Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0873 ATGGCCCTCCCTTACCAGCATTTCATTTCAGATTTTGGGCCAAATGGGTCTCTGTGGGGACCCATTTTTGAAGAAGGAGGTGGCGACGACAGATCTGAAATCAAAACGCCCACAAACAAGAACCAGAAGGAACAATACTCGAAATCAAAAGAATTAGAAGGTATCGATAGCATATCTGAAATCGAAGTGGCTGTCATCGCTGGTGGAGGCGAAGCGAAGTTGCAGATCGAAGGACGCTGTCTTCCAGGAGTTAGAGCCGTTTGGTGTCGGCGCCGTCTTCCATCATCCATGCCAGAGTCACCCTCAAAAGAGTCGCGTCGCCATCTTCCATTATCCACGCCGCAGTCACTGCTGTCCTTCGCCCTCGCTTTTGTTTCTTCTCTTAATTCTCCGAGTTACTACAAAATTAAAGACTTCGTTCCCGCGGCGGATATATACCGTACCAGGTTTTCAAAGATGACAGTCACGCCAAAGATCTCCGTTAACGATGGGAACCTGGTTGTCCATGGGAAGACCATACTGACTGGAGTATCAGATAATATTATTATGACACCAGGATCTGGAGTGGGCCTTGTTGGTGGGGCATTCCTAGGTGCCACAGCTTCCCACAGCAAAAGTCTCCATGTCTTCCCCATGGGTATCTTAGAGGGCCTTCGTTTCATGTGCTGTTTCCGGTTCAAGTTATGGTGGATGACTCAGAGGATGGGAACTTGTGGGAGGGATATCCCTTTGGAGACCCAGTTCATGCTGATAGAGAGCAAAAATGATGAAGCTGTTGATCAGGAGAATTCTCCAACCATCTACACTGTCTTGCTTCCTCTCCTGGAAGGCCCGTTCCGTGCTGTTCTACAAGGGAATGACAAAAATGAGTTAGAGATTTGCCTTGAGAGTGGAGACAATGCTGTTGAGACGAGTCAAGGTCTTCACCTGGTCTACATGCATGCTGGGACAAACCCCTTTGAAGTCATTAACCAAGCCGTCAAGGCTGTAGAAAAACACATGAAAACATTCCTTCATCGTGAGAAGAAAAAATTGCCATCTTTTCTCGACTGGTTTGGCTGGTGCACATGGGATGCCTTCTATACTGATGTTACGGCAGAGGGTGTCGAGGAAGGCCTGAAAAGCTTATCAGAGGGTGGCACGCCACCACGCTTCCTTATCATAGATGATGGCTGGCAACAAATTGAGAGTAAACAAAAGGAGGCCGACTGCGTTGTTCAAGAAGGAGCACAGTTTGCCACTAGGTTGACTGGTATAAAGGAAAACGCTAAATTTCAGAAGAATGGACAGAATACCGAACAGACTTCTGGCCTGAAGCATGTAGTAGATGAAGCGAAGCAACATCACAATGTGAAATATGTATACGTATGGCATGCTCTAGCTGGTTATTGGGGTGGAGTGAAGCCAGCAGCCAGTGGCATGGAACATTATGACACTTCCTTAGCATACCCAGTACAGTCTCCGGGCGTACTAGGAAACCAACCAGACATTGTCATGGACAGCTTGGCTGTACATGGCTTGGGTCTAGTGCATCCCAAGAAGGTTTATAACTTCTACAATGAACTCCATGCTTACTTAGCTTCATGTGGGGTAGATGGAGTAAAAGTTGATGTTCAGAACATTATTGAAACCCTTGGAGCTGGACATGGTGGCAGAGTCTCACTCACACGCAGCTATCATCAGGCCCTCGAGGCCTCTGTGGCTCGTAACTTTCCTGACAATGGATGCATTGCGTGCATGTGTCACAATACTGATGGGCTATATAGTTCTAAGCAGACTGCTGTTGTGAGAGGGTCTGATGACTTTTACCCACGCGATCCTGCTTCCCACACTATCCATATATCATCTGTAGCTTACAACACCCTGTTTCTTGGAGAATTCATGCAGCCTGACTGGGATATGTTCCATAGTTTACACCCAGCAGCAGAGTACCATGCTGCAGCTCGTGCAGTTGGTGGATGTGCAATTTATGTCAGTGATAAGCCAGGCAACCACAATTTTGAACTTCTGAGGAAGCTGGTTCTGCCTGATGGATCGGTTCTTCGTGCTCAGCTACCAGGCAGACCGACTCGTGATTCTCTCTTTACTGATCCAGCTAGAGATGGGACTAGCTTGCTCAAAATATGGAACATGAACAAATGCTCTGGAGTGGTTGGAATATTTAACTGCCAAGGTGCTGGGTGGTGCAAGATAGAGAAGAAGACCCGGATCCATGATGCATCTCCTGGTACACTCACAGGTTCTGTTCGTGCTTCTGATGTTGATCTCATCGCTCAAGTGGCTGGGGCCGATTGGGATGGCGAGGCTATTGTTTATTCCTACAAATCAGGTGAGGTGATTAGGCTACCTAAAGCTGCTTCAGTGCCAGTGACATTGCAAGTTTTGGAGTATGAACTACTCCATTTCTGTCCCGTGCAGACAATTGGTCCAAGCATTTCGTTTGCGGCAATAGGGCTATTGGACATGTTCAACACTGGAGGAGCCGTAGAGCAGGTTGAAATCCAAAAGGCTAGTCACAAAGAAGAACAAATATTTGACGGTGAAGTTGAATCTGAGGTGACCACTGGTCTCAGTTCAAACCGATCAGCAACGGCAAGTATTGCCCTCAAAGTAAGGGGAACTGGGAGATTCGGACTGTACTCGTCGCAGCGACCATTGAAGTGTGTTGTAGGAGAGGCTGAAACGGATTTCGACTATGACTTGGCCACTGGGTTGGTGACCTTCGCCATCCCAGTTCCTTCTGAGGAAATGTACAGATGGCCCATAGAAATCCAAGTTTGA 2781 0.475 MALPYQHFISDFGPNGSLWGPIFEEGGGDDRSEIKTPTNKNQKEQYSKSKELEGIDSISEIEVAVIAGGGEAKLQIEGRCLPGVRAVWCRRRLPSSMPESPSKESRRHLPLSTPQSLLSFALAFVSSLNSPSYYKIKDFVPAADIYRTRFSKMTVTPKISVNDGNLVVHGKTILTGVSDNIIMTPGSGVGLVGGAFLGATASHSKSLHVFPMGILEGLRFMCCFRFKLWWMTQRMGTCGRDIPLETQFMLIESKNDEAVDQENSPTIYTVLLPLLEGPFRAVLQGNDKNELEICLESGDNAVETSQGLHLVYMHAGTNPFEVINQAVKAVEKHMKTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSEGGTPPRFLIIDDGWQQIESKQKEADCVVQEGAQFATRLTGIKENAKFQKNGQNTEQTSGLKHVVDEAKQHHNVKYVYVWHALAGYWGGVKPAASGMEHYDTSLAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVYNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYHQALEASVARNFPDNGCIACMCHNTDGLYSSKQTAVVRGSDDFYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHAAARAVGGCAIYVSDKPGNHNFELLRKLVLPDGSVLRAQLPGRPTRDSLFTDPARDGTSLLKIWNMNKCSGVVGIFNCQGAGWCKIEKKTRIHDASPGTLTGSVRASDVDLIAQVAGADWDGEAIVYSYKSGEVIRLPKAASVPVTLQVLEYELLHFCPVQTIGPSISFAAIGLLDMFNTGGAVEQVEIQKASHKEEQIFDGEVESEVTTGLSSNRSATASIALKVRGTGRFGLYSSQRPLKCVVGEAETDFDYDLATGLVTFAIPVPSEEMYRWPIEIQV 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0873 926 MobiDBLite consensus disorder prediction 26 49 - -
Lele05g0873 926 Gene3D Aldolase class I 350 664 IPR013785 -
Lele05g0873 926 MobiDBLite consensus disorder prediction 20 49 - -
Lele05g0873 926 PANTHER - 153 923 IPR008811 -
Lele05g0873 926 SUPERFAMILY (Trans)glycosidases 348 674 IPR017853 -
Lele05g0873 926 Pfam Raffinose synthase or seed imbibition protein Sip1 159 909 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0873 Lele-ChrLele05 5362462 5372345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0873 153 709 Glycoside Hydrolase AT3G57520 82.765 0.0 994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0873 05 5362462 5372345 Lele05g0873 05 5362462 5372345 ECH
Lele05g0873 05 5362462 5372345 Lele07g0913 07 5423426 5428203 hybridization
Lele05g0873 05 5362462 5372345 Lele08g0728 08 4516224 4522396 hybridization