Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0913 ATGATGCTAGGGATTACATCGATGCAGCCCTTGGCTTTGATTCTTCCTTCACGAGAGCCACATCGCAATCAAACTAACCTGTTTGGTGTTTGTGATGATACAGTACTCAGGTGTTCAAAGATGACAGTCACGCCAAAGATCTCCGTTAACGATGGGAACCTGGTTGTCCATGGGAAGACCATACTGACTGGAGTACCAGATAACATTATTCTGACACCAGGATCTGGAGTGGGCCTTGTTGGTGGTGCATTTCTAGGTGCCACAGCTTCCCACAGCAAAAGTCTCCATGTCTTCCCTATGGGTATCTTAGAGGGCCTTCGTTTCATGTGCTGTTTCCGGTTCAAGTTATGGTGGATGACTCAGAGGATGGGAACTTGTGGGAGGGATATCCCTTTGGAGACCCAGTTCATGCTGATAGAGAGCAAAAATGATGAAGCTGCTGATCACGAGAATTCTCCAACCAACTACACTGTCTTGCTTCCTCTCCTGGAAGGCCCGTTCCGTGCTGTTCTACAAGGGAATGACAAAAATGAGATAGAGATTTGCCTTGAGAGTGGAGACAATGCTGTCGAGACGAGTCAAGGTCTTCACCTGGTCTACATGCATGCTGGGACAAACCCCTTTGAAGTCATTAACCAAGCCGTCAAGGCTCTAGAAAAACACATGAAAACATTCCTTCATCGCGAGAAGAAAAAATTGCCATCTTTTCTCGACTGGTTTGGCTGGTGCACATGGGATGCCTTCTATACTGATGTTACGGCAGAGGGTGTCGAGGAAGGCCTGAAAAGCTTATCAGAGGGTGGCACGCCACCACGCTTCCTTATCATAGATGATGGCTGGCAACAAATTGAAAGTAAACCAAAGGAGGCCGATTGCGTTGTTCAAGAAGGAGCACAGTTTGCCACTAGGTTGACTGGTATAAAGGAAAACGATAAATTTCAGAAGAATGGACAGAATACCGAACAGACTTCAGGCCTGAAGCATGTAGTAGATGAAGCGAAGCAACATCACAATGTCAAATATGTATATGTATGGCATGCTCTAGCTGGTTATTGGGGTGGAGTGAAGCCAGCAGCCAGCGGCATGGAACATTATGACACTTCCTTAGCATACCCAGTACAGTCTCCGGGCGTACTAGGAAACCAACCCGACATTGTCATGGACAGCTTGGCTGTACATGGCTTGGGTCTAGTGCATCCCAAGAAGGTTTATAACTTCTACAATGAACTCCATGCTTACTTAGCTTCATGTGGGGTAGATGGAGTAAAAGTTGATGTTCAGAACATTATTGAAACCCTTGGAGCTGGACATGGTGGCAGAGTCTCACTCACACGCAGCTATCATCAGGCCCTCGAGGCCTCCGTGGCTCGTAACTTTCCTGACAACGGATGCATTGCGTGCATGTGTCACAATACTGATGGGCTATATAGTGCTAAGCAGACTGCTGTTGTGAGAGGGTCTGATGACTTTTACCCACACGATCCTGCTTCCCACACTATCCATATATCATCTGTAGCATACAACACACTGTTTCTTGGAGAATTCATGCAGCCTGACTGGGATATGTTCCATAGTTTACACCCAGCAGCAGAGTACCATGCTGCAGCTCGTGCACTTGGTGGATGTGCAATTTATGTCAGTGATAAGCCAGGCAACCACAATTTTGAACTTCTGAGGAGGCTGGTTCTGCCAGATGGATCGGTTCTTCGTGCTCAGCTACCAGGCAGACCGACTCGTGATTCTCTCTTTACTGATCCAGCTAGAGATGGGACTAGCTTGCTCAAAATATGGAACATGAACAAATGCTCTGGAGTGGTTGGAATATTTAACTGCCAAGGTGCTGGGTGGTGCAATATAGAGAAGAAGACCCGGATCCATGATGCATCTCCTGGTACACTCACAGGTTCTGTTCGTGCTTCTGATGTTGATCTCATCGCTCAAGTGGCTGGTGCCGATTGGGATGGCGACGCTATTGTTTATTCCTACAAATCAGGTGAGGTGATTAGGCTACCTAAAGCTGCTTCAGTGCCAGTGACATTGCAAGTTTTGGAGTATGAACTACTCCATTTCTGTCCAGTGAAGAAAATTGGTCCAAGTATTTCGTTTGCGGCAATAGGGCTATTGGACATGTTCAACACTGGAGGAGCCGTAGAGCAGGTTGAAATCCAAAAAGCTAGTGACAAAGAAGAACAGGTATTTGACGGTGAGGTTGAATCTGAGGTGACCACTGTTCTCAGTTCAAACCGATCAGCAACGGCAAGTATTGCCCTCAAAGTGAGGGGAACTGGGAGGTTCGGACTGTACTCGTCGCAGCGACCATTGAAATGTACAGATGGCCCATAG 2343 0.4712 MMLGITSMQPLALILPSREPHRNQTNLFGVCDDTVLRCSKMTVTPKISVNDGNLVVHGKTILTGVPDNIILTPGSGVGLVGGAFLGATASHSKSLHVFPMGILEGLRFMCCFRFKLWWMTQRMGTCGRDIPLETQFMLIESKNDEAADHENSPTNYTVLLPLLEGPFRAVLQGNDKNEIEICLESGDNAVETSQGLHLVYMHAGTNPFEVINQAVKALEKHMKTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSEGGTPPRFLIIDDGWQQIESKPKEADCVVQEGAQFATRLTGIKENDKFQKNGQNTEQTSGLKHVVDEAKQHHNVKYVYVWHALAGYWGGVKPAASGMEHYDTSLAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVYNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASVARNFPDNGCIACMCHNTDGLYSAKQTAVVRGSDDFYPHDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHAAARALGGCAIYVSDKPGNHNFELLRRLVLPDGSVLRAQLPGRPTRDSLFTDPARDGTSLLKIWNMNKCSGVVGIFNCQGAGWCNIEKKTRIHDASPGTLTGSVRASDVDLIAQVAGADWDGDAIVYSYKSGEVIRLPKAASVPVTLQVLEYELLHFCPVKKIGPSISFAAIGLLDMFNTGGAVEQVEIQKASDKEEQVFDGEVESEVTTVLSSNRSATASIALKVRGTGRFGLYSSQRPLKCTDGP 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0913 780 SUPERFAMILY (Trans)glycosidases 236 562 IPR017853 -
Lele07g0913 780 Gene3D Aldolase class I 238 553 IPR013785 -
Lele07g0913 780 PANTHER - 41 777 IPR008811 -
Lele07g0913 780 Pfam Raffinose synthase or seed imbibition protein Sip1 47 777 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0913 Lele-ChrLele07 5423426 5428203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0913 41 597 Glycoside Hydrolase AT3G57520 82.585 0.0 988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0913 07 5423426 5428203 Lele07g0913 07 5423426 5428203 ECH
Lele05g0873 05 5362462 5372345 Lele07g0913 07 5423426 5428203 hybridization
Lele06g0729 06 4485796 4496169 Lele07g0913 07 5423426 5428203 hybridization