Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0710 ATGGGCGCAAGTCGAAAGCTTCAGGGCGAGATAGATCGCGTTCTCAAGAAGGTCCAAGAAGGTGTCGATGTCTTCGATAGTATCTGGAACAAGGTTTACGATACAGACAATGCTAACCAGAAGGAGAAATTTGAGGCAGACCTGAAGAAAGAGATTAAGAAGCTCCAGAGGTACAGAGACCAAATTAAGACTTGGATACAGTCTAGCGAGATCAAGGATAAGAAGGTTAGTGCCTCTTATGAGCAGGCTCTGGTGGATGCTCGCAAGATCATCGAGCGTGAAATGGAAAGATTTAAGATCTGTGAAAAGGAAACTAAGACCAAAGCGTTCTCCAAAGAAGGCTTGGGCCAACAGCCTAAAACTGATCCAAAGGAGAAGGCTAAATCAGAGACAAGGGATTGGTTGAATAATGTGGTCGGAGAATTAGACTCTCAAATTGATAACTTTGAAGCTGAGCTTGAAGGGCTTTCTGTCAAAAAGGGAAAAAGCAGACCACCTAGATTGACACATCTAGAGATGTCAATTGCTCGACACAAGGCTCATGTAAAAAAATGTGAGTTACTCTTGAGGCTGCTAGACAACGATGAATTAAGTCCTGAGCAGGTTAATGATGTCAAAGATTTCTTGGAAGACTACGTGGAGCGTAATCAGGAGGACTTTGATGAATTCAGTGATGTCGATGAGCTATACAGTTCATTACCTTTAGACAAGGTGGAGTCTCTCGAAGATCTTGTCACAATTGGTCCACCTGCTCTTGCTAAGGGTGCACTTGGTCTTAGCTTGAAGACATCTTTAGCTGCATCAGCTTCGCAAACATCTGAACAAGCTGAAGACACTGCTTCCCAGGATAGCAATTCTGATACTGTTGTCAGAACGCCACCTTCTAAAAGTAGTGGAATCAGTTCTGCTATGTCGACACCATCTGGGAACCATGCTACTCCTGTTTCTTTGAATGTTTCGTCTCAGAACTTGTCTGGTGCAACTGCTGCAGCATCGATCCTCCCTGGTTCAAATTCTGTTCGGACTGCTCTGGAGAATACTGGTGCTACTAATCCTTCATCTGTAAATCCGCCTACCTCTGTGAAAGAAGATGAGGTTAATGGCTTCCCTGGCCGGAGAGCATCTCCACCACTTTCTGATGCTGCACATGCGAGAGGCATCAGTAGAAACAGCCTACCAAATCAAGTGACATCTGGTATCCCTCTTGCTTCCAGCAACATTGTTTCCAGCAATGGGGCCCTTGGTTCGGTCCCTTCAGCCTCTGATATAACTAAGAGGAACTTACTGGGAGCCGATGACAGGCTTGGAAGTAGTGGAATAGGGCAGCCTCTTCTATCACCGCTAAGCAATAGAATGATGTTGCCTCAGGCTGTGAAGGCTAACGATGGAACTGGTTCAGTTGACCCTAATAATGTTAATGAGGCTGCAGCTGTATCTGGGAGAGTTTTTTCCCCTTCTGGTGTTCCTGGCATGCAGTGGAGACCAGGAAGTCCTTTCCAGAACCAGAATGAGACGGGTCAGCTTCGTGGAAGAACTGAAATAGCACCTGATCAGAGAGAAAAGTTTCTGCAGAAGTTTCAGCAAGTGCAGCAACAAGGGCATAGTACCCTTCTTGGTATGCCTTCTCTTGCTGGTGGAAGTCATAAGCAGTTTTCTGCTCAGCCGCAAAATCCTCTCTTGCAGCAGGCATCAGGTCTCAGTAGCATTTCATCCACCTCATTACAGCAGCCATCCAATTCTATCCTTTCTCCATCTAGTCAACAGCCAATGATCTCAAGTGTTTCTCAAGATTCTGATGGCAATTCTAAAGTTGAAGAACATCAGCAACACCAGAATTCTCCTGATGATTCAGTGTCTGAATCTGCTGCCAGTAATGGGCTTGGCAAGAATCTTCTAAATGAAGAGGATTTAAAATCCACATATGCTGTAGATTCTCCTCAGGCAGGAGTGTCTGGTTCTCTTACTGAGCCTGCTCAGAGCTCCAGAGATGCTGATTTCTCTCCTGGCCAACCTTTACAGTCCAATCAACCTTCTGGCAACCTTGGTGTTATTGGAAGAAGAAGTGTCGCTGATTTTGGAGCCATTGGTGATAATCTTAGTGGAACAAATGTCAATTCTGGCGGAGGGCGTGACCATTTATTTAATTTACAGATGCTTGAATCGGCTTACTACAAACTTCCACAACCCAAAGACTCAGAACGTCCGAGGACTTATACTCCTAAGCACCCAGCAATAACACCTCCAAGTTATCCTCAAATACAGGCCCCCATTGTCAGTAATCCTGCCTTTTGGGAGAGAGTAGGTCTTGAACCATATGGCACTGACACCCTGTTCTTTGCATTTTATTATCAACAGAACACTTATCAACAATATTTGGCTGCAAAAGAACTAAAGAAGCAGTCTTGGAGATATCACAGAAAATATAACACATGGTTTCAGAGACATGAAGAGCCAAAAGTCGCTACAGATGAATTTGAGCAGGGAACATATGTATACTTCGATTTTCATATTGCAAACGATGACCTGCAACATGGATGGTGTCAAAGAATCAAGACCGAGTTCACTTTTGAGTATAATTATCTTGAAGATGAGCTTAGTGTATAG 2604 0.4432 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKIIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELDSQIDNFEAELEGLSVKKGKSRPPRLTHLEMSIARHKAHVKKCELLLRLLDNDELSPEQVNDVKDFLEDYVERNQEDFDEFSDVDELYSSLPLDKVESLEDLVTIGPPALAKGALGLSLKTSLAASASQTSEQAEDTASQDSNSDTVVRTPPSKSSGISSAMSTPSGNHATPVSLNVSSQNLSGATAAASILPGSNSVRTALENTGATNPSSVNPPTSVKEDEVNGFPGRRASPPLSDAAHARGISRNSLPNQVTSGIPLASSNIVSSNGALGSVPSASDITKRNLLGADDRLGSSGIGQPLLSPLSNRMMLPQAVKANDGTGSVDPNNVNEAAAVSGRVFSPSGVPGMQWRPGSPFQNQNETGQLRGRTEIAPDQREKFLQKFQQVQQQGHSTLLGMPSLAGGSHKQFSAQPQNPLLQQASGLSSISSTSLQQPSNSILSPSSQQPMISSVSQDSDGNSKVEEHQQHQNSPDDSVSESAASNGLGKNLLNEEDLKSTYAVDSPQAGVSGSLTEPAQSSRDADFSPGQPLQSNQPSGNLGVIGRRSVADFGAIGDNLSGTNVNSGGGRDHLFNLQMLESAYYKLPQPKDSERPRTYTPKHPAITPPSYPQIQAPIVSNPAFWERVGLEPYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEFEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELSV 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0710 867 Coils Coil 139 159 - -
Lele07g0710 867 PANTHER CCR4 NOT-RELATED 24 864 IPR040168 GO:0030015
Lele07g0710 867 Gene3D - 709 862 IPR038635 -
Lele07g0710 867 MobiDBLite consensus disorder prediction 644 682 - -
Lele07g0710 867 MobiDBLite consensus disorder prediction 270 317 - -
Lele07g0710 867 FunFam CCR4-NOT transcription complex subunit 3 isoform X1 707 862 - -
Lele07g0710 867 MobiDBLite consensus disorder prediction 547 599 - -
Lele07g0710 867 Pfam NOT2 / NOT3 / NOT5 family 722 861 IPR007282 GO:0006355
Lele07g0710 867 MobiDBLite consensus disorder prediction 343 361 - -
Lele07g0710 867 MobiDBLite consensus disorder prediction 525 625 - -
Lele07g0710 867 MobiDBLite consensus disorder prediction 488 507 - -
Lele07g0710 867 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Lele07g0710 867 MobiDBLite consensus disorder prediction 343 383 - -
Lele07g0710 867 PIRSF NOT_su_3_5 1 867 IPR012270 GO:0006355|GO:0030015
Lele07g0710 867 Coils Coil 41 61 - -
Lele07g0710 867 MobiDBLite consensus disorder prediction 641 683 - -
Lele07g0710 867 MobiDBLite consensus disorder prediction 110 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0710 Lele-ChrLele07 4016219 4024621 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0710 07 4016219 4024621 Lele07g0710 07 4016219 4024621 ECH
Lele05g0675 05 3971701 3981846 Lele07g0710 07 4016219 4024621 hybridization
Lele06g0498 06 3028009 3036105 Lele07g0710 07 4016219 4024621 hybridization