Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0881 ATGTCATTCTTGACTCGTCTCAACACTTCCGCAAGGCCTCTCTTCTCCTCTCTCTTCTGCATCTCACGCCAGAATGGAGGTAGAGATGCAATAACCAGGACGGGCATGAAAACCCGCTCTCTTTCTTCTGTAGTTGAAGCTTCAGATTTAGAATGCGACCAGATCTATGAGGAAGTGAAGGCAACAGAGAAAGATTCTGCACTACGCTTAGCTGTTTCACAACTTGCTAATGAGTTTACCATAGAGTCAATGTTATCTTTGCGGAAGTTTTTTTGTACACGTCGTGCACATGTGATTTCTACAGGCTCCCTGAAGCTGGACCTAGCTCTTGGAGTTGGAGGGTTAGCAAAGGGCAGAATTGTGGAAATTTATGGACGGGAAGCAGCTGGCAAGACAACACTTGCACTTCAAGTTGTAAAAGAAGCTCAGAAGCTTGGAGGATATTGTGCATATCTTGACGTAGAAAATGCATTGGACCTTTCACTTGTAGAATCAATTGGTGTAAATACTGAAAACCTTCTTGTCTCACATCCTGATTGTGCTGAAAACTTGTTGAGCATGGTGGATACATTGACGAAAAGTGGAGCTGTGGATGTAATTGTGATTGACAGTGTTGCTGCCCTGGTCCCAAAACTTGAACTTGATCAAGTAGGAGTTGGCTATAAACGAGATTTACTGAAGCAATTAATGACTCAAGCTCTACGGAAAATTCATTATTCACTTTCTCACTCTCGAACTCTTATCATTTTCATTAATCAGGTTAGATTAAGTCCAAAATCAGGTCAGGCAAATGGACCTGTTGAAGAGGTTACTTGTGGTGGAAATGCCTTAGGATTCTATGCAGCTGTACGCTTGAGACTTTCAAGAATGGGGCTGTTGAAAAATGACGATCAGCCAGAGGGCCTTGCAGTCTGCGCGCAAGTGGTAAAGAATAAACTGGCACCTGCAATGAAAAAGGCTGAATTGGGGATCAAGTTTGGAAGAGGATTTTGCCTTGAAACTGAGGTCTTAGAGTTGGCTTGTGAGCATGGAGCGATCATGAAACAAGGAGACAGATACTTTATCGAAGGTTTGGCATTTGATAGTAAACTTGCAGCTGAACATTATTTGGCTGAAAATGACGAGATTCTTGATAAATTGGTCGTGAACTTGAGGCGAGTCTTGTTTTAA 1170 0.4248 MSFLTRLNTSARPLFSSLFCISRQNGGRDAITRTGMKTRSLSSVVEASDLECDQIYEEVKATEKDSALRLAVSQLANEFTIESMLSLRKFFCTRRAHVISTGSLKLDLALGVGGLAKGRIVEIYGREAAGKTTLALQVVKEAQKLGGYCAYLDVENALDLSLVESIGVNTENLLVSHPDCAENLLSMVDTLTKSGAVDVIVIDSVAALVPKLELDQVGVGYKRDLLKQLMTQALRKIHYSLSHSRTLIIFINQVRLSPKSGQANGPVEEVTCGGNALGFYAAVRLRLSRMGLLKNDDQPEGLAVCAQVVKNKLAPAMKKAELGIKFGRGFCLETEVLELACEHGAIMKQGDRYFIEGLAFDSKLAAEHYLAENDEILDKLVVNLRRVLF 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0881 389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 328 IPR027417 -
Lele07g0881 389 SMART AAA_5 117 291 IPR003593 -
Lele07g0881 389 Pfam recA bacterial DNA recombination protein 67 330 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele07g0881 389 ProSiteProfiles RecA family profile 1. 95 254 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Lele07g0881 389 PRINTS RecA protein signature 153 182 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele07g0881 389 PRINTS RecA protein signature 273 301 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele07g0881 389 PRINTS RecA protein signature 359 376 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele07g0881 389 PRINTS RecA protein signature 187 216 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele07g0881 389 PRINTS RecA protein signature 306 335 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele07g0881 389 PRINTS RecA protein signature 225 254 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele07g0881 389 Gene3D - 94 385 IPR027417 -
Lele07g0881 389 PANTHER RECA 51 388 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele07g0881 389 ProSiteProfiles RecA family profile 2. 261 335 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0881 Lele-ChrLele07 5189414 5193646 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0841 05 5128573 5132808 Lele07g0881 07 5189414 5193646 hybridization
Lele06g0691 06 4215589 4219586 Lele07g0881 07 5189414 5193646 hybridization