 GO:0006629
Lele07g0963 465 MobiDBLite consensus disorder prediction 89 110 - -
Lele07g0963 465 Pfam Domain of unknown function (DUF3474) 101 148 IPR021863 GO:0016717
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0963 Lele-ChrLele07 5772829 5776706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0963 85 465 Lipid Metabolism Gene Families AT3G12120 75.718 0.0 629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0963 07 5772829 5776706 Lele07g0963 07 5772829 5776706 ECH
Lele05g0925 05 5697660 5702514 Lele07g0963 07 5772829 5776706 hybridization
Lele06g0786 06 4867194 4872094 Lele07g0963 07 5772829 5776706 hybridization