Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0738 ATGCAGACAAGGTCGGTTCAAGTAAAGAATGTCTCGGATCTAGCTACTGAGAGGGAGATTCACGAATTTTTCTCCTTTTCTGGAGAAATCGAGCACATTGAGATCCAAAGTGAATCCGGGAAATTAAAGACAGCATATGTGACATTTAAAGATCCAAAGGCACTTGAGATTGCGTTATTGTTATCGGGAGCGACAATAGTAGATCAGATTGTGAGTATAACTCCAGCTGAGAACTATGTACCGAAACAAGAGATGCAGGAAGTAATGGTGGTGGCAAATGCAACAAATGTTGCTCCTGTTGAAAATATTACACCATATGTTGAGGAGAAAGCAAACCCCACTGGCAGTGGAAGAATGTATATTAGTAGAGCACAAGATGTAGTCACAAAGAAATTGACAGTTGGCATTTCTGTAGTTAATGAGAAGGTGAAGTATGTTGATCAGAGGCTTCGTGTTTCAGATAAAACGATGGCCACAATACTAGCAGCTGAGAGGAAGTTAAATGATACTGGATCAGCGGTCAAAACAAGAAGGAGAGATGGGAAGGCACTGGTTTCTGTGTTTGTCCTCCTAATCCGTCAGCTGTTTGTTTCATGTGGCAAGCGTTGTGATTCAATTTTATCCGGTGCTTTATTCTTTTGTAACTATGGTTTGTCGATGATGCTTCTTTGTAATTTCAGCAGTGGTAATTCTGGTTTTCATGTGAAAAGGAAAATTATAGATGCAATTTCCTCAAGGATGGATATGACTGTTTCTCCACAAGCATTGTGGACACCTGGTCGCAAAATTTTGTCTGCTAATTCGCTGAAAAATGTGTGGCTTGTTGTGCGAGAAGGATCTCTAAATGATGTAGAGGCAGCCTTGACATTATTAAAGAAGAATGGAATCAATATCAATTCAAGGAACATATTTGGGCTGACCCCTCTTCATAAGGAACCACATCCCCATTGTCAGGAGGCTTCTTGCAGCTGGTGCAGACCCTGA 984 0.4096 MQTRSVQVKNVSDLATEREIHEFFSFSGEIEHIEIQSESGKLKTAYVTFKDPKALEIALLLSGATIVDQIVSITPAENYVPKQEMQEVMVVANATNVAPVENITPYVEEKANPTGSGRMYISRAQDVVTKKLTVGISVVNEKVKYVDQRLRVSDKTMATILAAERKLNDTGSAVKTRRRDGKALVSVFVLLIRQLFVSCGKRCDSILSGALFFCNYGLSMMLLCNFSSGNSGFHVKRKIIDAISSRMDMTVSPQALWTPGRKILSANSLKNVWLVVREGSLNDVEAALTLLKKNGININSRNIFGLTPLHKEPHPHCQEASCSWCRP 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0738 327 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 66 IPR000504 GO:0003723
Lele07g0738 327 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Lele07g0738 327 Gene3D - 1 89 IPR012677 -
Lele07g0738 327 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 3 179 - -
Lele07g0738 327 SUPERFAMILY RNA-binding domain, RBD 3 84 IPR035979 GO:0003676
Lele07g0738 327 CDD RRM_Vip1_like 6 74 IPR034360 -
Lele07g0738 327 SMART rrm1_1 5 74 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0738 Lele-ChrLele07 4154941 4166139 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0695 05 4106958 4115520 Lele07g0738 07 4154941 4166139 hybridization
Lele06g0528 06 3185705 3190874 Lele07g0738 07 4154941 4166139 hybridization