Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0841 ATGAAAATGTCATTCTTGACTCGTCTCAACACTTCCGCAAGGCCTATCTTCTCCTCTCTCTTCTGCATCTCACGCCAGAATGGAGGTAGAGATGCAATAACCAGGATGGGCATGAAAATCCGCTGTCTTTCTTCTGTAGTTGAAGCTTCAGATTTAGAATGCGACCAGATCTATGAGGAAGTGAAGGCAACAGAGAAAGATTCTGCACTACGCTTAGCTGTTTCTCAACTTGCTAATGAGTTTACCAGAGAGTCAATGTTATCTTTGCGGAAGTTTTTTTGTACACGTCGGGCAGATGTGATTTCTACAGGCTCCCTGAAGCTGGACCTAGCTCTTGGAGTTGGAGGGTTAGCAAAGGGCAGAATTGTGGAAATTTATGGACGGGAAGCAGCTGGCAAGACAACACTTGCACTTCAAGTTGTAAAAGAAGCTCAGAAGCTTGGAGGATATTGTGCATATCTTGACGTAGAAAATGCATTGGACCTTTCACTTGTAGAATCAATTGGTGTAAATACTGAAAACCTTCTTGTCTCACATCCTGATTGTGCTGAAAACTTGTTGAGCATGGTGGATACATTGACGAAAAGTGGAGCTGTGGATGTGATTGTGATTGACAGTGTTGCTGCCCTGGTCCCAAAACTTGAACTTGATCAAGTAGGATTTGGCTATAAACGAGATTTACTGAAGCAATTAATGACTCAAGCTCTACGGAAAATTCATTATTCACTGTCTCACTCTCGAACTCTTATCATTTTCATTAATCAGGTTAGATTAAGTCCAAAATCAGGTCAGGCAAATGGACCTGTTGAAGAGGTTACTTGTGGTGGAAATGCCTTGGGATTCTATGCAGCTGTACGCTTGAGACTTTCAAGAATGGGGCTGTTGAAAAATGACGATCAGCCAGAGGGTCTTGCAGTCTGCGCGCAAGTGGTAAAGAATAAACTGGCACCTGCAATGAAAAAGGCTGAATTGGGGATCAAGTTTGGAAGAGGATTTTGCCTTGAAACTGAGGTCTTAGAGTTGGCTTGTGAGCATGGAGCGATCATGAAACAAGGAGACAGATACTTTATCGAAGGTTTGGCCTTTGATAGTAAACTTGCAGCTGAACATTATTTGGCTGAAAATGACGAGATTATTGATAAATTGGTCGTGAACTTGAGGCGAGTCTTGTTTTAA 1176 0.4235 MKMSFLTRLNTSARPIFSSLFCISRQNGGRDAITRMGMKIRCLSSVVEASDLECDQIYEEVKATEKDSALRLAVSQLANEFTRESMLSLRKFFCTRRADVISTGSLKLDLALGVGGLAKGRIVEIYGREAAGKTTLALQVVKEAQKLGGYCAYLDVENALDLSLVESIGVNTENLLVSHPDCAENLLSMVDTLTKSGAVDVIVIDSVAALVPKLELDQVGFGYKRDLLKQLMTQALRKIHYSLSHSRTLIIFINQVRLSPKSGQANGPVEEVTCGGNALGFYAAVRLRLSRMGLLKNDDQPEGLAVCAQVVKNKLAPAMKKAELGIKFGRGFCLETEVLELACEHGAIMKQGDRYFIEGLAFDSKLAAEHYLAENDEIIDKLVVNLRRVLF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0841 391 SMART AAA_5 119 293 IPR003593 -
Lele05g0841 391 ProSiteProfiles RecA family profile 2. 263 337 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Lele05g0841 391 ProSiteProfiles RecA family profile 1. 97 256 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Lele05g0841 391 PANTHER RECA 53 390 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele05g0841 391 Pfam recA bacterial DNA recombination protein 69 332 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele05g0841 391 PRINTS RecA protein signature 361 378 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele05g0841 391 PRINTS RecA protein signature 155 184 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele05g0841 391 PRINTS RecA protein signature 189 218 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele05g0841 391 PRINTS RecA protein signature 308 337 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele05g0841 391 PRINTS RecA protein signature 275 303 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele05g0841 391 PRINTS RecA protein signature 227 256 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele05g0841 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 330 IPR027417 -
Lele05g0841 391 Gene3D - 96 387 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0841 Lele-ChrLele05 5128573 5132808 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0841 05 5128573 5132808 Lele07g0881 07 5189414 5193646 hybridization
Lele05g0841 05 5128573 5132808 Lele08g0689 08 4241126 4245086 hybridization