Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0691 ATGTCATTATTGACTCACCTCAACACTTTCGCAAGGCCTCTCTGCTCCTGCATCTCACGCCAGGTTCTTCTCAAAACAGTTTCTTTTTCTCCCTCTGTAACTGATAGACTACTGAGCTTTCAAACTCGTGAAGGTTGCAACATACTCCTTGGTTTTCTTTTGGTTGTGGCGCCTTCTTGTAATGGAGGTAGAGATGCAATAACCAGGATGGGCATGAAAACCCGTTCTCTTTCTTCTGTAGTTGAAGCTTCAGATTTTGAATGCGACCATATCCATGAGGATGTGAAGGCAACAGAGAAAGATTCTGCACTATGCCTAGCTGTGTCACAACTTGCTAAAGAGTTTACCAGAGAGTCAATGTTATCTTTGCCAAAGTTTTTTTGTACACGTCGTGTACAAGCGATTTCTACTGGCTCCCTGAAGCTGGACCTAGCTCTTGGAGTTGGAGGGTTACCAAAGGGTAGAATTGTGGAAATTTATGGACGAGAAGCAGCTGGCAAGACAACACTTGCACTTCAAGTTGTAAAAGAAGCTCAGAAGCTTGAAGGATATTGTGCATATCTTGACGTAGAAAATGCATTGGACCTTTCACTTGTAGAATCAATTGGTGTAAATACTGAAAACCTTCTTGTCTCACACTCTGATTGTGCTGAAAACTTGTTGAGCATGGTGGATACATTGACGAAAAGTGGAGCTGTGGATGTGATTGTGATTGACAGTGTTGCTGCCCTGGTCCCAAAACTTGAACTTGATCAATTAGGAGTTGGCTATAAACGAGATTTACTGAAGCAATTAATGACTCAAGCGCTACGGAAAATTCATTATTCACTGTCTCACTCTCGAACACTTATCATTTTCATTAATCAGGTTAGATTAAGTCCAAAATCAGGTCAGGCACATGGACCTGTTGAAGAGGTTACTTGTGGTGGAAATGCCTTAGGATTATATGCAGCTGTACGCTTGAGACTTTCAAGAATGGGGCTGTTGAAAAATGATGATCAGCCGGAGGGTCTTGCAGTCTGCGCGCAGGTGGTAAAAAATAAACTGGCGCCTGCAATGAAAAAGGCTGAATTGGGGATCAAGTTTGGAAGAGGATTTTGCCTAGAAACTGAGGTCTTAGAGTTGGCTTGTGAGCATGCAGCGATCCTGCAACATGGAGACAGATACCTTATCGAAGGTTTGGCTTTTGATAGTAAACTTGCAGCTGAACGTTATTTGGCTGAAAATGACGAGATTCTTGATAAATTGGTCGTGGACTTGAGGCGAGTTTTGTTTTAA 1278 0.4241 MSLLTHLNTFARPLCSCISRQVLLKTVSFSPSVTDRLLSFQTREGCNILLGFLLVVAPSCNGGRDAITRMGMKTRSLSSVVEASDFECDHIHEDVKATEKDSALCLAVSQLAKEFTRESMLSLPKFFCTRRVQAISTGSLKLDLALGVGGLPKGRIVEIYGREAAGKTTLALQVVKEAQKLEGYCAYLDVENALDLSLVESIGVNTENLLVSHSDCAENLLSMVDTLTKSGAVDVIVIDSVAALVPKLELDQLGVGYKRDLLKQLMTQALRKIHYSLSHSRTLIIFINQVRLSPKSGQAHGPVEEVTCGGNALGLYAAVRLRLSRMGLLKNDDQPEGLAVCAQVVKNKLAPAMKKAELGIKFGRGFCLETEVLELACEHAAILQHGDRYLIEGLAFDSKLAAERYLAENDEILDKLVVDLRRVLF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0691 425 Gene3D - 130 421 IPR027417 -
Lele06g0691 425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 364 IPR027417 -
Lele06g0691 425 ProSiteProfiles RecA family profile 2. 297 371 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Lele06g0691 425 PANTHER RECA 84 424 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele06g0691 425 Pfam recA bacterial DNA recombination protein 103 366 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele06g0691 425 PRINTS RecA protein signature 223 252 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele06g0691 425 PRINTS RecA protein signature 189 218 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele06g0691 425 PRINTS RecA protein signature 261 290 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele06g0691 425 PRINTS RecA protein signature 342 371 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele06g0691 425 PRINTS RecA protein signature 395 412 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele06g0691 425 PRINTS RecA protein signature 309 337 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lele06g0691 425 SMART AAA_5 153 333 IPR003593 -
Lele06g0691 425 ProSiteProfiles RecA family profile 1. 131 290 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0691 Lele-ChrLele06 4215589 4219586 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0691 06 4215589 4219586 Lele07g0881 07 5189414 5193646 hybridization
Lele06g0691 06 4215589 4219586 Lele08g0689 08 4241126 4245086 hybridization