Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0729 ATGGATGCAGAACACGTACGAAGAAGTACAACTGATGAACGTGGCTCAAAATATCTTCACAGTTGCGCTCTGATCTGTTCGGACAGCATCTTCCATCTAGCTCGCTTTTGTTTCTTCTTTGAATTGATCTCGGAGCTACTTCCAAAGACTTCGTTCCAGCGGCGGATATATACCGTACTCAGGTGTTCAAAGATGACAGTCACGCCAAAGATCTCCGTTAAAGATGGGAACCTGGTTGTCCATGGGAAAACCATACTGACTGGAGTACCAGATAACATCGTCCTGACCCCAGGATCTGGAGTGGGCCTTGTTGCTGGTGCCTTTATAGGTGCCACAGCTTCCCACAGCAAAAGTCTCCATGTCTTCCCCATGGGTATCTTAGAGGGCCTTCGTTTCATGTGCTGTTTCCGGTTCAAGTTATGGTGGATGACTCAGAGGATGGGAACTTGTGGGCAGGATATCCCTTTGGAGACCCAATTCATGCTGATAGAGAGCAAAAATGATGAAGCTGCTGATCAGGAGAATTCTCCAACCATCTACACTGTCCTGCTTCCTCTCCTGGAAGGCCCGTTCCGTGCTGTTCTACAAGGGAATGACAAAAATGAGATAGAGATTTGCCTTGAGAGTGGAGACAATGCTGTGGAGACGAGCCTAGGTCTTCACCTGGTCTACATGCATGCTGGGACAAACCCCTTTGAAGTCATTAACCAAGCCGTCAAGGCTCTAGAAAAACATATGAAAACATTCCTTCATCGCGAGAAGAAAAAATTGCCATCTTTTCTCGACTGGTTTGGCTGGTGCACATGGGATGCTTTCTATACGGATGTCACGGCAGAGGGTGTCGAGGAAGGCCTGAAAAGCTTATCAGAGGGTGGCACGCCACCACGCTTCCTTATCATAGATGATGGCTGGCAACAAATTGAAAGTAAACCAAAGGATGCCGACTGTGCCATTCAAGAAGGAGCACAGTTTGCCACTAGGTTGACTGGTATAAAAGAAAACGCTAAATTTCAGAAGAATGGACAGAATACCGAACAGACTTCGGGCCTAAAGCATTTAGTAGATGAAGCGAAGCAACATCACAATTTGAAATATGTATATGTATGGCATGCTCTAGCTGGTTATTGGGGTGGAGTGAAGCCAGCAGCCAGTGGTATGGAACATTATGTCACTTCCTTAGCATACCCAGTACAGTCTCCGGGCATACTAGGAAACCAACCAGACATTGTCATGGACAGCTTGGCTGTACATGGCTTGGGTTTAGTGCATCCCAAGAAGGTTTATAACTTCTACAACGAGCTCCATGCTTACTTAGCTTCATGTGGAGTAGATGGAGTAAAAGTTGATGTTCAGAACATTATTGAAACCCTTGGAGCTGGACATGGTGGCAGGGTCTCGCTCACACGCAGCTACCATCAAGCCCTTGAGGCCTCCGTGGCCTGTAACTTTCCTGATAATGGATGCATTGCGTGTATGTGTCACAATACTGATGGGCTATATAGTGCTAAGCAGACTGCTGTTGTGAGAGCGTCTGATGACTTTTACCCACGTGATCCCGCTTCCCACACTATCCATATATCATCTGTAGCATACAACACACTGTTCCTTGGAGAATTCATGCAGCCTGACTGGGATATGTTCCATAGTTTACACCCAGCAGCAGAGTACCATGCTGCAGCTCGTGCAGTTGGTGGATGTGCAATTTATGTCAGTGATAAGCCAGGCAACCACAATTTTGATCTTTTGAGGAAGCTGGTTCTGCCTGATGGATCGGTTCTTCGCGCACAGCTACCAGGCAGGCCCACTCGTGATTCTCTCTTCACTGATCCAGCTAGAGATGGGACTAGCTTGCTCAAAATATGGAACTTAAACAAATGCTCTGGAGTGGTTGGGATATTTAACTGTCAAGGTGCTGGGTGGTGCAAGATAGAGAAGAAGACTCGGATCCATGATGCATCTCCTGGTACACTCACAGGTTCTGTTCGTGCTTCTGATGTCGATCCAATTGCTCAAGTGGCTGGTGCCAATTGGGATGGCGAGGTTATCGTTTATTCCTACAAAACAGGCGAGGTGATAAGGCTACCAAAAGATGCTTCAGTGCCGGTGACATTGCAAGTTTTGGAGTATGAACTATTTCATTTCTGTCCAGTGAAGAAAATTGGTCCAAGTATTTCGTTTGCAGCAATAGGGCTACTGGACATGTTCAACACTGGAGGAGCCGTTGAGCAGGTTGAATTCCACAAGGCTAGTGACAAAGAAGAACAAGTATTTGATGGTGAGATTGAATCTGAGCTGACCGCTTGTCTCAGTTCAGAGCGATCAGCAACGGCAACTATTGCTCTCAAAGTGAGAGGAACTGGGAGATTCGGAGTGTACTCGTCGCAGCGGCCATTGAAGTGTGTTGTAGGAGAGGCCGAAACGGATTTGGATTTCGAATATGAATCGGCCACTGGGTTGGTCACCATCACCATCCCACTTCCTTCTCAGGAAACGTACAGATGGCCCATACAAATCCAAGTTTGCGTAATTTAG 2532 0.4688 MDAEHVRRSTTDERGSKYLHSCALICSDSIFHLARFCFFFELISELLPKTSFQRRIYTVLRCSKMTVTPKISVKDGNLVVHGKTILTGVPDNIVLTPGSGVGLVAGAFIGATASHSKSLHVFPMGILEGLRFMCCFRFKLWWMTQRMGTCGQDIPLETQFMLIESKNDEAADQENSPTIYTVLLPLLEGPFRAVLQGNDKNEIEICLESGDNAVETSLGLHLVYMHAGTNPFEVINQAVKALEKHMKTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSEGGTPPRFLIIDDGWQQIESKPKDADCAIQEGAQFATRLTGIKENAKFQKNGQNTEQTSGLKHLVDEAKQHHNLKYVYVWHALAGYWGGVKPAASGMEHYVTSLAYPVQSPGILGNQPDIVMDSLAVHGLGLVHPKKVYNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASVACNFPDNGCIACMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHAAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDSLFTDPARDGTSLLKIWNLNKCSGVVGIFNCQGAGWCKIEKKTRIHDASPGTLTGSVRASDVDPIAQVAGANWDGEVIVYSYKTGEVIRLPKDASVPVTLQVLEYELFHFCPVKKIGPSISFAAIGLLDMFNTGGAVEQVEFHKASDKEEQVFDGEIESELTACLSSERSATATIALKVRGTGRFGVYSSQRPLKCVVGEAETDLDFEYESATGLVTITIPLPSQETYRWPIQIQVCVI 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0729 843 Pfam Raffinose synthase or seed imbibition protein Sip1 71 823 IPR008811 -
Lele06g0729 843 PANTHER - 65 836 IPR008811 -
Lele06g0729 843 Gene3D Aldolase class I 262 576 IPR013785 -
Lele06g0729 843 SUPERFAMILY (Trans)glycosidases 260 586 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0729 Lele-ChrLele06 4485796 4496169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0729 65 621 Glycoside Hydrolase AT3G57520 82.406 0.0 988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0729 06 4485796 4496169 Lele06g0729 06 4485796 4496169 ECH
Lele06g0729 06 4485796 4496169 Lele07g0913 07 5423426 5428203 hybridization
Lele06g0729 06 4485796 4496169 Lele08g0728 08 4516224 4522396 hybridization